ClCG00G001050 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTAATGGCGACGATCCCTTCGATTCACTCACCAAACTCTGCATCGTTTCTGACTCTCAAGAAGATATCTTACGTCGCTGCTCTTTCGCCGGCGACCCTAAATCCATCGATGCCTCTGATTTTTCCGCCTCCCAAATCCTTCACCTTCATCCCTCTCATGTTTCCATGCCTTCTCCTCCAGAGAGTTTGGAACAGAGAGAACAAATTACCTCTCGTGATGCCTACCAGCCTCCACCGGAACAGTCCGGCAGACAGCGGCCCATGGCTGTAGATGATCCTTCTCTTCAAGATACGGCGGCAGCCGTTGAAGGCGGATGTGTCCGCGATGTTGCTAGGGGAGTCGATTTGGGGAAGAATAATGACCTAGGGTTTCGTTTTGAAGTTCAATCGAAACAACAGTCGGCTGAAATCGAAATAATCGGCGTTTGTAGAAGAAAGGTTTCAGAGTCTGATGCTGATGGAGAGGCTGAATCTGCATTGAAGAGGTTGAAATTGTCGAATGAAGCTTTGGGCACAGTAGAAAAATTACTCGTCGATCTCGAATTCGGTAAAGAATCGAAACTGATTGATGAATCCGTACGATTCGGTGAAGAATCCGGCAAAATAGATGATGGAAAGATCTCCAATGGCGAAGAAACTCACTGTAACAAGAACAAAGAAAAATTCGCAGAGAAGAAAACCGGAAACTCCCAACCTGAAGAACCGAGCTACTTAGGAGCATTGAATCGCGATCCATGGAGGCACGTTGTGCCATTAACAACGAATGGATCAAATTCGAAGAAGACAGATGATGCAACTTCCCCTGGTGATTCTGGTACGCCCACATCCATTATTATGAAAATCTTAAAGATTCTCTCACAAGAAGAAAGTGAGGAAGACAAGAAATTAGGCAATATGAGCTTTTTGGAAATCGCATTGCATCGTGGAATGACATTTCCTTGGCCGTGTTGGTGGACGGAGGGGGAGGATTTCAGCTCCAAGAAGAACAGTTGA ATGGATGGTAATGGCGACGATCCCTTCGATTCACTCACCAAACTCTGCATCGTTTCTGACTCTCAAGAAGATATCTTACGTCGCTGCTCTTTCGCCGGCGACCCTAAATCCATCGATGCCTCTGATTTTTCCGCCTCCCAAATCCTTCACCTTCATCCCTCTCATGTTTCCATGCCTTCTCCTCCAGAGAGTTTGGAACAGAGAGAACAAATTACCTCTCGTGATGCCTACCAGCCTCCACCGGAACAGTCCGGCAGACAGCGGCCCATGGCTGTAGATGATCCTTCTCTTCAAGATACGGCGGCAGCCGTTGAAGGCGGATGTGTCCGCGATGTTGCTAGGGGAGTCGATTTGGGGAAGAATAATGACCTAGGGTTTCGTTTTGAAGTTCAATCGAAACAACAGTCGGCTGAAATCGAAATAATCGGCGTTTGTAGAAGAAAGGTTTCAGAGTCTGATGCTGATGGAGAGGCTGAATCTGCATTGAAGAGGTTGAAATTGTCGAATGAAGCTTTGGGCACAGTAGAAAAATTACTCGTCGATCTCGAATTCGGTAAAGAATCGAAACTGATTGATGAATCCGTACGATTCGGTGAAGAATCCGGCAAAATAGATGATGGAAAGATCTCCAATGGCGAAGAAACTCACTGTAACAAGAACAAAGAAAAATTCGCAGAGAAGAAAACCGGAAACTCCCAACCTGAAGAACCGAGCTACTTAGGAGCATTGAATCGCGATCCATGGAGGCACGTTGTGCCATTAACAACGAATGGATCAAATTCGAAGAAGACAGATGATGCAACTTCCCCTGGTGATTCTGGTACGCCCACATCCATTATTATGAAAATCTTAAAGATTCTCTCACAAGAAGAAAGTGAGGAAGACAAGAAATTAGGCAATATGAGCTTTTTGGAAATCGCATTGCATCGTGGAATGACATTTCCTTGGCCGTGTTGGTGGACGGAGGGGGAGGATTTCAGCTCCAAGAAGAACAGTTGA ATGGATGGTAATGGCGACGATCCCTTCGATTCACTCACCAAACTCTGCATCGTTTCTGACTCTCAAGAAGATATCTTACGTCGCTGCTCTTTCGCCGGCGACCCTAAATCCATCGATGCCTCTGATTTTTCCGCCTCCCAAATCCTTCACCTTCATCCCTCTCATGTTTCCATGCCTTCTCCTCCAGAGAGTTTGGAACAGAGAGAACAAATTACCTCTCGTGATGCCTACCAGCCTCCACCGGAACAGTCCGGCAGACAGCGGCCCATGGCTGTAGATGATCCTTCTCTTCAAGATACGGCGGCAGCCGTTGAAGGCGGATGTGTCCGCGATGTTGCTAGGGGAGTCGATTTGGGGAAGAATAATGACCTAGGGTTTCGTTTTGAAGTTCAATCGAAACAACAGTCGGCTGAAATCGAAATAATCGGCGTTTGTAGAAGAAAGGTTTCAGAGTCTGATGCTGATGGAGAGGCTGAATCTGCATTGAAGAGGTTGAAATTGTCGAATGAAGCTTTGGGCACAGTAGAAAAATTACTCGTCGATCTCGAATTCGGTAAAGAATCGAAACTGATTGATGAATCCGTACGATTCGGTGAAGAATCCGGCAAAATAGATGATGGAAAGATCTCCAATGGCGAAGAAACTCACTGTAACAAGAACAAAGAAAAATTCGCAGAGAAGAAAACCGGAAACTCCCAACCTGAAGAACCGAGCTACTTAGGAGCATTGAATCGCGATCCATGGAGGCACGTTGTGCCATTAACAACGAATGGATCAAATTCGAAGAAGACAGATGATGCAACTTCCCCTGGTGATTCTGGTACGCCCACATCCATTATTATGAAAATCTTAAAGATTCTCTCACAAGAAGAAAGTGAGGAAGACAAGAAATTAGGCAATATGAGCTTTTTGGAAATCGCATTGCATCGTGGAATGACATTTCCTTGGCCGTGTTGGTGGACGGAGGGGGAGGATTTCAGCTCCAAGAAGAACAGTTGA MDGNGDDPFDSLTKLCIVSDSQEDILRRCSFAGDPKSIDASDFSASQILHLHPSHVSMPSPPESLEQREQITSRDAYQPPPEQSGRQRPMAVDDPSLQDTAAAVEGGCVRDVARGVDLGKNNDLGFRFEVQSKQQSAEIEIIGVCRRKVSESDADGEAESALKRLKLSNEALGTVEKLLVDLEFGKESKLIDESVRFGEESGKIDDGKISNGEETHCNKNKEKFAEKKTGNSQPEEPSYLGALNRDPWRHVVPLTTNGSNSKKTDDATSPGDSGTPTSIIMKILKILSQEESEEDKKLGNMSFLEIALHRGMTFPWPCWWTEGEDFSSKKNS
BLAST of ClCG00G001050 vs. TrEMBL
Match: A0A0A0LT00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042410 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 6.2e-104 Identity = 210/325 (64.62%), Postives = 241/325 (74.15%), Query Frame = 1
BLAST of ClCG00G001050 vs. TrEMBL
Match: A0A0A0L1F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017190 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.6e-21 Identity = 104/335 (31.04%), Postives = 156/335 (46.57%), Query Frame = 1
BLAST of ClCG00G001050 vs. TrEMBL
Match: W9RXT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 92/307 (29.97%), Postives = 133/307 (43.32%), Query Frame = 1
BLAST of ClCG00G001050 vs. TrEMBL
Match: W9RXT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024044 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.0e-02 Identity = 46/174 (26.44%), Postives = 77/174 (44.25%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 8.1e-11 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 1
BLAST of ClCG00G001050 vs. TrEMBL
Match: V4TJ52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020707mg PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 8.1e-11 Identity = 60/196 (30.61%), Postives = 92/196 (46.94%), Query Frame = 1
BLAST of ClCG00G001050 vs. NCBI nr
Match: gi|700209033|gb|KGN64129.1| (hypothetical protein Csa_1G042410 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 8.9e-104 Identity = 210/325 (64.62%), Postives = 241/325 (74.15%), Query Frame = 1
BLAST of ClCG00G001050 vs. NCBI nr
Match: gi|700200692|gb|KGN55825.1| (hypothetical protein Csa_3G017190 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 9.5e-21 Identity = 104/335 (31.04%), Postives = 156/335 (46.57%), Query Frame = 1
BLAST of ClCG00G001050 vs. NCBI nr
Match: gi|659095815|ref|XP_008448781.1| (PREDICTED: uncharacterized protein LOC103490847 [Cucumis melo]) HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19 Identity = 105/351 (29.91%), Postives = 161/351 (45.87%), Query Frame = 1
BLAST of ClCG00G001050 vs. NCBI nr
Match: gi|703131278|ref|XP_010104843.1| (hypothetical protein L484_024044 [Morus notabilis]) HSP 1 Score: 81.3 bits (199), Expect = 3.6e-12 Identity = 92/307 (29.97%), Postives = 133/307 (43.32%), Query Frame = 1
BLAST of ClCG00G001050 vs. NCBI nr
Match: gi|703131278|ref|XP_010104843.1| (hypothetical protein L484_024044 [Morus notabilis]) HSP 1 Score: 47.4 bits (111), Expect = 5.8e-02 Identity = 46/174 (26.44%), Postives = 77/174 (44.25%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 1.2e-10 Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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