Csa6G425720.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa6G425720.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNAC-domain protein; contains IPR003441 (No apical meristem (NAM) protein)
LocationChr6 : 19930645 .. 19931512 (+)
Sequence length594
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGTACGTAGACAGATCAATGTACTTATAGTAATAATAAATTAATGTGATTAATTGTAATTAATTAATTTTGGTGTGCAGGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGGTAATTAAATTCAATTTATTTGTGAAAATGAAAATATTACTCCTTCATTTATATTAGTTAATTAAAAAAAAACAATATTTTTGGTCCTTAAACTTTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGATGAATTCGCATAAGATATCACAAGATAGACGTACCACAACCTTCTTTTATATTTTGATTATCATTATGGTTCATTTTTTTCTTTTTAAATTTTGTAA

mRNA sequence

ATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGA

Coding sequence (CDS)

ATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGA

Protein sequence

MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS*
Homology
[Close]
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.3e-61
Identity = 114/179 (63.69%), Postives = 139/179 (77.65%), Query Frame = 1 

Query: 15  DQSLPGFRFFPTEEELVLFYLHNQLQGCRKD-IHRVIPVVDIYEIEPFNLSRYSGERCRR 74
           D+   GFRF+PTEEELV FYL NQL+G   D +HRVIPV+D++E+EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 75  DSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 134
           D+EQWFFFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +N++IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 135 KAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 193
           KAPTG KTKWKMNEY A+ + +      +++ IP+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDETV------NASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50
Identity = 103/178 (57.87%), Postives = 123/178 (69.10%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRF+PTE EL+ +YL  QL G    IH +IP++D++ +EP  L   +GERCR D+EQW 
Sbjct: 8   GFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWI 67

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           FFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +NRVIGVKKTMVFY GKAPTG 
Sbjct: 68  FFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 127

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEYKA++         S + IP+             SGS RAFDRRP +AY+
Sbjct: 128 KTKWKMNEYKAVETA-------SVSTIPK-------------SGSSRAFDRRPTEAYA 163

[Close]
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match: NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 1 

Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           ++ + D  +PGFRF PTEEEL+ FYL  +++G R ++  +I  +D+Y  +P+ L   +  
Sbjct: 44  DDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVE-LITFLDLYRYDPWELPAMAAI 103

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKT 129
           GE+      +W+F+V +  +   G R NR T+SG  YWKATG+   + S  +R IG+KKT
Sbjct: 104 GEK------EWYFYVPRDRKYRNGDRPNRVTTSG--YWKATGADRMIRSETSRPIGLKKT 163

Query: 130 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           +VFY GKAP GT+T W MNEY+     +P H           + E SLCRVY
Sbjct: 164 LVFYSGKAPKGTRTSWIMNEYR-----LPHHETEK-----YQKAEISLCRVY 196

[Close]
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match: FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-27
Identity = 66/175 (37.71%), Postives = 108/175 (61.71%), Query Frame = 1 

Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           +++ ED  LPGFRF PT+EELV FYL  ++Q     I  +I  +DIY+ +P++L +++  
Sbjct: 9   DQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIE-LIRQLDIYKYDPWDLPKFAMT 68

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSE-NRVIGVKK 129
           GE+      +W+F+  +  +     R NR T  G+G+WKATG+   +YSSE N+ IG+KK
Sbjct: 69  GEK------EWYFYCPRDRKYRNSSRPNRVT--GAGFWKATGTDRPIYSSEGNKCIGLKK 128

Query: 130 TMVFYRGKAPTGTKTKWKMNEYK--AIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           ++VFY+G+A  G KT W M+E++  ++ +  PP   F  +P+      +++CR++
Sbjct: 129 SLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSP-NDSWAICRIF 173

[Close]
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match: NTL9_ARATH (Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-25
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 1 

Query: 16  QSLP-GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRD 75
           +SLP GFRF PT+EELV  YL  ++ G   D+ RVIP +D+ + EP++L   S    + D
Sbjct: 7   ESLPLGFRFRPTDEELVNHYLRLKINGRHSDV-RVIPDIDVCKWEPWDLPALSV--IKTD 66

Query: 76  SEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGK 135
             +WFFF  +  +   G R+NR T SG  YWKATG    +  S+  +IG+KKT+VFYRG+
Sbjct: 67  DPEWFFFCPRDRKYPNGHRSNRATDSG--YWKATGKDRSI-KSKKTLIGMKKTLVFYRGR 126

Query: 136 APTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           AP G +T W M+EY+     +   SP  S         + LCR++
Sbjct: 127 APKGERTNWIMHEYRPTLKDLDGTSPGQS--------PYVLCRLF 157

[Close]
BLAST of Csa6G425720.1 vs. TrEMBL
Match: A0A0A0KEE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425720 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.3e-112
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP
Sbjct: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPLKAYS
Sbjct: 181 VSGSFRAFDRRPLKAYS 197

[Close]
BLAST of Csa6G425720.1 vs. TrEMBL
Match: A0A0D2QPI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G122800 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.6e-68
Identity = 125/178 (70.22%), Postives = 154/178 (86.52%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRFFPTEEELV FYL NQL G R+++H VIPV++IY++EP++L + +GERCRRD+EQWF
Sbjct: 6   GFRFFPTEEELVSFYLRNQLDGRRQEMHSVIPVLNIYDVEPWDLPQLAGERCRRDTEQWF 65

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           +F  +QER+ARGGRANRTT+  SGYWKATGSP+YVYSS++RVIG+KKTMVFY+GKAP+G 
Sbjct: 66  YFTPRQEREARGGRANRTTA--SGYWKATGSPSYVYSSDDRVIGMKKTMVFYKGKAPSGK 125

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEY+AI+ +    +P + T  P LRHEFSLCR+YVVSGSFRAFDRRPL+  S
Sbjct: 126 KTKWKMNEYRAIEAV---PNPTAVTTTPMLRHEFSLCRIYVVSGSFRAFDRRPLEPVS 178

[Close]
BLAST of Csa6G425720.1 vs. TrEMBL
Match: L7X5Z3_GOSHI (NAC protein 13 OS=Gossypium hirsutum GN=NAC13 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.6e-68
Identity = 125/178 (70.22%), Postives = 154/178 (86.52%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRFFPTEEELV FYL NQL G R+++H VIPV++IY++EP++L + +GERCRRD+EQWF
Sbjct: 6   GFRFFPTEEELVSFYLRNQLDGRRQEMHSVIPVLNIYDVEPWDLPQLAGERCRRDTEQWF 65

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           +F  +QER+ARGGRANRTT+  SGYWKATGSP+YVYSS++RVIG+KKTMVFY+GKAP+G 
Sbjct: 66  YFTPRQEREARGGRANRTTA--SGYWKATGSPSYVYSSDDRVIGMKKTMVFYKGKAPSGK 125

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEY+AI+ +    +P + T  P LRHEFSLCR+YVVSGSFRAFDRRPL+  S
Sbjct: 126 KTKWKMNEYRAIEAV---PNPTAVTRTPMLRHEFSLCRIYVVSGSFRAFDRRPLETVS 178

[Close]
BLAST of Csa6G425720.1 vs. TrEMBL
Match: A0A0M4G3P6_MANES (NAC transcription factors 36 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.3e-68
Identity = 124/177 (70.06%), Postives = 150/177 (84.75%), Query Frame = 1 

Query: 19  PGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQW 78
           PG RF+PTEEELV FYLHN+L+G R+++ RVIPV++IY  EP+NL + +GERCR D+EQW
Sbjct: 6   PGLRFYPTEEELVSFYLHNKLEGKRQELDRVIPVINIYNQEPWNLPKLAGERCRGDTEQW 65

Query: 79  FFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTG 138
           FFF  +QER+ARGGR NRTT   +GYWKATGSP YVYSS+NRVIGVKKTMVFY+GKAP G
Sbjct: 66  FFFTPRQEREARGGRPNRTTE--TGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGKAPAG 125

Query: 139 TKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKA 196
            KTKWKMNEY+AI+++   +    +T +P LRHEFSLCRVYV+SGSFRAFDRRPL+A
Sbjct: 126 RKTKWKMNEYRAIEEVADSY----NTAVPMLRHEFSLCRVYVISGSFRAFDRRPLEA 176

[Close]
BLAST of Csa6G425720.1 vs. TrEMBL
Match: R4N7M3_JATCU (NAC transcription factor 037 OS=Jatropha curcas GN=JCGZ_12708 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.3e-68
Identity = 125/177 (70.62%), Postives = 151/177 (85.31%), Query Frame = 1 

Query: 19  PGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQW 78
           PGFRF+PTEEELV FYLHN+L+  R++++RVIPV DIY IEP+NL + +GERC+ D+EQW
Sbjct: 6   PGFRFYPTEEELVSFYLHNKLEERRQELNRVIPVTDIYNIEPWNLPKLAGERCQGDTEQW 65

Query: 79  FFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTG 138
           FFF  +QER+ARGGR  RTT+  SGYWKATGSP YVYSS+++VIGVKKTMVFY+GKAPTG
Sbjct: 66  FFFAPRQEREARGGRPRRTTA--SGYWKATGSPGYVYSSDSKVIGVKKTMVFYKGKAPTG 125

Query: 139 TKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKA 196
            KTKWKMNEY+AI+    P    S+T +P+LRHEFSLCRVY+ SGSFRAFDRRPL+A
Sbjct: 126 RKTKWKMNEYRAIEGAADP----SNTTVPKLRHEFSLCRVYITSGSFRAFDRRPLEA 176

[Close]
BLAST of Csa6G425720.1 vs. TAIR10
Match: AT5G22380.1 (AT5G22380.1 NAC domain containing protein 90)

HSP 1 Score: 235.0 bits (598), Expect = 4.1e-62
Identity = 114/179 (63.69%), Postives = 139/179 (77.65%), Query Frame = 1 

Query: 15  DQSLPGFRFFPTEEELVLFYLHNQLQGCRKD-IHRVIPVVDIYEIEPFNLSRYSGERCRR 74
           D+   GFRF+PTEEELV FYL NQL+G   D +HRVIPV+D++E+EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 75  DSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 134
           D+EQWFFFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +N++IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 135 KAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 193
           KAPTG KTKWKMNEY A+ + +      +++ IP+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDETV------NASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]
BLAST of Csa6G425720.1 vs. TAIR10
Match: AT3G44350.2 (AT3G44350.2 NAC domain containing protein 61)

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-60
Identity = 111/178 (62.36%), Postives = 134/178 (75.28%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRF+PTE EL+ +YL  QL G    IH +IP++D++ +EP  L   +GERCR D+EQW 
Sbjct: 8   GFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWI 67

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           FFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +NRVIGVKKTMVFY GKAPTG 
Sbjct: 68  FFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 127

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEYKA++         S + IP+LR EFS+CR+Y+ SGS RAFDRRP +AY+
Sbjct: 128 KTKWKMNEYKAVETA-------SVSTIPKLRPEFSICRIYIKSGSSRAFDRRPTEAYA 176

[Close]
BLAST of Csa6G425720.1 vs. TAIR10
Match: AT2G02450.2 (AT2G02450.2 NAC domain containing protein 35)

HSP 1 Score: 131.3 bits (329), Expect = 6.4e-31
Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 1 

Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           ++ + D  +PGFRF PTEEEL+ FYL  +++G R ++  +I  +D+Y  +P+ L   +  
Sbjct: 44  DDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVE-LITFLDLYRYDPWELPAMAAI 103

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKT 129
           GE+      +W+F+V +  +   G R NR T+SG  YWKATG+   + S  +R IG+KKT
Sbjct: 104 GEK------EWYFYVPRDRKYRNGDRPNRVTTSG--YWKATGADRMIRSETSRPIGLKKT 163

Query: 130 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           +VFY GKAP GT+T W MNEY+     +P H           + E SLCRVY
Sbjct: 164 LVFYSGKAPKGTRTSWIMNEYR-----LPHHETEK-----YQKAEISLCRVY 196

[Close]
BLAST of Csa6G425720.1 vs. TAIR10
Match: AT2G17040.1 (AT2G17040.1 NAC domain containing protein 36)

HSP 1 Score: 127.9 bits (320), Expect = 7.1e-30
Identity = 74/180 (41.11%), Postives = 104/180 (57.78%), Query Frame = 1 

Query: 14  EDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRR 73
           +D  LPGFRF PTEEEL+ FYL N + G R  +  VI  ++IY  +P++L   S    R 
Sbjct: 3   KDIELPGFRFHPTEEELLDFYLKNMVYGKRSSVE-VIGFLNIYRHDPWDLPGLS----RI 62

Query: 74  DSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYV--YSSENRVIGVKKTMVFY 133
              +W+FFV ++ +   GGR +RTT    GYWKATGS   +   S   RVIG+KKT+VFY
Sbjct: 63  GEREWYFFVPRERKHGNGGRPSRTTE--KGYWKATGSDRKIISLSEPKRVIGLKKTLVFY 122

Query: 134 RGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRR 192
           RG+AP G+KT W MNE++     +P +          L  +  LC++Y  + S +  ++R
Sbjct: 123 RGRAPGGSKTDWVMNEFR-----MPDNC--------SLPKDVVLCKIYRKATSLKVLEQR 162

[Close]
BLAST of Csa6G425720.1 vs. TAIR10
Match: AT1G26870.1 (AT1G26870.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-28
Identity = 66/175 (37.71%), Postives = 108/175 (61.71%), Query Frame = 1 

Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           +++ ED  LPGFRF PT+EELV FYL  ++Q     I  +I  +DIY+ +P++L +++  
Sbjct: 16  DQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIE-LIRQLDIYKYDPWDLPKFAMT 75

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSE-NRVIGVKK 129
           GE+      +W+F+  +  +     R NR T  G+G+WKATG+   +YSSE N+ IG+KK
Sbjct: 76  GEK------EWYFYCPRDRKYRNSSRPNRVT--GAGFWKATGTDRPIYSSEGNKCIGLKK 135

Query: 130 TMVFYRGKAPTGTKTKWKMNEYK--AIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           ++VFY+G+A  G KT W M+E++  ++ +  PP   F  +P+      +++CR++
Sbjct: 136 SLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSP-NDSWAICRIF 180

[Close]
BLAST of Csa6G425720.1 vs. NCBI nr
Match: gi|449444999|ref|XP_004140261.1| (PREDICTED: NAC domain-containing protein 90 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP
Sbjct: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPLKAYS
Sbjct: 181 VSGSFRAFDRRPLKAYS 197

[Close]
BLAST of Csa6G425720.1 vs. NCBI nr
Match: gi|659097361|ref|XP_008449583.1| (PREDICTED: NAC domain-containing protein 90-like [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 3.8e-102
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 1 

Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDH+  I  EEEEEDQ LPGFRFFPTEEELVLFYLHNQLQG RKDIHRVIPVVDIYEIEP
Sbjct: 5   MDHE-AIREEEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEP 64

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 65  FNLSRYSGERCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENR 124

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPH P SSTPIPQLRHEFSLCRVYV
Sbjct: 125 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQLRHEFSLCRVYV 184

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPL+ Y+
Sbjct: 185 VSGSFRAFDRRPLEVYN 200

[Close]
BLAST of Csa6G425720.1 vs. NCBI nr
Match: gi|823123720|ref|XP_012477074.1| (PREDICTED: NAC domain-containing protein 90-like [Gossypium raimondii])

HSP 1 Score: 265.4 bits (677), Expect = 8.0e-68
Identity = 125/178 (70.22%), Postives = 154/178 (86.52%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRFFPTEEELV FYL NQL G R+++H VIPV++IY++EP++L + +GERCRRD+EQWF
Sbjct: 6   GFRFFPTEEELVSFYLRNQLDGRRQEMHSVIPVLNIYDVEPWDLPQLAGERCRRDTEQWF 65

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           +F  +QER+ARGGRANRTT+  SGYWKATGSP+YVYSS++RVIG+KKTMVFY+GKAP+G 
Sbjct: 66  YFTPRQEREARGGRANRTTA--SGYWKATGSPSYVYSSDDRVIGMKKTMVFYKGKAPSGK 125

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEY+AI+ +    +P + T  P LRHEFSLCR+YVVSGSFRAFDRRPL+  S
Sbjct: 126 KTKWKMNEYRAIEAV---PNPTAVTTTPMLRHEFSLCRIYVVSGSFRAFDRRPLEPVS 178

[Close]
BLAST of Csa6G425720.1 vs. NCBI nr
Match: gi|443682306|gb|AGC97443.1| (NAC protein 13 [Gossypium hirsutum])

HSP 1 Score: 265.4 bits (677), Expect = 8.0e-68
Identity = 125/178 (70.22%), Postives = 154/178 (86.52%), Query Frame = 1 

Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRFFPTEEELV FYL NQL G R+++H VIPV++IY++EP++L + +GERCRRD+EQWF
Sbjct: 6   GFRFFPTEEELVSFYLRNQLDGRRQEMHSVIPVLNIYDVEPWDLPQLAGERCRRDTEQWF 65

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           +F  +QER+ARGGRANRTT+  SGYWKATGSP+YVYSS++RVIG+KKTMVFY+GKAP+G 
Sbjct: 66  YFTPRQEREARGGRANRTTA--SGYWKATGSPSYVYSSDDRVIGMKKTMVFYKGKAPSGK 125

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEY+AI+ +    +P + T  P LRHEFSLCR+YVVSGSFRAFDRRPL+  S
Sbjct: 126 KTKWKMNEYRAIEAV---PNPTAVTRTPMLRHEFSLCRIYVVSGSFRAFDRRPLETVS 178

[Close]
BLAST of Csa6G425720.1 vs. NCBI nr
Match: gi|925170193|gb|ALC79013.1| (NAC transcription factors 36 [Manihot esculenta])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 124/177 (70.06%), Postives = 150/177 (84.75%), Query Frame = 1 

Query: 19  PGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQW 78
           PG RF+PTEEELV FYLHN+L+G R+++ RVIPV++IY  EP+NL + +GERCR D+EQW
Sbjct: 6   PGLRFYPTEEELVSFYLHNKLEGKRQELDRVIPVINIYNQEPWNLPKLAGERCRGDTEQW 65

Query: 79  FFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTG 138
           FFF  +QER+ARGGR NRTT   +GYWKATGSP YVYSS+NRVIGVKKTMVFY+GKAP G
Sbjct: 66  FFFTPRQEREARGGRPNRTTE--TGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGKAPAG 125

Query: 139 TKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKA 196
            KTKWKMNEY+AI+++   +    +T +P LRHEFSLCRVYV+SGSFRAFDRRPL+A
Sbjct: 126 RKTKWKMNEYRAIEEVADSY----NTAVPMLRHEFSLCRVYVISGSFRAFDRRPLEA 176

The following BLAST results are available for this feature:
BLAST of Csa6G425720.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC90_ARATH7.3e-6163.69NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1[more]
NAC61_ARATH1.2e-5057.87Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2... [more]
NAC35_ARATH1.1e-2941.28NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2[more]
FEZ_ARATH2.4e-2737.71Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1[more]
NTL9_ARATH2.2e-2541.82Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1[more]
BLAST of Csa6G425720.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEE9_CUCSA8.3e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425720 PE=4 SV=1[more]
A0A0D2QPI2_GOSRA5.6e-6870.22Uncharacterized protein OS=Gossypium raimondii GN=B456_001G122800 PE=4 SV=1[more]
L7X5Z3_GOSHI5.6e-6870.22NAC protein 13 OS=Gossypium hirsutum GN=NAC13 PE=2 SV=1[more]
A0A0M4G3P6_MANES7.3e-6870.06NAC transcription factors 36 OS=Manihot esculenta PE=2 SV=1[more]
R4N7M3_JATCU7.3e-6870.62NAC transcription factor 037 OS=Jatropha curcas GN=JCGZ_12708 PE=4 SV=1[more]
BLAST of Csa6G425720.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22380.14.1e-6263.69 NAC domain containing protein 90[more]
AT3G44350.22.3e-6062.36 NAC domain containing protein 61[more]
AT2G02450.26.4e-3141.28 NAC domain containing protein 35[more]
AT2G17040.17.1e-3041.11 NAC domain containing protein 36[more]
AT1G26870.11.3e-2837.71 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
BLAST of Csa6G425720.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444999|ref|XP_004140261.1|1.2e-111100.00PREDICTED: NAC domain-containing protein 90 [Cucumis sativus][more]
gi|659097361|ref|XP_008449583.1|3.8e-10293.40PREDICTED: NAC domain-containing protein 90-like [Cucumis melo][more]
gi|823123720|ref|XP_012477074.1|8.0e-6870.22PREDICTED: NAC domain-containing protein 90-like [Gossypium raimondii][more]
gi|443682306|gb|AGC97443.1|8.0e-6870.22NAC protein 13 [Gossypium hirsutum][more]
gi|925170193|gb|ALC79013.1|1.0e-6770.06NAC transcription factors 36 [Manihot esculenta][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa6G425720Csa6G425720gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa6G425720.1Csa6G425720.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa6G425720.1.cds1Csa6G425720.1.cds1CDS
Csa6G425720.1.cds2Csa6G425720.1.cds2CDS
Csa6G425720.1.cds3Csa6G425720.1.cds3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa6G425720.1.utr3p1Csa6G425720.1.utr3p1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 19..149
score: 8.7
IPR003441NAC domainPROFILEPS51005NACcoord: 17..181
score: 43
IPR003441NAC domainunknownSSF101941NAC domaincoord: 18..180
score: 1.18
NoneNo IPR availablePANTHERPTHR31989FAMILY NOT NAMEDcoord: 1..193
score: 1.5E
NoneNo IPR availablePANTHERPTHR31989:SF4NAC DOMAIN-CONTAINING PROTEIN 61-RELATEDcoord: 1..193
score: 1.5E