ClCG00G000150 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCATTTTCCCATTGCCTTATCTTCCTTTCCTTCCAAACAGGGAGGGAAAATTCATCCACCTTCTTCCAATAATCCTAAACAATTTTCTGCTCCATTTTCCCTCTCCCATGGCGACCAAATTGACGCTCTCCTTACCGTCTTCGAGTTCGCTCACTGTTCCGATTCAAAATCAGAAACCGGCAGCTTCTCTGCTTTCGCCTTCTTCAAGGTCCCAATTGGTTAGGGCTTCTAGCCGGCGATTGTTCCTTCGCCGCCGACTGGTTCTTCCCCCTCCCCGGGCAGCTACTGATCAACCAGGTTAGTGTTTTCTCCGTGTTACCAACTCAACGTAACCAATATATTACCGAGTAGTGTTTGGATTAGTTAGTGCGATTTGTTATTGGGAGTGGAGACAGGGCTAGGAAGATTAGGGTGTATTTGATTGTTAAAGTAGTGATATAATTAAATTTACCATTAGCTATTTTCGCGTTATAAGTGAGGGAGTGTTGCAGGATTGATCTATAATTCGTCTCTTAAGTTTTTGGATTAACTGGTAATTTAATATTAGTATAATAATGAACACAAACACATAATATATCTTCTATGTATTTGCGTTCATTATTTGGGAGTGTTTTGTTGGAACTCTAGAGAATGCTTTTAACCCATAATAATAATAATAATAAAAATAATAATAAAAAAAAAAGCTAAAAGTAGTTTGTTAATCTCTGAAACGGATTAGAATGCACTCAAATTTGTTTTGGGAGAAACATTTTTCTTTTAGAAACATTTCAAATTCACCATTAGTTTGATAGGTCAGGTTTCATAGAAAAAACTATGTTAATATGAACTAATGATGCAATTTGTTTCTTTCACATTCCTCGTCATTTATCTATAGTTAAAGTGTTCTTATTCGAGGCATTTTTGTGAGTGATTTTGAAATAGTTAAAAACACTTTAATCACTTCAAAAAATGTTTTTAATCATTTAAAATCATTTTGGTTCCATAAATACCATGTTTAAAAGCATAGGGAGATCAATTTTGAAGAATTAAAAACATATTTGGATTGATTTTGAACATATAAAAAAAAAAAAAAGTGATTTTAACAATTTTAAAATCACTCTCAAACATGCTCTATAAGACTTTGTTTTCTGGTTTTAATATTTTGAGAGTACTTTTCCTCCAAGTAAAAGTATGTTTTTGAATGATAAACATTTTAACAAATAATTGTAGAATTGAACAATCACTGAAACAAAAGTAATTAAAATAACTAAGACTTAAACGTTTTGAATGATTAATAATTTAACAAATATTTGTAGAATTGAAAAAATCACTCAATCTAGTAGTATGGCCTACATTTAAGATTTATCGAAAATTAATGGACTAAAATTGAACATTTGAAAACATGTAGACTAAATTGAACAAGTCCCAAAGTGCATAGACCAAAATAATATTTTAACCTAAAAAATATTTAAATTAGCCAATAAGTATTTCATGATTTTCATCCTCTTTAAAAGTTCAGTCCATGAACTTTCAATAATTTTTAGAATACATGTGTTTACACGACACAAAATTTTAAGTTTATGGCTTCATTATGCTTAAAATTCAAATTTAAATCTAACGGTCAATTAAAAGTTTTGAATATGTCAAAGATCTATTAAACACAACATTGAAAGTAGATAGACCTTTTAAACACAAAATTGAAAGTTTAAAAGATCTATTAGACACTTTTGAAAGTTAAGGGCTTGTCTGGCTAACATTTTTTTTCTCACTCTTTTTTTGTTATTCTTTTTTAATTAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGACCGTGTCATGTAACTTTTCTTTATTTATCTATTTTTACTGAAAAAGAAAATAGAAACATGTGTGATAACCCTTTCTTGTTTCTTATTCTCTACGATTGTAAGTTCTATATGAGAAATAGTTTTTAAGATTAAAAATCCAAAATTTTTATGTTATATATTTTTTTAGATATTTATTATGCATTTTTAAAGATAATTAATGATAAAAAAAAAATTCATTTATATTTTCAGAAAAAAAGAAAAAACTGGAAACAGTAGGAAGAAACAAAAAAAATTGATTTTGTGGTTTCTAAAAATTCTACACACTTTTGGAAATGTTATGAAAAATCACAACAAGAAACAAAAATAGTTCCAGAACACTAGAACCAAAAAAACAGTACACGAGAAACAGGAATGACTGATCCTGCGAAATAGGTATTTACCAGATACATATGATTCTGTAATTTGTATGAAAGTTTTGGTATGGAAATTAGAAGATAATATTGAGAACTTCATGGCTTTCACACCATCTTGCTTGCCTCTAGAGAAGCTTGAGAATGTAAAATATCATTAATCCTTGATTCCAAGAAGAAAATGCAATGAGCTGAGTCCAACTCTCTTTCAGGTCAGGTTGAGGGAGATGAGGTTGTTGATAGTAATGTCCTTCAATATTGTAGCATAGACAAGAAGGAGAAAAAGTCCATTGGAGAACTTGAGCAAGAATTTCTCCAAGCTTTACAGGTACATTGAATAAAAAATTTTAACATTGAATTCTGAATCTCTTTATCAATATTTTCTTCTAATTTATGCAAGATTTAATATTTTTCAGGTTAATTATCTCTATAATTTGGAGAAAGTTAAAATTTAGTCTTATGATTTAAAAGTTAAAATTTAGTCCCTATAATTTGATAAAATCCTCATAAATGGTCAGGACTATTTATGAAGTTTTATCAAACCACAAGGATGAAATTCTCGCTTTTAAAACCATATGAATTGAATTCTAACCATTTCTAAACCGTAGGGACCAAATTTGTAATTTAACATCGAGCTTGAAGTTTGGTATCATAATCAATCCAGTTTGAACTCAGTAAAACTTATAATGTTTTATGTGTCGTTAGATAACTTAGATTGTATGCACTCTCGAGTCAAAACTTTCATATTTGGATTTTTTTGGAAAAAAATTGAAAGCAACTTGCTTGGTAAGAAATCACTTGTAGAGTACTTTTGGCTCCAATGATTGATGAGAAGCACTTCTAAAGTACTTTAAAAGCAGAGAGTTAAGTATCAAAATAATTACAAAAACAATACTTAACGATTAAAAGTACTTTTGAAAAAAAGTACTTATTCTTGAAGCAACCGAATGCACCCTAAAATAGTTTCTCTTCACTTGGTGCAGGCATTCTATTATGAGGGTAAAGCAATTATGTCGAATGAGGAATTTGATAATCTCAAGGAAGAACTAATGTGGGAAGGCAGCAGTGTTGTAATGCTAAGTACTTACTGATCAAACATTCAAATCTCTCCATTTATACCTATTTCGATTGAAGATCGATCAGATACTTACAATTTGTGATACAGGTTCTGATGAACAAAAATTTTTGGAAGCTTCAATGGCATATGTATCTGGAACTCCAATTATGACAGATAAAGAATTTGACGAATTGAAGCTGAGACTTAAGGTATATTTAATGAGTTACAGTTTTAAACTCTGCTGGGCCGATTGAATAGCATCTTTATCTTGATTTATGTCTACATGGTTTTAAAGTTTTAATTTATTTTATTTTCCTAATTACATGACTATGTGACGGGAAGTAATTTGAAGAGGCTGCCACAATGTTGAGAAATGACAAATGTATTTGAAAATTATGAGGGGCATGCATATTTTTTAATCCACATCCAACTTAATAATTTTTCCTACATAACCCCTTCCTTTGGTTGATGATTTCTTATGAGTGGACCAAACTCTTGTTTTTTTGGGCTGGGATTAATATAGTTGCTTGGGGACTAATATAACTATACATATAAACAAATAATGCCTTATGGGATCTTAGCCATGTAACCCTGTTTCTCCTACTCCTACTGTTCTCTTCAAGCACATTTCACTTTACAATCAACAGGCCTCAGAAGGCTCAAGAATTTGTTTGGACCATGACCCTCATTACTGGATACATATGAGAAGTTCTAAAGGAGGTACCCCATTGTGCATTTTGTCCCAACCTTAGATGGAAGATGCTTTTATGGATATACAGTGGAGAAAAGGGTGTTCTACTCATTTTCAGGAATTTTGGTAGTTTAAGAATAGATGCAGATGTTGGATAGCTCAAGCTAAAGATGCCACTTTTTTCTACCTCATTCTTTTTACTTGTTATTTTGTCTCAAAAAGATGACAAAAGAACAATTAGGCTTAAGTTGTGAGTCCTCAAGTGCAAGCAATATCAATAACCCACCCATATCTGGGGTTTATTAAATATCTATCTAATCTTATTCCGTGGTTTAGAGTAGAAAATGACGCGAAGATAATAGTGGTTTACATAAGATTGAGACCTAACTTGGAACTGTAAAGATCCATAATCATGAACCATCTACTCTTAGCTTGGTGGTTTGAGATTCATTACGCAATTATATTGTTACCGTTCCTTCCCCGAATATAGGTGCCTCATCTCTAATGTCCATCCTTTCGTGAACTTGCGTACCAAGGCCAAAGTGAGAATACAAGCTACTTATTTTATGCATGTCTTATACATAGGATTCTATCTTACAATTATAGTCCCAAGCATGTCATTCAACATATCCACATAAACGTGAACCATTGCTACACCTTGCATCTCTATTATTGTATGTTAATTTACCAAGGGGGACCTAAGCCTCAAGAAAAGGCACTTGCATTGAATGAATTCATGGGTGAAATTCAAAGAATTCTGCAGCTCTTTATAACTAGCCTGTGGTCAAAGTCTGTATAATGTGTATGGTTAAAACTGTACAGATTTGACATAGGCAAATGATCTTCCTCCAATACGAGGGTGAGCTCTGTCACAGTGAAAAAGTATATGAAGACTCGCTGAATGTTTTGGAGTTTAAGTTTCGAGTCATGAAAGGACGAATAATGTAGAGCATGTTTGCAATGACTTTTCTAGTACTTAAAAATGTTAAAGTTATTCCAAACAAGCTCATGATCCCCTCCCCCGAAATTGTGTTATTAAGCCACATACAACTTAGTAGAGAGAATTTTTTTCCACTGAAAAAAAAAAAAAAAACAAGAATATTATTTCTAAATTGAACAAGCAGAACAATGCTTTTTGCAGCATTTCCTACTATCCTACTACTAAAGCATATAGCAGAGAACAAATAAAATGAAGTTACTACATGCAAGTCTGATGGGTATTCAATATCTCTAATGTCATAAACTTGAAATTATTGTACTTTCAGATGGAAGGAAGTGAAATTGTGGTCGAGGGTCCCCGTTGCAGTCTCCGGAGTAGAAAGGTATGTATAATTGAGTATATGATTTCAATCCATTTTATAATTGGGCGGGTTTAGGATGGTGAAAAATGTTTGTTTAGCCAATTATATCTTTTCAAATTGTTCATGTGTATAGATACTTAGTCAAAAATAATNTGCAGCATTGTATAATTCTAAACTTTCATGGGACATAATAACTTCTTACTTTATGCTCCTATAACTTGGAATTTGTTCACACTGAGTTGTATGCAGCTTCCGGAGCCATTCAGTTTCATCTTCACTTGGTTTGCTGCTGTGCCATTTCTAGTTTGGTTAGCTCTTACCCTTACAAATGCAGTTGTTAGAGACTCTTTGATCTTGAAGGTAGAGTTCTTTGTCACCAATTTTTGCCAATTTACACCTTGAAATGGCATATGGAGCAATCTTGACTGAAGAAGGAATCTTGTTTAGGGACCTTGTCCAAACTGTGGAACTGAGAATATCTCTTTCTTCGGCACCATACTGTCCGTTTCAAGCGGTGGCAACATAAACAACATCAAGTGCTCAAAGTAAGTATGAAGCTCATAAATTTGCAACTATTAGTATCAACATTACCTACAAGCTTCTTTTTTCAATTACCGGATCAGTTAATCTTATAACTTCTCAATGTAAAAACTATATACTTTCCTCAGCTGTGCAACTGAGCTGGTTTACAACTCAAAAACCCGCCTGATCACATTACCAGAAGGAAGCAACGCCTAAGTGAGAGGTACACTTTGTGATCATCTTCAATCTCCTGAGGGAATTGTCTTTTAACATGCATCTACTAAACATTAAGTTCTATGTAACCAAATATAACCCCAGTTACCACCTCGGTTTGACATTTGAGAACTCGTGCCCTTTCTCTCAAACTCCATCTCATTCAAATCATAAAAGTTTTCTCATGCTACTTACTATCATATCTGTTGACAAAAATCCAGGATTTGTTAGCCGTAATTCCAGGAGAAACAAGACCAAGGGATATCATAAGGCAGCTACAAGAATTCTCCATGGTTAGATATGAATGATATTAAGATGTTTAAGCCCTGCCTTTAGAGAGAGGATTTTTCAGCTGTTGTACAACATTGTATCTTGATGTACAAATTTGTGAATATTCATCATGTATAAACGATACCTAGAGAAGGGTGTGATGAAGTTTCAGAATGCCA TCCCATTTTCCCATTGCCTTATCTTCCTTTCCTTCCAAACAGGGAGGGAAAATTCATCCACCTTCTTCCAATAATCCTAAACAATTTTCTGCTCCATTTTCCCTCTCCCATGGCGACCAAATTGACGCTCTCCTTACCGTCTTCGAGTTCGCTCACTGTTCCGATTCAAAATCAGAAACCGGCAGCTTCTCTGCTTTCGCCTTCTTCAAGGTCCCAATTGGTTAGGGCTTCTAGCCGGCGATTGTTCCTTCGCCGCCGACTGGTTCTTCCCCCTCCCCGGGCAGCTACTGATCAACCAGGTCAGGTTGAGGGAGATGAGGTTGTTGATAGTAATGTCCTTCAATATTGTAGCATAGACAAGAAGGAGAAAAAGTCCATTGGAGAACTTGAGCAAGAATTTCTCCAAGCTTTACAGGCATTCTATTATGAGGGTAAAGCAATTATGTCGAATGAGGAATTTGATAATCTCAAGGAAGAACTAATGTGGGAAGGCAGCAGTGTTGTAATGCTAAGTTCTGATGAACAAAAATTTTTGGAAGCTTCAATGGCATATGTATCTGGAACTCCAATTATGACAGATAAAGAATTTGACGAATTGAAGCTGAGACTTAAGATGGAAGGAAGTGAAATTGTGGTCGAGGGTCCCCGTTGCAGTCTCCGGAGTAGAAAGCTTCCGGAGCCATTCAGTTTCATCTTCACTTGGTTTGCTGCTGTGCCATTTCTAGTTTGGTTAGCTCTTACCCTTACAAATGCAGTTGTTAGAGACTCTTTGATCTTGAAGGGACCTTGTCCAAACTGTGGAACTGAGAATATCTCTTTCTTCGGCACCATACTGTCCGTTTCAAGCGGTGGCAACATAAACAACATCAAGTGCTCAAACTGTGCAACTGAGCTGGTTTACAACTCAAAAACCCGCCTGATCACATTACCAGAAGGAAGCAACGCCTAAGTGAGAGGATTTGTTAGCCGTAATTCCAGGAGAAACAAGACCAAGGGATATCATAAGGCAGCTACAAGAATTCTCCATGGTTAGATATGAATGATATTAAGATGTTTAAGCCCTGCCTTTAGAGAGAGGATTTTTCAGCTGTTGTACAACATTGTATCTTGATGTACAAATTTGTGAATATTCATCATGTATAAACGATACCTAGAGAAGGGTGTGATGAAGTTTCAGAATGCCA ATGGCGACCAAATTGACGCTCTCCTTACCGTCTTCGAGTTCGCTCACTGTTCCGATTCAAAATCAGAAACCGGCAGCTTCTCTGCTTTCGCCTTCTTCAAGGTCCCAATTGGTTAGGGCTTCTAGCCGGCGATTGTTCCTTCGCCGCCGACTGGTTCTTCCCCCTCCCCGGGCAGCTACTGATCAACCAGGTCAGGTTGAGGGAGATGAGGTTGTTGATAGTAATGTCCTTCAATATTGTAGCATAGACAAGAAGGAGAAAAAGTCCATTGGAGAACTTGAGCAAGAATTTCTCCAAGCTTTACAGGCATTCTATTATGAGGGTAAAGCAATTATGTCGAATGAGGAATTTGATAATCTCAAGGAAGAACTAATGTGGGAAGGCAGCAGTGTTGTAATGCTAAGTTCTGATGAACAAAAATTTTTGGAAGCTTCAATGGCATATGTATCTGGAACTCCAATTATGACAGATAAAGAATTTGACGAATTGAAGCTGAGACTTAAGATGGAAGGAAGTGAAATTGTGGTCGAGGGTCCCCGTTGCAGTCTCCGGAGTAGAAAGCTTCCGGAGCCATTCAGTTTCATCTTCACTTGGTTTGCTGCTGTGCCATTTCTAGTTTGGTTAGCTCTTACCCTTACAAATGCAGTTGTTAGAGACTCTTTGATCTTGAAGGGACCTTGTCCAAACTGTGGAACTGAGAATATCTCTTTCTTCGGCACCATACTGTCCGTTTCAAGCGGTGGCAACATAAACAACATCAAGTGCTCAAACTGTGCAACTGAGCTGGTTTACAACTCAAAAACCCGCCTGATCACATTACCAGAAGGAAGCAACGCCTAA MATKLTLSLPSSSSLTVPIQNQKPAASLLSPSSRSQLVRASSRRLFLRRRLVLPPPRAATDQPGQVEGDEVVDSNVLQYCSIDKKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGTPIMTDKEFDELKLRLKMEGSEIVVEGPRCSLRSRKLPEPFSFIFTWFAAVPFLVWLALTLTNAVVRDSLILKGPCPNCGTENISFFGTILSVSSGGNINNIKCSNCATELVYNSKTRLITLPEGSNA
BLAST of ClCG00G000150 vs. Swiss-Prot
Match: PGL1A_ARATH (PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59 Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 1
HSP 2 Score: 168.7 bits (426), Expect = 9.0e-41 Identity = 92/195 (47.18%), Postives = 119/195 (61.03%), Query Frame = 1
BLAST of ClCG00G000150 vs. Swiss-Prot
Match: PGL1B_ARATH (PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 7.4e-59 Identity = 118/177 (66.67%), Postives = 144/177 (81.36%), Query Frame = 1
HSP 2 Score: 169.1 bits (427), Expect = 6.9e-41 Identity = 93/195 (47.69%), Postives = 118/195 (60.51%), Query Frame = 1
BLAST of ClCG00G000150 vs. TrEMBL
Match: A0A0L9TR49_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g221500 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.2e-102 Identity = 202/293 (68.94%), Postives = 227/293 (77.47%), Query Frame = 1
BLAST of ClCG00G000150 vs. TrEMBL
Match: A0A151SNV3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_002704 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 6.0e-100 Identity = 207/318 (65.09%), Postives = 234/318 (73.58%), Query Frame = 1
BLAST of ClCG00G000150 vs. TrEMBL
Match: M1AXK4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012494 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 6.8e-96 Identity = 181/279 (64.87%), Postives = 218/279 (78.14%), Query Frame = 1
BLAST of ClCG00G000150 vs. TrEMBL
Match: A0A0D2Q123_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G242200 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 3.0e-91 Identity = 189/304 (62.17%), Postives = 220/304 (72.37%), Query Frame = 1
BLAST of ClCG00G000150 vs. TrEMBL
Match: B9RBZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1682480 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.6e-89 Identity = 197/323 (60.99%), Postives = 221/323 (68.42%), Query Frame = 1
BLAST of ClCG00G000150 vs. TAIR10
Match: AT4G22890.1 (AT4G22890.1 PGR5-LIKE A) HSP 1 Score: 230.7 bits (587), Expect = 1.1e-60 Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 1
HSP 2 Score: 168.7 bits (426), Expect = 5.1e-42 Identity = 92/195 (47.18%), Postives = 119/195 (61.03%), Query Frame = 1
BLAST of ClCG00G000150 vs. TAIR10
Match: AT4G11960.1 (AT4G11960.1 PGR5-like B) HSP 1 Score: 228.8 bits (582), Expect = 4.1e-60 Identity = 118/177 (66.67%), Postives = 144/177 (81.36%), Query Frame = 1
HSP 2 Score: 169.1 bits (427), Expect = 3.9e-42 Identity = 93/195 (47.69%), Postives = 118/195 (60.51%), Query Frame = 1
BLAST of ClCG00G000150 vs. NCBI nr
Match: gi|920688676|gb|KOM32659.1| (hypothetical protein LR48_Vigan01g221500 [Vigna angularis]) HSP 1 Score: 380.2 bits (975), Expect = 3.2e-102 Identity = 202/293 (68.94%), Postives = 227/293 (77.47%), Query Frame = 1
BLAST of ClCG00G000150 vs. NCBI nr
Match: gi|1012345271|gb|KYP56463.1| (hypothetical protein KK1_002704 [Cajanus cajan]) HSP 1 Score: 372.1 bits (954), Expect = 8.6e-100 Identity = 207/318 (65.09%), Postives = 234/318 (73.58%), Query Frame = 1
BLAST of ClCG00G000150 vs. NCBI nr
Match: gi|645266735|ref|XP_008238748.1| (PREDICTED: PGR5-like protein 1A, chloroplastic [Prunus mume]) HSP 1 Score: 345.1 bits (884), Expect = 1.1e-91 Identity = 189/322 (58.70%), Postives = 224/322 (69.57%), Query Frame = 1
BLAST of ClCG00G000150 vs. NCBI nr
Match: gi|823213713|ref|XP_012439597.1| (PREDICTED: PGR5-like protein 1A, chloroplastic isoform X2 [Gossypium raimondii]) HSP 1 Score: 343.2 bits (879), Expect = 4.3e-91 Identity = 189/304 (62.17%), Postives = 220/304 (72.37%), Query Frame = 1
BLAST of ClCG00G000150 vs. NCBI nr
Match: gi|763784946|gb|KJB52017.1| (hypothetical protein B456_008G242200 [Gossypium raimondii]) HSP 1 Score: 343.2 bits (879), Expect = 4.3e-91 Identity = 189/304 (62.17%), Postives = 220/304 (72.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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