Csa7G339650.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGAACAACGGGAACAGAAAAGGGTGTGTTAAAGTTAATTCATCCAGGAAAACACGTTGAGACTTATACCAAACCAATACTTGCCTCTGAAGTCCTAAAAAAATATCCTAAGTTTTGCATCACAAGACCTGATGTCTTTAAATATCCATGGATTGTTGTGAGGTCTGATTCCCTTTTAGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGAACCCTCCATCGCCTCTTGAAGACCAACCATCCACCCGATGGCTCGTTGCCGTCGCTGTTGTCGTCCCCTCTATCTCGCTCTTTCTCGAGGCCATCCTTACCTTTGAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTCGAAGCCATTGGGGGAAGTCGACGGAATAAGGAATAGGAAAAACGCTCATGTTGAGTGGTGGTTGTCAATGTTGCCTCCACATGGTGTTGGCAATAAGAGATCAACCGTGAGGTATTCTTCTTCGCATGTGCATGACTGTTACAAATGTGGCAGTGTGCCTAGCACCGACATGTCGAGGGAGGATGTCGAAAATGATCGTGGCGGTGGTTATAGAAAATGGAAAACAACGACGTCGTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGGCTAATTTGAAAGTGAGATTTTCAATTCCTAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTTTCAAAACTTGCTGCCTCATTAATGGTTGATGTATGTAGATGA ATGGGAAGAACAACGGGAACAGAAAAGGGTGTGTTAAAGTTAATTCATCCAGGAAAACACGTTGAGACTTATACCAAACCAATACTTGCCTCTGAAGTCCTAAAAAAATATCCTAAGTTTTGCATCACAAGACCTGATGTCTTTAAATATCCATGGATTGTTGTGAGGTCTGATTCCCTTTTAGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGAACCCTCCATCGCCTCTTGAAGACCAACCATCCACCCGATGGCTCGTTGCCGTCGCTGTTGTCGTCCCCTCTATCTCGCTCTTTCTCGAGGCCATCCTTACCTTTGAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTCGAAGCCATTGGGGGAAGTCGACGGAATAAGGAATAGGAAAAACGCTCATGTTGAGTGGTGGTTGTCAATGTTGCCTCCACATGGTGTTGGCAATAAGAGATCAACCGTGAGGTATTCTTCTTCGCATGTGCATGACTGTTACAAATGTGGCAGTGTGCCTAGCACCGACATGTCGAGGGAGGATGTCGAAAATGATCGTGGCGGTGGTTATAGAAAATGGAAAACAACGACGTCGTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGGCTAATTTGAAAGTGAGATTTTCAATTCCTAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTTTCAAAACTTGCTGCCTCATTAATGGTTGATGTATGTAGATGA ATGGGAAGAACAACGGGAACAGAAAAGGGTGTGTTAAAGTTAATTCATCCAGGAAAACACGTTGAGACTTATACCAAACCAATACTTGCCTCTGAAGTCCTAAAAAAATATCCTAAGTTTTGCATCACAAGACCTGATGTCTTTAAATATCCATGGATTGTTGTGAGGTCTGATTCCCTTTTAGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGAACCCTCCATCGCCTCTTGAAGACCAACCATCCACCCGATGGCTCGTTGCCGTCGCTGTTGTCGTCCCCTCTATCTCGCTCTTTCTCGAGGCCATCCTTACCTTTGAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTCGAAGCCATTGGGGGAAGTCGACGGAATAAGGAATAGGAAAAACGCTCATGTTGAGTGGTGGTTGTCAATGTTGCCTCCACATGGTGTTGGCAATAAGAGATCAACCGTGAGGTATTCTTCTTCGCATGTGCATGACTGTTACAAATGTGGCAGTGTGCCTAGCACCGACATGTCGAGGGAGGATGTCGAAAATGATCGTGGCGGTGGTTATAGAAAATGGAAAACAACGACGTCGTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGGCTAATTTGAAAGTGAGATTTTCAATTCCTAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTTTCAAAACTTGCTGCCTCATTAATGGTTGATGTATGTAGATGA MGRTTGTEKGVLKLIHPGKHVETYTKPILASEVLKKYPKFCITRPDVFKYPWIVVRSDSLLVPGKVFLLVPKRTLHRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPLRSNAGTTPKHLTHLRRSQSKPLGEVDGIRNRKNAHVEWWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGSVPSTDMSREDVENDRGGGYRKWKTTTSLRSCMRKPGSAPRLANLKVRFSIPNEDIVEPVAKQRTVIESLSKLAASLMVDVCR*
BLAST of Csa7G339650.1 vs. TrEMBL
Match: A0A0A0K557_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G339650 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 1.1e-148 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Csa7G339650.1 vs. TrEMBL
Match: A0A067K296_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17548 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30 Identity = 93/260 (35.77%), Postives = 135/260 (51.92%), Query Frame = 1
BLAST of Csa7G339650.1 vs. TrEMBL
Match: V4VUD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023784mg PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 89/240 (37.08%), Postives = 126/240 (52.50%), Query Frame = 1
BLAST of Csa7G339650.1 vs. TrEMBL
Match: A0A0D2SKK3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G154400 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.3e-27 Identity = 92/262 (35.11%), Postives = 138/262 (52.67%), Query Frame = 1
BLAST of Csa7G339650.1 vs. TrEMBL
Match: A0A067FRV9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035813mg PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26 Identity = 88/258 (34.11%), Postives = 130/258 (50.39%), Query Frame = 1
BLAST of Csa7G339650.1 vs. NCBI nr
Match: gi|700189360|gb|KGN44593.1| (hypothetical protein Csa_7G339650 [Cucumis sativus]) HSP 1 Score: 533.9 bits (1374), Expect = 1.6e-148 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Csa7G339650.1 vs. NCBI nr
Match: gi|643713725|gb|KDP26390.1| (hypothetical protein JCGZ_17548 [Jatropha curcas]) HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30 Identity = 93/260 (35.77%), Postives = 135/260 (51.92%), Query Frame = 1
BLAST of Csa7G339650.1 vs. NCBI nr
Match: gi|567902232|ref|XP_006443604.1| (hypothetical protein CICLE_v10023784mg [Citrus clementina]) HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29 Identity = 89/240 (37.08%), Postives = 126/240 (52.50%), Query Frame = 1
BLAST of Csa7G339650.1 vs. NCBI nr
Match: gi|823180259|ref|XP_012487773.1| (PREDICTED: uncharacterized protein LOC105800970 [Gossypium raimondii]) HSP 1 Score: 129.4 bits (324), Expect = 9.1e-27 Identity = 92/262 (35.11%), Postives = 138/262 (52.67%), Query Frame = 1
BLAST of Csa7G339650.1 vs. NCBI nr
Match: gi|641847045|gb|KDO65926.1| (hypothetical protein CISIN_1g035813mg [Citrus sinensis]) HSP 1 Score: 127.9 bits (320), Expect = 2.6e-26 Identity = 88/258 (34.11%), Postives = 130/258 (50.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
|