Csa6G211860 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCCAATATGCACATCATGCTTAGATGCTTACATGATGTAAGATTTCCTTTTAATATATATACGTCATTGATGGTTGCGGTCTCCTTTTAATTGTAATGTCATTTCATTGTGTAGGTACCTTCACACAATTATGGTACAAGGACAAAGTTTAAACTTGTTCAAGTTCATGGATGTCGGATCTGAAAGTTACTCGAGTTATAAACAATCACGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAATATTGTTTCCATACAACTCTGGGTAAGTGCATTATAATGACATTTTCATTAACATTCACGATTTGAATTCACTATTAAAATATTAATTTATAATGGTGGAAATGTGTTCTTAGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCGGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTAGGTCATATTATTGTCGTTAATGTCTTATTATGTGTGCAACTATTTTAATTATGTAACAATCTTATATTATGTGGTAGGTCATTCGATATATCAAAGAAGAAAAAACCGAGTTGAAAGGTTGTTAAGGTATGTGGCATTGACCAATAGGATAGTCGTAAATAAGTTATTAATCTAAACGTTTCACACGTATTTTTTTTATTCTA ATGCAGCCAATATGCACATCATGCTTAGATGCTTACATGATGTACCTTCACACAATTATGGTACAAGGACAAAGTTTAAACTTGTTCAAGTTCATGGATGTCGGATCTGAAAGTTACTCGAGTTATAAACAATCACGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAATATTGTTTCCATACAACTCTGGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCGGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTCATTCGATATATCAAAGAAGAAAAAACCGAGTTGA ATGCAGCCAATATGCACATCATGCTTAGATGCTTACATGATGTACCTTCACACAATTATGGTACAAGGACAAAGTTTAAACTTGTTCAAGTTCATGGATGTCGGATCTGAAAGTTACTCGAGTTATAAACAATCACGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAATATTGTTTCCATACAACTCTGGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCGGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTCATTCGATATATCAAAGAAGAAAAAACCGAGTTGA MQPICTSCLDAYMMYLHTIMVQGQSLNLFKFMDVGSESYSSYKQSRAQLLNARLLGAEYDQVILFPYNSGNHWTLVVVNPTKGAAYWIDPLKNRIDGDMSEVLQMSFDISKKKKPS*
BLAST of Csa6G211860 vs. TrEMBL
Match: A0A0A0KEE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G211860 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.9e-60 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa6G211860 vs. TrEMBL
Match: A0A0A0LWT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G319810 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 7.7e-25 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 1
BLAST of Csa6G211860 vs. TrEMBL
Match: M5VTB9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017620mg PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.2e-10 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1
BLAST of Csa6G211860 vs. TrEMBL
Match: M5W4V6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015484mg PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.8e-09 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 1
BLAST of Csa6G211860 vs. TrEMBL
Match: M5XRB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019926mg PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-08 Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = 1
BLAST of Csa6G211860 vs. NCBI nr
Match: gi|700192010|gb|KGN47214.1| (hypothetical protein Csa_6G211860 [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 2.8e-60 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa6G211860 vs. NCBI nr
Match: gi|700210216|gb|KGN65312.1| (hypothetical protein Csa_1G319810 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 1
BLAST of Csa6G211860 vs. NCBI nr
Match: gi|659105267|ref|XP_008453054.1| (PREDICTED: uncharacterized protein LOC103493876 [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 8.8e-22 Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 1
BLAST of Csa6G211860 vs. NCBI nr
Match: gi|659069187|ref|XP_008448556.1| (PREDICTED: uncharacterized protein LOC103490696 [Cucumis melo]) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-20 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1
BLAST of Csa6G211860 vs. NCBI nr
Match: gi|764595375|ref|XP_004300546.2| (PREDICTED: uncharacterized protein LOC101303909 [Fragaria vesca subsp. vesca]) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10 Identity = 34/91 (37.36%), Postives = 55/91 (60.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|