Csa7G341220.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGACCTTGGTGAAAAGCCGCTGCAGAATATATCGGAGTCGTTCAAAGCCCTTGCAGCCAATATAAATTCTGGAAACACCACGGTCGAGGTTGCACCGTTTTCTCGAGCCTGCTCCTTCATTTCACCTCTTTTTGGTTGCTTGGGCATAGCATTCAAGTTTGCAGAAATGGACTATGTTGCTAAGGTATTTTTATCAGTTTCTATCTTAATTATCGATGTTGTAGCTGCTGTTTGGTCTTTAGGAACTATGGGAGATGAATTGGTGTAAAATTGGTTCTAGAATTTTTAGGTCTGTTGGAGATCGAGTGACATTTGGAACTGGCCAAAATGTTTAGGTTGTGGCAACAAAATATCTGTTTTGCTATTGTTGGATATTGTTTTGAGGAACTTTTCCATTCTTACGTTGTTTGGTGAAACCTATAAACAGGATAATGAAGTGGAGGCCTAGTTTTATGTTTCAAATTATATACTACATGCAAAGAAGATTACTTGACACTAAGCTATGTGATAATGGACTAATGAATGTACACAATTTCTTAAGCTTGAATTTGTGTTTGTTGAGGCAATTGCTGATGAATTGGAATCTTCTGCTCGTCAGTTCACAAAAATTCATTAAAAGTTGCAACATTGGAATCTTCTGCTTTACATACCCAAGTAACACTTGATGAATCAAATTTATTTACAAAGGGCTTGTATGTTATTAATTAAGATTGGTTCTTCTTTCTGCATTCTTTTTCAATATTTTAAACAATGAAGTGGCTTTGAAATAATGAGATTTACATTGTGTCAGATACTTAGATAGTGAACATTTGTTTATAGTCGCAATGTTATGCCTGATAAATAGACCCTTACAAGTTAACTTATACATGTACAAAGATCTTGTTTGAATCTTTATGAGTCATGTTGGTAGAATCTGACGTGTATCAGTTATGTCACGGCTAATGCTACGAAATGTTCATCTTCTTATTCCTTTTTTCTTTTACTCTCTTATCTCTGTGGTTTTGCACCTACAAATGATTAACAAATTCAATTGTCATTTTGATTGCATAATATAGAAGAATGCATGGAAATTTGGAAACTTTCTGTGAAATCTACAAATTTCAAATGTATTGGCCTAGCATATGTTTTTTCTTTGTTCAATACAATATGTTTTTTAATTCTGCCGGGTACCTGGAAATTTGAAGTCTTTCTATGAAATCTACAAAATTTTGTGTTTTACTAGCATATTGAAGCGTGATTGAACGCATTTTCTTAGAAAAAAAGACATTTCACTCTTGAATTCTACTTTTATTCTTTTAGTGTAAGTAGCTTGGAACACATAAGGTTGGTATGCACATCACATTATTCCGGTTGTTTAAATATCTCATGCAATTTACTCTTCTCATAAAATAGAAGGGAAAAGTAAAAGAAGAAAAAATTTGCATGTTGTTTACCATTTTGTTGTGTCATGTTTGAGGTTTGATTGCTTATGGACTAAACTATCAATAGGTTAATGATCTCGTAGAATCATCCAAGTCAATTGTATCTCTACAAGCGTTGCTGGACAAAGATATTGAATCTGACTGTGTGAGGAAAGCTGGTAGCCACTCGAGAAATCTCTTGAGAGTGAAACGTGGGCTTGACATGGTCAGAGTACTCTTCGAGCAAATTCTACTTACAGAGTATGTATATCAAACATTTTCAATATCATAATGAACACATGTTTTAGGTGAATTTTAGCTTGAAGTAAGCAAGGGAAGGCACGTTGATCAATTTCTTTCACATTGTTACAAGGGAATCATCCACTAGTTTTTGGATTGCCTTTTTCATTATATTGTAGTTAGTCTAATTGGACGAACTCTTTGTTTCTGTGTCTTCCTCTACGCTCTAGCAACAACTATTAAATCTTTCTTGCTCTAGATTGGTCTCAAAGAAATATAGCTTGAATCAATATAATTTGTTTCCCATTTGAAGCTATAGTAAAGCTATCATTCATAATCTTCCTTTTTTGTCTTTTTTACTATCTATGAATGTTTGAGTCAACTTATGTTGTGCACCTCAACTAATCTCACGGGACTACTTGCTTAACCTTACAACATTTGGATATCAATGAACGATGTAATAAGGGCATTCCTCGAGACATTCCTGGGATGGAAGTTGTAATACAAACTCTAGACACTCCCGGGTGACTACTTAGCTATTTAGTTTAAAACTGCTTGTACACATTTTCACCTATAAATAAACACCTCCTACTCTCATATTGAGGGAGAAGATATTCATTCATTCAAAAAATAGTGTTTGGTATGACAACAATTGGTATCAGAGCACCATAAGCTCTCCGACCTATGGCTCTCCAGCGAAACCAACCGGCGACGGCACAACGATCTACTCAAAACCAAGAGGCGGAAGAAATCCCCGTCCTCTCTCCAAGAACCACATCGAGACGCTTGTTGTCCTTGGAGGCTTCGGTGGAAGGAATATAAATTGTTTGATAGTATGGGTTTCCATCTCAAAACCAATTGACCATGAGAGGAGTAGCCCATCTATCTTATATTGAGTGTGAGTCTCTTTGGATTTTTCAATGTGGGACTGTTAGCATCTTCAACATGCCCCCTCAAGATGATGTCTCCTTGGGTTCACCTATCTTGGACCGCATACCTGTTTGGGTTTAATGGGCTTTGATACCATATTGAAAGTAATAAACATGAAACCAAGGCTTACGTGAAAACCTAAGAACCGACAGAAGAACTTCCATGTTTTTAGTTTTATTATTTTCCTAATGAATGAATATAATAGGTACAAAGAGGGAGAATAGATAGAATACAATAAGGAGTAAAAAAGGAAAAGATTTAGAAAATAGGAAAAAATTTCCATATTCTTTTAAAAAAATACTCTAAGGACCAAGCCCACTAATATTAACACTCCCCCTCAAGTTGGGACGTAAATATCAATGAGGTCTAACTTTCTAACACAAAAGTCGAAGTTTGGTTTGAGAAGCCTCTTGGTGAGAACATCAACAACAACCTATTGGCTCGAAGGTATGTATAGAATGCATATGCTCCCACTATCAAGTCTTTCTTCTATGAAATGTTGATCAATCTCAACATGTTTAGTTCTATCATGTTGAACTCAGTTGTTAGCGATACTAATAGTGGCTTTATTATCATATAAAAGCTTCAATGGTGTCTCACATTCTTGATGAAGATTAGATAGAACTTTCTGGAGCCAAATTTCCTCACATTCCCAAACTCAGAGATCGAGATTGGTGGCAACGGGGCATCTGAGGGGCTGGAATACATAGAGTTAGGCGAAATCATCAAGAAAGAAGGTTTGAAGTGCAATAAAGGAGGAAACTAGTCCAAGATTACCAATAACCCCATCCAAGAATTCAAGAATACTACCAAATTCATCAAGAAAAGAGGTTTGAAGCTCAAGAATGTAGGAGACCTAATCAAAAGTATCAAGAAGTTTCCCCAAGATTTCAATTGCTTTCAAAATTTTGCAAGAACCACCTGTTAGTATAGACAAGAAAATGAATTTTACTTCCATCAATAATGCTAGAGTTCTAATTCAAGTAATTTAGAAGAATTTCAACCTTCAAATTTTGGTCATGCTCAATTTTCTCAAAGAACCCATCATTATCCAAACTGGAAATTTGATTCTAGTGATTCTAGTGACTCCGATGATGTTTCTAAGACAGTTTGGGACAGAATAAGAAGGCGACCTATTGGAACATTTCCGATCAATCCGAGAAGGCTCAATTTACCGCAGATTTTTTGCAATTAAGCAAAATTCAACGGTAGAAGAATATCAGAATCTCTTTGACAAATTAGTGGCACCATTATGGACTTACCTAATAGAGTTCTGGAAGAAACATTTATAAATGGATTAATTCCATGATATCACACTGATGTGCAGGAAATAGTACCATATATGTCTGAAAATCATGAATGGAAAGCAGTGCCAGAGGAAATATTTGGCTATAAGAAAAATGATGCAGGAGCATGGGAAGTTTTGATAAGCTTGAAAGGATTACCAAGACGTGAAGCGACTTGGGAGATTTATGATGATTTCCCGCAGTCATTTCCTGATTTTCACCTTGAGGACAAGGTGGATTTGGAAAGGGAATGTAATATTAAACCATCGATAGTTCTACAAGTAGAAAAGGGAAGAGGGGAGTAGTACGTGTAAAGGAGGGACCACGGTGAGGGAAGTGGGTTATAGAAGAATAAAAAAAGAGGGAAAGTTAGTTGAAGTTTTAAGTAGAAATTCTGTTTCATCTTTGAGAGAGAAGATAACAGAATAAGTAAAGGGTTTTCTGTATTTCTCGAATTGATACTTCTATCAATTCGATTATTCCTTTCTATCGTAATTCCATTTCATTATTGGAAATAAAAATGAATTGTTTCATTGAATCTATGTTGGAAATCGAGTTCCATCATCTTTCTTTCATTATTTGATTCCCTCAAGTGAGTCGATCATTTTGGTGCTTTGGAGGATTAAGGTCCTTAGAAAGGTTCATTCTTTACTTGGCAGGTTCTTCACGGTTGTGGTAACACATTTGACAAGCTTGTTAGGGAGTTGCCATTGCTTATTGGACTTTTTGTTATATTCTTTGTTAAAAGGAAGAAGAAGACCTAGACCATATTCTTTGGCGTTGTGTCTTCGTGAGTGGTGTCTGGGATTCTTTTTTCCAAACGTTTAGTATATGATGAGTATTCATCATAGAGATGTCAGTGCTATGATGAAAGATTTCCTCCTCAATCTGCTTTTTGGGAAGAAGGCTAGTTTCGTTGGCTTGTTGTGGTGTGTGTATGGTTTTATTGATTTGTGGGGTGAGCGGAACAATAGGGTGTTTAGGAGAGTGGAAAGGGATCCAGGGAGCTTTGGTCCCTTGTTCGTTTTCATGTTTTCATTTGGACTTTGATTTTAAAGACTTTGTAATCAATGTGTGATAGTTGGAGTCTTTTCTTGTAAATGGAGTCCCTTTTTTTGTGGGCTTAGTTTTTTGTATGTCCATGTATTCTTTCATTTTTGTTTCTCATAGATAGTTTGTTATTTTCTTCCAAGAGAGAAAAATCAAGGTCATCTTCTCCATCTTCCACTAGGCCAACTCATGATGGTTTCATCCTTCACAATCATATCCTATAGAAACATGATTAGTGATTACAACTCAAAATTTCGACATCTACCATTTTTATGATTTTTTTGGACTTGTTTGGGGAATGCAATGGCCTCTTTTCCGAGACGTTTTCCTCTTTTGACTGCTTTTTGCACCCTTTTATTAATTATAGTATATCCTTTTAAAACTCCAATTGGAGCCTTTTGTTTTAATCAATCACATGTTTGGGGTTTTCTCCTTGTTTCATTTACGAATGAAATGGTTCTTTTACGAATAAAAGAAAAAAGAAATCATCCTCTGATGTAATTTGGTTGCAAAAATGTTGAACAATAGTTCCTGATAATGGCAGAGGCAATTCCTTGAGAGATCCAGCTTCAAAAGCATATGCACAGGTATTTGCTCCTCACCATGGGTGGGCTATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTACAAAGGGACAATTACTAAGCAAGCTCAAAGAAGATGAAGCCTCAGCCAGAATCCTGATGCAAGATTATGTGGCTGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAATATATCAACTACAGATTATTATCTAAATACTTTGAGCTCTGTATATGTAATCTATTAATGTTTCTTGGCCCCTCACCCAGAAAGGAAAGAAGGAAAAATAAAAATGCAATCAACTAGAAATCTTTCTTTTGACTTTTATTGATGGATTTGTATCATGGAGCGTTGGCCTCCTTCCATTAAAGATTAAAAAACAATACATGGGAAAATAATGCCATGGTTCGTATTGTCACTTCGAAATATGAGTGGATAAAGAAATTTCTAATGTCATGAGTATTATTGCTGA ATGGGGGACCTTGGTGAAAAGCCGCTGCAGAATATATCGGAGTCGTTCAAAGCCCTTGCAGCCAATATAAATTCTGGAAACACCACGGTCGAGGTTGCACCGTTTTCTCGAGCCTGCTCCTTCATTTCACCTCTTTTTGGTTGCTTGGGCATAGCATTCAAGTTTGCAGAAATGGACTATGTTGCTAAGGTTAATGATCTCGTAGAATCATCCAAGTCAATTGTATCTCTACAAGCGTTGCTGGACAAAGATATTGAATCTGACTGTGTGAGGAAAGCTGGTAGCCACTCGAGAAATCTCTTGAGAGTGAAACGTGGGCTTGACATGGTCAGAGTACTCTTCGAGCAAATTCTACTTACAGAAGGCAATTCCTTGAGAGATCCAGCTTCAAAAGCATATGCACAGGTATTTGCTCCTCACCATGGGTGGGCTATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTACAAAGGGACAATTACTAAGCAAGCTCAAAGAAGATGAAGCCTCAGCCAGAATCCTGATGCAAGATTATGTGGCTGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAA ATGGGGGACCTTGGTGAAAAGCCGCTGCAGAATATATCGGAGTCGTTCAAAGCCCTTGCAGCCAATATAAATTCTGGAAACACCACGGTCGAGGTTGCACCGTTTTCTCGAGCCTGCTCCTTCATTTCACCTCTTTTTGGTTGCTTGGGCATAGCATTCAAGTTTGCAGAAATGGACTATGTTGCTAAGGTTAATGATCTCGTAGAATCATCCAAGTCAATTGTATCTCTACAAGCGTTGCTGGACAAAGATATTGAATCTGACTGTGTGAGGAAAGCTGGTAGCCACTCGAGAAATCTCTTGAGAGTGAAACGTGGGCTTGACATGGTCAGAGTACTCTTCGAGCAAATTCTACTTACAGAAGGCAATTCCTTGAGAGATCCAGCTTCAAAAGCATATGCACAGGTATTTGCTCCTCACCATGGGTGGGCTATCAGAAAAGCTGTTGGGGCAGGGATGTATGCTCTTCCTACAAAGGGACAATTACTAAGCAAGCTCAAAGAAGATGAAGCCTCAGCCAGAATCCTGATGCAAGATTATGTGGCTGCTTCTGCTCCTGTGATTCAGTATGTTGAAAAGCTCTTCTTCTCCAGAGATTTGGGCATAGATTGGTAA MGDLGEKPLQNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMDYVAKVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQILLTEGNSLRDPASKAYAQVFAPHHGWAIRKAVGAGMYALPTKGQLLSKLKEDEASARILMQDYVAASAPVIQYVEKLFFSRDLGIDW*
BLAST of Csa7G341220.1 vs. Swiss-Prot
Match: ACD11_ARATH (Accelerated cell death 11 OS=Arabidopsis thaliana GN=ACD11 PE=1 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 4.9e-76 Identity = 141/200 (70.50%), Postives = 166/200 (83.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. Swiss-Prot
Match: ACDH_ARATH (ACD11 homolog protein OS=Arabidopsis thaliana GN=At4g39670 PE=2 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 6.6e-49 Identity = 96/203 (47.29%), Postives = 136/203 (67.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TrEMBL
Match: A0A0A0K8C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G341220 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-108 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TrEMBL
Match: A0A067KIU8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09231 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 9.8e-84 Identity = 155/199 (77.89%), Postives = 179/199 (89.95%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TrEMBL
Match: A0A0B0PR21_GOSAR (Glycolipid transfer domain-containing protein 1 OS=Gossypium arboreum GN=F383_07155 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.2e-83 Identity = 156/199 (78.39%), Postives = 176/199 (88.44%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TrEMBL
Match: A0A067GJ00_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027852mg PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.2e-83 Identity = 155/203 (76.35%), Postives = 176/203 (86.70%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TrEMBL
Match: B9H9V3_POPTR (Accelerated cell death 11 family protein OS=Populus trichocarpa GN=POPTR_0006s05030g PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.9e-82 Identity = 160/205 (78.05%), Postives = 177/205 (86.34%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TAIR10
Match: AT2G34690.1 (AT2G34690.1 Glycolipid transfer protein (GLTP) family protein) HSP 1 Score: 285.4 bits (729), Expect = 2.7e-77 Identity = 141/200 (70.50%), Postives = 166/200 (83.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. TAIR10
Match: AT4G39670.1 (AT4G39670.1 Glycolipid transfer protein (GLTP) family protein) HSP 1 Score: 195.3 bits (495), Expect = 3.7e-50 Identity = 96/203 (47.29%), Postives = 136/203 (67.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. NCBI nr
Match: gi|449443730|ref|XP_004139630.1| (PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus]) HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-108 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa7G341220.1 vs. NCBI nr
Match: gi|659116335|ref|XP_008458024.1| (PREDICTED: ceramide-1-phosphate transfer protein [Cucumis melo]) HSP 1 Score: 380.2 bits (975), Expect = 2.3e-102 Identity = 193/204 (94.61%), Postives = 198/204 (97.06%), Query Frame = 1
BLAST of Csa7G341220.1 vs. NCBI nr
Match: gi|802620608|ref|XP_012075638.1| (PREDICTED: glycolipid transfer protein [Jatropha curcas]) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83 Identity = 155/199 (77.89%), Postives = 179/199 (89.95%), Query Frame = 1
BLAST of Csa7G341220.1 vs. NCBI nr
Match: gi|568827902|ref|XP_006468286.1| (PREDICTED: accelerated cell death 11 isoform X1 [Citrus sinensis]) HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83 Identity = 155/203 (76.35%), Postives = 176/203 (86.70%), Query Frame = 1
BLAST of Csa7G341220.1 vs. NCBI nr
Match: gi|728846393|gb|KHG25836.1| (Glycolipid transfer domain-containing protein 1 [Gossypium arboreum]) HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83 Identity = 156/199 (78.39%), Postives = 176/199 (88.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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