Csa7G429630.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G429630.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Oxidoreductase/ transition metal ion binding protein
Location	Chr7 : 16723991 .. 16724685 (-)
Sequence length	360

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCACCAAAAAAACAAAACAAAGTCCTAAACCAAACGCATACACACACACCATTTTTCTTCCTAAATCGCCTCTCATTAGCAACCTCTCTAAACCGCCGTCGTCCTCGTTCCAATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCGGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTCTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGATGATCCGAACGAGACAACCCATACGTTCAACGATGGAATAATAGGAATTTTTACTCCTAGCTAAAATTTTCTACTACTTTATAGTACTGATCAATTGAAAGTATTATTGTAAGTGTCTTTGATATGCACTCTTTGGATTTGTTTTTATGTTGACGAAGAGTTTGGATGTGTCATAAGATATCTGTTTATATTAATTTTTAATGTAAAGATTACTATTAGT

mRNA sequence

ATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCGGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTCTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGA

Coding sequence (CDS)

ATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCGGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTCTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGA

Protein sequence

MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR*

Homology

[Close]

BLAST of Csa7G429630.1 vs. TrEMBL
Match: A0A0A0K9W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429630 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 9.6e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 60
           MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH
Sbjct: 1   MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 60

Query: 61  WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
           WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR
Sbjct: 61  WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 119

[Close]

BLAST of Csa7G429630.1 vs. TrEMBL
Match: M5X5I1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021264mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.6e-47
Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 1


Query: 5   HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSN 64
           H  PTFPLHLCFF L+LL F+ FSWY NYES +E +FDQ+KL+L+VSPLLLLL+VHWLSN
Sbjct: 16  HHHPTFPLHLCFFLLVLLTFVGFSWYINYESVLESMFDQVKLVLMVSPLLLLLVVHWLSN 75

Query: 65  TKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
                + SLIPLPEKDSLHRAGGTPWGVGFLLV L FM+SYQSYFQERWFPLLSR
Sbjct: 76  DDRRRVHSLIPLPEKDSLHRAGGTPWGVGFLLVFLFFMISYQSYFQERWFPLLSR 130

[Close]

BLAST of Csa7G429630.1 vs. TrEMBL
Match: A2Q3C9_MEDTR (Oxidoreductase/transition metal ion-binding protein OS=Medicago truncatula GN=MTR_2g062220 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-41
Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 1


Query: 1   MANT-HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLV 60
           MA T +SQP  PLHLCFF L LL+FL FSWYSNYE  +E + DQ+K++L++SPLLLLL+V
Sbjct: 1   MATTQNSQPALPLHLCFFLLTLLIFLGFSWYSNYEPIMESIMDQVKMVLMISPLLLLLVV 60

Query: 61  HWLSNT-KSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLS 120
           H+LSN    G   SLIPLPE++SLHRAGGTPWGVG  LV+LLFMVSYQS FQERWFPLLS
Sbjct: 61  HFLSNYGDGGFFSSLIPLPERESLHRAGGTPWGVGLFLVVLLFMVSYQSSFQERWFPLLS 120

[Close]

BLAST of Csa7G429630.1 vs. TrEMBL
Match: I3SZV7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-41
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 5   HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSN 64
           +S+P FPLHLCFF L L  FL FSWYSNYE  +E + DQ+KL+L+VSPL+LLL+VH++ N
Sbjct: 4   NSEPAFPLHLCFFLLTLFTFLGFSWYSNYEPIMESIMDQMKLVLMVSPLVLLLVVHFVCN 63

Query: 65  TKSGH-LPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
              G  L SLIPLPEKDSLHRAGGTPWGVG  LVLLLFMVSYQS FQERWFPLLSR
Sbjct: 64  YGDGGVLSSLIPLPEKDSLHRAGGTPWGVGLFLVLLLFMVSYQSSFQERWFPLLSR 119

[Close]

BLAST of Csa7G429630.1 vs. TrEMBL
Match: F6HPS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00100 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-41
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 1


Query: 2   ANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHW 61
           ++  S    PLHLC F  IL MF++FSWY NYE  ++ +FDQLKL+L+VSPLLLLL VHW
Sbjct: 7   SSAQSDQPLPLHLCCFLAILFMFIAFSWYINYEPVLDSMFDQLKLILMVSPLLLLLAVHW 66

Query: 62  LSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
           LS+      PSLIPLP++DSLHRAGGTPWGVGFLLV   FM+SYQSYF ERWFPLLSR
Sbjct: 67  LSSDLGRQFPSLIPLPQRDSLHRAGGTPWGVGFLLVFFFFMISYQSYFHERWFPLLSR 124

[Close]

BLAST of Csa7G429630.1 vs. TAIR10
Match: AT2G31940.1 (AT2G31940.1 unknown protein)

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-34
Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 1


Query: 8   PTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSNTKS 67
           P  PLHLC F LILLMF++ SWY++YE  +E    Q KL L+ SPLLLLL VH+LS+ + 
Sbjct: 9   PPVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQG 68

Query: 68  --GHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPL 117
             G + SLI L E++SL+RAGGTPWGV F+LV L FMVSYQS FQERWFPL
Sbjct: 69  VGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119

[Close]

BLAST of Csa7G429630.1 vs. TAIR10
Match: AT5G19875.1 (AT5G19875.1 unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 6.0e-32
Identity = 62/103 (60.19%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 13  HLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSNTKSGHLPS 72
           HLCF F+++   LSF+WY N+ES +ED  D LKL+ I +PL LLLLVH+ S    G L  
Sbjct: 21  HLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLFLLLLVHFFS----GGLSF 80

Query: 73  LIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFP 116
            +P PE+DS+HRAG +PWGV  +LVL+LFMVSYQS FQERWFP
Sbjct: 81  YVPWPEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 119

[Close]

BLAST of Csa7G429630.1 vs. TAIR10
Match: AT2G21180.1 (AT2G21180.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 37/118 (31.36%), Postives = 57/118 (48.31%), Query Frame = 1


Query: 3   NTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWL 62
           ++ S    P  +     +  +FL  SWY + E A E   +Q+   L++ PL L++LV WL
Sbjct: 12  DSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLIVLVRWL 71

Query: 63  SNTKS-GHLPSLIPLPEKDSL------HRAGGTPWGVGFLLVLLLFMVSYQSYFQERW 114
           S+ ++   L  +     + +          G +PWGV  L+VLLL ++ YQS F E W
Sbjct: 72  SSMENPDALLGMFSSSRRTTYVSPGAGGDGGSSPWGVAALIVLLLVLLQYQSSFLEMW 129

[Close]

BLAST of Csa7G429630.1 vs. TAIR10
Match: AT5G42146.1 (AT5G42146.1 unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09
Identity = 41/116 (35.34%), Postives = 54/116 (46.55%), Query Frame = 1


Query: 4   THSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLS 63
           T S P  PL L     I+ + L  S Y  Y+  VE     LKL ++  P+L + ++  LS
Sbjct: 24  TSSAP--PLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLS 83

Query: 64  NTKSGHLPSL--IPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLL 118
                   S   +   +  SL   G  PWGV  +L+LLL +VS QSYF   W+P L
Sbjct: 84  FVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYPNL 137

[Close]

BLAST of Csa7G429630.1 vs. TAIR10
Match: AT3G06890.1 (AT3G06890.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-07
Identity = 24/71 (33.80%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 36  AVEDVFDQLKLLLIVSPLLLLLLVHWLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFL 95
           A+ ++   + LLL+  P++LLL + +LS+ +   + ++    E +S+HR  G+P GV   
Sbjct: 48  AIAELLSPVGLLLL--PIILLLTIQFLSSERGSFVSAIFSTGEPESIHRVSGSPVGVALF 107

Query: 96  LVLLLFMVSYQ 107
           LVL+LF++ Y+
Sbjct: 108 LVLILFLLYYR 116

[Close]

BLAST of Csa7G429630.1 vs. NCBI nr
Match: gi|778728781|ref|XP_011659474.1| (PREDICTED: uncharacterized protein LOC101219783 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 60
           MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH
Sbjct: 1   MANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 60

Query: 61  WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
           WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR
Sbjct: 61  WLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 119

[Close]

BLAST of Csa7G429630.1 vs. NCBI nr
Match: gi|659122603|ref|XP_008461231.1| (PREDICTED: uncharacterized protein LOC103499879 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 3.7e-60
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1


Query: 1   MANT-HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLV 60
           MANT HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLV
Sbjct: 1   MANTGHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLV 60

Query: 61  HWLSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
           HWLSNTK+GHLPSLIPLPEK+SLHRAGGTPWGVGFLLVLLLFM+SYQSYFQERWFPLLSR
Sbjct: 61  HWLSNTKNGHLPSLIPLPEKNSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 120

[Close]

BLAST of Csa7G429630.1 vs. NCBI nr
Match: gi|596042068|ref|XP_007220118.1| (hypothetical protein PRUPE_ppa021264mg [Prunus persica])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 1


Query: 5   HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHWLSN 64
           H  PTFPLHLCFF L+LL F+ FSWY NYES +E +FDQ+KL+L+VSPLLLLL+VHWLSN
Sbjct: 16  HHHPTFPLHLCFFLLVLLTFVGFSWYINYESVLESMFDQVKLVLMVSPLLLLLVVHWLSN 75

Query: 65  TKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
                + SLIPLPEKDSLHRAGGTPWGVGFLLV L FM+SYQSYFQERWFPLLSR
Sbjct: 76  DDRRRVHSLIPLPEKDSLHRAGGTPWGVGFLLVFLFFMISYQSYFQERWFPLLSR 130

[Close]

BLAST of Csa7G429630.1 vs. NCBI nr
Match: gi|297741206|emb|CBI32157.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 176.0 bits (445), Expect = 3.9e-41
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 1


Query: 2   ANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHW 61
           ++  S    PLHLC F  IL MF++FSWY NYE  ++ +FDQLKL+L+VSPLLLLL VHW
Sbjct: 53  SSAQSDQPLPLHLCCFLAILFMFIAFSWYINYEPVLDSMFDQLKLILMVSPLLLLLAVHW 112

Query: 62  LSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 120
           LS+      PSLIPLP++DSLHRAGGTPWGVGFLLV   FM+SYQSYF ERWFPLLSR
Sbjct: 113 LSSDLGRQFPSLIPLPQRDSLHRAGGTPWGVGFLLVFFFFMISYQSYFHERWFPLLSR 170

[Close]

BLAST of Csa7G429630.1 vs. NCBI nr
Match: gi|357451093|ref|XP_003595823.1| (oxidoreductase/transition metal ion-binding protein [Medicago truncatula])

HSP 1 Score: 176.0 bits (445), Expect = 3.9e-41
Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 1


Query: 1   MANT-HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLV 60
           MA T +SQP  PLHLCFF L LL+FL FSWYSNYE  +E + DQ+K++L++SPLLLLL+V
Sbjct: 1   MATTQNSQPALPLHLCFFLLTLLIFLGFSWYSNYEPIMESIMDQVKMVLMISPLLLLLVV 60

Query: 61  HWLSNT-KSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLS 120
           H+LSN    G   SLIPLPE++SLHRAGGTPWGVG  LV+LLFMVSYQS FQERWFPLLS
Sbjct: 61  HFLSNYGDGGFFSSLIPLPERESLHRAGGTPWGVGLFLVVLLFMVSYQSSFQERWFPLLS 120

The following BLAST results are available for this feature:

BLAST of Csa7G429630.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9W6_CUCSA	9.6e-63	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429630 PE=4 SV=1	[more]
M5X5I1_PRUPE	9.6e-47	77.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021264mg PE=4 SV=1	[more]
A2Q3C9_MEDTR	2.7e-41	71.07	Oxidoreductase/transition metal ion-binding protein OS=Medicago truncatula GN=MT...	[more]
I3SZV7_LOTJA	2.7e-41	73.28	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
F6HPS2_VITVI	2.7e-41	67.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00100 PE=4 SV=...	[more]

BLAST of Csa7G429630.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31940.1	2.9e-34	63.06	unknown protein	[more]
AT5G19875.1	6.0e-32	60.19	unknown protein	[more]
AT2G21180.1	4.4e-11	31.36	unknown protein	[more]
AT5G42146.1	1.4e-09	35.34	unknown protein	[more]
AT3G06890.1	5.1e-07	33.80	unknown protein	[more]

BLAST of Csa7G429630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728781\|ref\|XP_011659474.1\|	1.4e-62	100.00	PREDICTED: uncharacterized protein LOC101219783 [Cucumis sativus]	[more]
gi\|659122603\|ref\|XP_008461231.1\|	3.7e-60	96.67	PREDICTED: uncharacterized protein LOC103499879 [Cucumis melo]	[more]
gi\|596042068\|ref\|XP_007220118.1\|	1.4e-46	77.39	hypothetical protein PRUPE_ppa021264mg [Prunus persica]	[more]
gi\|297741206\|emb\|CBI32157.3\|	3.9e-41	67.80	unnamed protein product [Vitis vinifera]	[more]
gi\|357451093\|ref\|XP_003595823.1\|	3.9e-41	71.07	oxidoreductase/transition metal ion-binding protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G429630	Csa7G429630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa7G429630.1	Csa7G429630.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G429630.1.utr3p1	Csa7G429630.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G429630.1.cds1	Csa7G429630.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G429630.1.utr5p1	Csa7G429630.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	FAMILY NOT NAMED	coord: 10..119 score: 4.7
None	No IPR available	PANTHER	PTHR33306:SF3	SUBFAMILY NOT NAMED	coord: 10..119 score: 4.7