BLAST of Csa6G197240 vs. Swiss-Prot
Match:
PP313_ARATH (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1)
HSP 1 Score: 643.7 bits (1659), Expect = 2.1e-183
Identity = 326/567 (57.50%), Postives = 422/567 (74.43%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
H++ LKLGF ++T VNHL+ YV+ + I TA +LFDEM PNVVSWTS+++GY D G+P
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 107 STALFLFGEMLRS-PVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSS 166
AL +F +M PV PN++TFA+ KACS L+ R G+ HA +EI G NIVV SS
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 167 LIDMYGKCNDVVKARGVFNSMSC--KNIVSWTSMIAAYAQNAHGDEALKVFREFTS-LSS 226
L+DMYGKCNDV AR VF+SM +N+VSWTSMI AYAQNA G EA+++FR F + L+S
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 227 EHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSD 286
+ N +MLASVISAC+SLGRL GKV HG G +S+ VVA+ L+DMYAKCGSL ++
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 287 KVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSG 346
K+F RI SVI YTSMI++ AK+G G +++LF+EMV + PN++TL+GVLHACSHSG
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSG 351
Query: 347 LPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWG 406
L NEGL YL+ M EKYG++P+++HYTCVVDML R G +D+A++LAK+++V + ALLWG
Sbjct: 352 LVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWG 411
Query: 407 ALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTG 466
ALLSA R HGRV+I +EA ++L+ SN+QV AY+ LSN YA +G E + LR+EMKR+G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Query: 467 VHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGL---- 526
KE CSWIE KDS Y+F+AG++ SC E+ L++L+++MK+RG+ RG +
Sbjct: 472 NVKERACSWIENKDSVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTS 531
Query: 527 --VFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEI 586
VFVD++EEA++E V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEI
Sbjct: 532 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 591
Query: 587 MEREFVVRDINRFHHFKNGCCTCNGFW 604
+ERE VVRD+NRFH FKNG CTC +W
Sbjct: 592 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
HSP 2 Score: 115.5 bits (288), Expect = 2.0e-24
Identity = 83/268 (30.97%), Postives = 128/268 (47.76%), Query Frame = 1
Query: 20 ERPFLQTIENLSRHLRNCNDLISSISTHSIALKL---GFLNNTVNVNHLINCYVRFRSIA 79
+RP + + C+ L S +I +L G N V + L++ Y + +
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 80 TAHQLFDEMPN--PNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVP--NDFTFATAI 139
TA ++FD M NVVSWTS++ Y N + A+ LF + N F A+ I
Sbjct: 184 TARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVI 243
Query: 140 KACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIV 199
ACS L L+ G++ H V GY N VV +SL+DMY KC + A +F + C +++
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVI 303
Query: 200 SWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSG-KVMHG 259
S+TSMI A A++ G+ A+K+F E + +PN L V+ AC+ G + G + +
Sbjct: 304 SYTSMIMAKAKHGLGEAAVKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 363
Query: 260 AAISLGCDSSEVVASVLVDMYAKCGSLD 280
A G + +VDM + G +D
Sbjct: 364 MAEKYGVVPDSRHYTCVVDMLGRFGRVD 390
HSP 3 Score: 111.3 bits (277), Expect = 3.7e-23
Identity = 95/353 (26.91%), Postives = 155/353 (43.91%), Query Frame = 1
Query: 99 GYVDNGQ--PSTALFLFGEMLRSPVVPNDF----TFATAIKACSILSNLRHGEMFHAHVE 158
G++ N P+T+LF+ P NDF T A + S +N + H
Sbjct: 4 GFIQNVHLAPATSLFV-------PQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTL 63
Query: 159 IFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALK 218
G+ + + L+ Y K ++ AR +F+ M N+VSWTS+I+ Y AL
Sbjct: 64 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 123
Query: 219 VFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMY 278
+F++ PN Y ASV AC++L GK +H G + VV+S LVDMY
Sbjct: 124 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 183
Query: 279 AKCGSLDYSDKVFNRI--SNPSVIPYTSMIVSTAKYGFGRKSLQLFEEM--VRKGLKPNH 338
KC ++ + +VF+ + +V+ +TSMI + A+ G ++++LF + N
Sbjct: 184 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ 243
Query: 339 ITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAK 398
L V+ ACS G G + + G T T ++DM A+ G L A +
Sbjct: 244 FMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 303
Query: 399 SMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNV 442
+ + + +++ A HG + A + ++V ++ YVTL V
Sbjct: 304 RIRC---HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG--RINPNYVTLLGV 343
BLAST of Csa6G197240 vs. Swiss-Prot
Match:
PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 406.4 bits (1043), Expect = 5.6e-112
Identity = 213/542 (39.30%), Postives = 318/542 (58.67%), Query Frame = 1
Query: 63 NHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVV 122
N ++N Y + A +LFDEM + SWT+++ GYV QP AL L+ M R P
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 -PNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 182
PN FT + A+ A + + +R G+ H H+ G + V+ SSL+DMYGKC + +AR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 242
+F+ + K++VSWTSMI Y +++ E +F E S E PN Y A V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 302
GK +HG +G D +S LVDMY KCG+++ + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 362
A+ G ++L+ F+ +++ G KP+H+T V VL AC+H+GL +GL + S+ EK+ +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 422
+ HYTC+VD+LAR G ++ + M + P LW ++L +G +D+A EA
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 482
Q+L + YVT++N+YA+AG E+ K+R M+ GV K PG SW EIK ++F
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 542
A + TS P ++++ LREL +KMK+ GYV LV D+E+E +EE + HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQKEENLVYHSEKLAV 634
Query: 543 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 602
F ++S +G I++ KNLR C DCH A K IS I +R+ VRD RFH F+NG C+C
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691
Query: 603 FW 604
+W
Sbjct: 695 YW 691
HSP 2 Score: 395.2 bits (1014), Expect = 1.3e-108
Identity = 220/616 (35.71%), Postives = 331/616 (53.73%), Query Frame = 1
Query: 20 ERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAH 79
++P T NL + L H GF+ V N L+ Y + S+ A
Sbjct: 81 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDAR 140
Query: 80 QLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVV----------------- 139
++FDEMPN ++ SW ++ GY + G A LF EM
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 140 ---------------PNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLI 199
PN FT + A+ A + + +R G+ H H+ G + V+ SSL+
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 200 DMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNP 259
DMYGKC + +AR +F+ + K++VSWTSMI Y +++ E +F E S E PN
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNE 320
Query: 260 YMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNR 319
Y A V++ACA L GK +HG +G D +S LVDMY KCG+++ + V +
Sbjct: 321 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 380
Query: 320 ISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEG 379
P ++ +TS+I A+ G ++L+ F+ +++ G KP+H+T V VL AC+H+GL +G
Sbjct: 381 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 440
Query: 380 LYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSA 439
L + S+ EK+ + + HYTC+VD+LAR G ++ + M + P LW ++L
Sbjct: 441 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGG 500
Query: 440 SRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEP 499
+G +D+A EA Q+L + YVT++N+YA+AG E+ K+R M+ GV K P
Sbjct: 501 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 560
Query: 500 GCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEA 559
G SW EIK ++F A + TS P ++++ LREL +KMK+ GYV LV D+E+E
Sbjct: 561 GSSWTEIKRKRHVFIAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQ 620
Query: 560 EEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDIN 604
+EE + HSE+LA+ F ++S +G I++ KNLR C DCH A K IS I +R+ VRD
Sbjct: 621 KEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDST 680
BLAST of Csa6G197240 vs. Swiss-Prot
Match:
PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 3.4e-109
Identity = 219/594 (36.87%), Postives = 335/594 (56.40%), Query Frame = 1
Query: 15 LSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRS 74
LS+E+ P QT E L + + L ++ H L G + LI Y S
Sbjct: 69 LSQESS-PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128
Query: 75 IATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKA 134
+ A ++FD+ + W +L G L L+ +M R V + FT+ +KA
Sbjct: 129 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188
Query: 135 C----SILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKN 194
C +++L G+ HAH+ GY ++ + ++L+DMY + V A VF M +N
Sbjct: 189 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 248
Query: 195 IVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH-PNPYMLASVISACASLGRLVSGKVM 254
+VSW++MIA YA+N EAL+ FRE + + PN + SV+ ACASL L GK++
Sbjct: 249 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 308
Query: 255 HGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFG 314
HG + G DS V S LV MY +CG L+ +VF+R+ + V+ + S+I S +G+G
Sbjct: 309 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 368
Query: 315 RKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTC 374
+K++Q+FEEM+ G P +T V VL ACSH GL EG +M+ +GI P+ +HY C
Sbjct: 369 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 428
Query: 375 VVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNR 434
+VD+L R LD+A + + M P K +WG+LL + R HG V++A A ++L
Sbjct: 429 MVDLLGRANRLDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEP 488
Query: 435 QVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSC 494
+ AG YV L+++YA A ++ +++ ++ G+ K PG W+E++ Y F + + +
Sbjct: 489 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN- 548
Query: 495 PRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIP 554
P +++ L +L + MK++GY+ KG+++ ++E E +E V HSE+LAL FGLI+
Sbjct: 549 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTS 608
Query: 555 KGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNGFW 604
KG IRI KNLR+C DCH K IS+ ME+E +VRD+NRFH FKNG C+C +W
Sbjct: 609 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Csa6G197240 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 396.0 bits (1016), Expect = 7.5e-109
Identity = 211/559 (37.75%), Postives = 323/559 (57.78%), Query Frame = 1
Query: 45 STHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNG 104
+ HSI +K F N L++ Y + + +A +F EM + +VVS+TS++AGY G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 105 QPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCS 164
A+ LF EM + P+ +T + C+ L G+ H ++ G +I V +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 165 SLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 224
+L+DMY KC + +A VF+ M K+I+SW ++I Y++N + +EAL +F
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 225 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 284
P+ +A V+ ACASL G+ +HG + G S VA+ LVDMYAKCG+L + +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 285 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 344
F+ I++ ++ +T MI +GFG++++ LF +M + G++ + I+ V +L+ACSHSGL
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 345 NEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGAL 404
+EG + M + I P +HY C+VDMLAR G+L KA+ ++M + PD A +WGAL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD--ATIWGAL 676
Query: 405 LSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVH 464
L R H V +A + +++ + G YV ++N+YA A E+ +LR + + G+
Sbjct: 677 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 736
Query: 465 KEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIE 524
K PGCSWIEIK IF AG+ +S P + + LR++ +M + GY K +D E
Sbjct: 737 KNPGCSWIEIKGRVNIFVAGD-SSNPETENIEAFLRKVRARMIEEGYSPLTK-YALIDAE 796
Query: 525 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 584
E +EE + HSE+LA+ G+IS G IR+ KNLR+C DCHE K +S++ RE V+R
Sbjct: 797 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 856
Query: 585 DINRFHHFKNGCCTCNGFW 604
D NRFH FK+G C+C GFW
Sbjct: 857 DSNRFHQFKDGHCSCRGFW 871
HSP 2 Score: 157.9 bits (398), Expect = 3.4e-37
Identity = 110/388 (28.35%), Postives = 184/388 (47.42%), Query Frame = 1
Query: 26 TIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEM 85
T +S+ + + H LK GF N L+ Y++ + + +A ++FDEM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 86 PNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGE 145
+V+SW S++ GYV NG L +F +ML S + + T + C+ + G
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 146 MFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNA 205
H+ + C++L+DMY KC D+ A+ VF MS +++VS+TSMIA YA+
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 206 HGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVA 265
EA+K+F E P+ Y + +V++ CA L GK +H V+
Sbjct: 377 LAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 436
Query: 266 SVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMV-RKGL 325
+ L+DMYAKCGS+ ++ VF+ + +I + ++I +K + ++L LF ++ K
Sbjct: 437 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 496
Query: 326 KPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAF 385
P+ T+ VL AC+ ++G + + G + +VDM A+ G L A
Sbjct: 497 SPDERTVACVLPACASLSAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 556
Query: 386 DLAKSMDVAPDDKALLWGALLSASRCHG 413
L D+A D + W +++ HG
Sbjct: 557 MLFD--DIASKD-LVSWTVMIAGYGMHG 579
HSP 3 Score: 150.2 bits (378), Expect = 7.2e-35
Identity = 90/294 (30.61%), Postives = 150/294 (51.02%), Query Frame = 1
Query: 54 GFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLF 113
GF+ ++ + L Y + A ++FDE+ + W LM +G S ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 114 GEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKC 173
+M+ S V + +TF+ K+ S L ++ GE H + G+G V +SL+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 174 NDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASV 233
V AR VF+ M+ ++++SW S+I Y N ++ L VF + +S + + SV
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSV 303
Query: 234 ISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSV 293
+ CA + G+ +H + + + L+DMY+KCG LD + VF +S+ SV
Sbjct: 304 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 363
Query: 294 IPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEG 348
+ YTSMI A+ G ++++LFEEM +G+ P+ T+ VL+ C+ L +EG
Sbjct: 364 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
BLAST of Csa6G197240 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 395.2 bits (1014), Expect = 1.3e-108
Identity = 206/559 (36.85%), Postives = 329/559 (58.86%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPN--VVSWTSLMAGYVDNG 106
H+ +LGF + N LI Y + R + +A +F+ +P P +VSWT++++ Y NG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 107 QPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCS 166
+P AL +F +M + V P+ + + A + L +L+ G HA V G +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 167 SLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 226
SL MY KC V A+ +F+ M N++ W +MI+ YA+N + EA+ +F E +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVR 321
Query: 227 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 286
P+ + S ISACA +G L + M+ ++S L+DM+AKCGS++ + V
Sbjct: 322 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 381
Query: 287 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 346
F+R + V+ +++MIV +G R+++ L+ M R G+ PN +T +G+L AC+HSG+
Sbjct: 382 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 441
Query: 347 NEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGAL 406
EG ++ M + + I P+ +HY CV+D+L R G LD+A+++ K M V P +WGAL
Sbjct: 442 REGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG--VTVWGAL 501
Query: 407 LSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVH 466
LSA + H V++ A QQL + + G YV LSN+YA+A ++ ++RV MK G++
Sbjct: 502 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 561
Query: 467 KEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIE 526
K+ GCSW+E++ F G+ S PR +E+ + ++ ++K+ G+V + + D+
Sbjct: 562 KDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEWIESRLKEGGFVANKDASLH-DLN 621
Query: 527 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 586
+E EE + HSER+A+ +GLIS P+G +RI KNLR C +CH A KLIS++++RE VVR
Sbjct: 622 DEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVR 681
Query: 587 DINRFHHFKNGCCTCNGFW 604
D NRFHHFK+G C+C +W
Sbjct: 682 DTNRFHHFKDGVCSCGDYW 694
HSP 2 Score: 196.1 bits (497), Expect = 1.1e-48
Identity = 117/375 (31.20%), Postives = 195/375 (52.00%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
H+ L LG + + LI+ F I A Q+FD++P P + W +++ GY N
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSL 166
AL ++ M + V P+ FTF +KACS LS+L+ G HA V G+ ++ V + L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 167 IDMYGKCNDVVKARGVFNSMSC--KNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 226
I +Y KC + AR VF + + IVSWT++++AYAQN EAL++F + + +
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK- 220
Query: 227 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 286
P+ L SV++A L L G+ +H + + +G + + L MYAKCG + + +
Sbjct: 221 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 280
Query: 287 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 346
F+++ +P++I + +MI AK G+ R+++ +F EM+ K ++P+ I++ + AC+ G
Sbjct: 281 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG-- 340
Query: 347 NEGLYYLTSMYEKYG---IMPETKHYTCVVDMLARVGELDKA---FDLAKSMDVAPDDKA 406
L SMYE G + + ++DM A+ G ++ A FD DV
Sbjct: 341 --SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV------ 400
Query: 407 LLWGALLSASRCHGR 414
++W A++ HGR
Sbjct: 401 VVWSAMIVGYGLHGR 404
HSP 3 Score: 105.1 bits (261), Expect = 2.7e-21
Identity = 81/339 (23.89%), Postives = 161/339 (47.49%), Query Frame = 1
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+ +D +A+ I + + + L+ HA + + G + + + LI D+ AR
Sbjct: 18 IHSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 77
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ + I W ++I Y++N H +AL ++ L+ P+ + ++ AC+ L
Sbjct: 78 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLS 137
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNP--SVIPYTSM 301
L G+ +H LG D+ V + L+ +YAKC L + VF + P +++ +T++
Sbjct: 138 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 197
Query: 302 IVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYG 361
+ + A+ G ++L++F +M + +KP+ + LV VL+A + +G S+ K G
Sbjct: 198 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMG 257
Query: 362 IMPETKHYTCVVDMLARVGELDKA---FDLAKSMDVAPDDKALLWGALLSASRCHGRVDI 421
+ E + M A+ G++ A FD KS ++ +LW A++S +G
Sbjct: 258 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL------ILWNAMISGYAKNGYARE 317
Query: 422 AAEACQQLVNSNRQVAGAYVTLS-NVYASAGDMEKAHKL 455
A + +++N + + +T + + A G +E+A +
Sbjct: 318 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
BLAST of Csa6G197240 vs. TrEMBL
Match:
A0A067GIP2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039695mg PE=4 SV=1)
HSP 1 Score: 810.8 bits (2093), Expect = 1.1e-231
Identity = 397/602 (65.95%), Postives = 470/602 (78.07%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L RNL F L L+R+N+R T + + L+ C LIS S HS LK GFL+NT
Sbjct: 5 LTRNLIFTLAASSLTRQNKRSSCHTKAHFIQQLQECKHLISLASVHSEILKSGFLSNTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
+NHLINCYVR + A QLFDEM PNVVS+TSLMAGY++ GQP AL LF +ML + V
Sbjct: 65 LNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
PN+FTFAT IKACS+L++L G+ H H+E FG+ N+VVCSSL+DMYGKCNDV AR
Sbjct: 125 WPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVCSSLVDMYGKCNDVDGARR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ M C+N+VSWTS+I A+AQNA G EAL++FREF S + PN +MLASVI+ACASLG
Sbjct: 185 VFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RLVSGKV HG + GC+ ++VVAS LVDMYAKCGS++YSDKVFNRISNPSV+ YTSMIV
Sbjct: 245 RLVSGKVAHGVVVRSGCEFNDVVASALVDMYAKCGSVNYSDKVFNRISNPSVVTYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
AKYG GR SL LF EM+ +G+KPN +T VGVLHACSHSGL +EG+ +L SMY KYGI+
Sbjct: 305 GAAKYGLGRFSLDLFNEMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGII 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P+ KHYTCVVDML R G LD+A+ LAKS+ V PD LLWG LLSASR HGRVDIA EA
Sbjct: 365 PDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVEAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
QL+ SN+QVA AYVTLSN YA AG+ E H LR EMKRTG+HKEPGCSW+EI+D +Y F
Sbjct: 425 NQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG RG EVL LLREL++KMK+RGYV G+ GLVFVD+E+EA EE V LHSERLAL
Sbjct: 485 YAGN-ALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
FGLISIPKG+TIRIMKNLRMC DCH+ FKLIS+I+ER+FVVRD+NRFHHF+NG C+C
Sbjct: 545 AFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGD 604
Query: 602 FW 604
FW
Sbjct: 605 FW 605
BLAST of Csa6G197240 vs. TrEMBL
Match:
M5XKX1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021143mg PE=4 SV=1)
HSP 1 Score: 809.3 bits (2089), Expect = 3.2e-231
Identity = 399/602 (66.28%), Postives = 479/602 (79.57%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L +NL ALT LSR+N+ + +L + LR+C D S+ S HS +K G L +T
Sbjct: 5 LNQNLISALTASNLSRQNQL----SPSHLIQQLRSCKDSDSAKSLHSNGIKSGSLYDTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
NHLINCYVR + I A QLFDEMP PNVVSWTSLMAGYVD GQP AL++FG+M V
Sbjct: 65 TNHLINCYVRLQRIDLASQLFDEMPEPNVVSWTSLMAGYVDTGQPRMALWVFGKMPECSV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+PN+FTFAT I ACSIL++LR G+ HA VE+ G+ N+VVCSSL+DMYGKCNDV A+
Sbjct: 125 LPNEFTFATVINACSILAHLRTGKKIHALVELLGFQSNLVVCSSLVDMYGKCNDVDHAQR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ M C+N+VSWTS+IAAYAQNA GDEAL++FREF L E PN +MLASV++ACASLG
Sbjct: 185 VFDLMGCRNVVSWTSIIAAYAQNAQGDEALQLFREFNRLMLERPNHFMLASVVNACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RLVSGKV HGA I G DS+ V+AS L+DMYAK G ++YSDKVF RI NPSVIPYTSMIV
Sbjct: 245 RLVSGKVAHGAVIRGGYDSNAVIASALLDMYAKSGCVEYSDKVFRRIRNPSVIPYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
+ AKYG GR SLQLF+EM+ + +KPN +T VGVLHACSHSGL +EGL L SM+EK+GI
Sbjct: 305 AAAKYGLGRMSLQLFQEMIDRRIKPNDVTFVGVLHACSHSGLVDEGLQQLESMHEKHGIT 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P KHYTC+VDML R G L++A++LAKS+ + +ALLWG LLSASR HGRVDIA EA
Sbjct: 365 PTAKHYTCIVDMLGRTGRLNEAYELAKSIQAEANQEALLWGTLLSASRLHGRVDIAVEAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
++L++SN+QV GAYVTLSN YA G+ E AH LR+EM+RTGV KEPGCSW+E+KDSSY+F
Sbjct: 425 RRLIDSNQQVVGAYVTLSNAYALNGEWETAHDLRLEMRRTGVQKEPGCSWVEMKDSSYVF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG+++SC RG EV+ LLREL+ KMK RGYV G +GLVFVD+EEEA+E V LHSERLAL
Sbjct: 485 YAGDVSSCTRGSEVVTLLRELEGKMKQRGYVGGSRGLVFVDVEEEAKEGIVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
GF L+SIPKG+TIRIMKNLRMC DCHEAFKLIS+I+ERE VVRD+NRFHHFK+G CTC
Sbjct: 545 GFALLSIPKGVTIRIMKNLRMCRDCHEAFKLISDIVERECVVRDVNRFHHFKSGSCTCRD 602
Query: 602 FW 604
FW
Sbjct: 605 FW 602
BLAST of Csa6G197240 vs. TrEMBL
Match:
A0A067KYD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01996 PE=4 SV=1)
HSP 1 Score: 804.3 bits (2076), Expect = 1.0e-229
Identity = 395/596 (66.28%), Postives = 474/596 (79.53%), Query Frame = 1
Query: 8 FALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLIN 67
F+LT +LSR+ +R T N LRNCN ++ISTHS K G L +T +NHLIN
Sbjct: 11 FSLTTLHLSRQKKRSNYHTKANFIEKLRNCNHFNAAISTHSSLFKSGLLFDTFTINHLIN 70
Query: 68 CYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFT 127
CY+R A QLFDEMP PNVVSWTS++AGYVD GQP AL+L+ +M S VVPNDFT
Sbjct: 71 CYIRLHKTGHAQQLFDEMPEPNVVSWTSIIAGYVDTGQPKFALWLYTKMPESSVVPNDFT 130
Query: 128 FATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMS 187
F+T I ACSIL++L G+ H H+E+ G+ GN+VVCSSLIDMYGKCND AR VF+ M
Sbjct: 131 FSTVINACSILADLETGKKIHTHIELLGFQGNLVVCSSLIDMYGKCNDPDGARRVFDLME 190
Query: 188 CKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSGK 247
+N+VSWTS++AAYAQNA G EAL+VFREF+SL E PN +MLASVI+ACASLG+LVSGK
Sbjct: 191 YRNVVSWTSLVAAYAQNARGHEALQVFREFSSLMRESPNHFMLASVINACASLGKLVSGK 250
Query: 248 VMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYG 307
V HGA I G + ++VVAS LVDMYAKCG YSDKVF RI++PSVIPYTSMIV AKYG
Sbjct: 251 VAHGAVIRSGHEINDVVASALVDMYAKCGCFSYSDKVFRRITDPSVIPYTSMIVGAAKYG 310
Query: 308 FGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHY 367
G+ SLQ F+EM+ + +KPN IT VGVLHACSHSGL +EGL +L SMYEK+GIMP+TKHY
Sbjct: 311 LGKLSLQFFDEMIERRIKPNDITFVGVLHACSHSGLVDEGLKHLNSMYEKHGIMPDTKHY 370
Query: 368 TCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNS 427
TCVVDML+R+G LD+A LAKS+ V PD+ ALLWG LLSASR GRVDIA EA + L+ S
Sbjct: 371 TCVVDMLSRIGCLDEAHRLAKSIRVNPDEGALLWGTLLSASRLQGRVDIAVEASKWLIES 430
Query: 428 NRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEIT 487
N+QVAGAYV LSN YA AG+ E A+ LR EM+R GV+KEPGCSW+E KDS+Y+FYAG++
Sbjct: 431 NQQVAGAYVILSNTYALAGEWENANSLRSEMRRVGVYKEPGCSWVENKDSTYVFYAGDL- 490
Query: 488 SCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLIS 547
S RG EVL LL++L+++MK++GYV G GLVFVD+E+EA+EE V LHSERLAL FGLIS
Sbjct: 491 SFERGSEVLSLLKDLERRMKEKGYVGGSMGLVFVDVEQEAKEEIVGLHSERLALAFGLIS 550
Query: 548 IPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNGFW 604
+PKG+TIR+MKNLRMC DCHEAFKLISEI+ERE VVRD+NRFHHFKNG C+C FW
Sbjct: 551 MPKGITIRVMKNLRMCKDCHEAFKLISEIVEREIVVRDVNRFHHFKNGSCSCMDFW 605
BLAST of Csa6G197240 vs. TrEMBL
Match:
V4S2A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004576mg PE=4 SV=1)
HSP 1 Score: 794.7 bits (2051), Expect = 8.1e-227
Identity = 390/602 (64.78%), Postives = 466/602 (77.41%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L RNL F L L+R+N+R T + + L+ C IS S HS LK GFL+NT
Sbjct: 5 LTRNLIFTLAASSLTRQNKRSSCHTKAHFIQQLQECKHFISLASVHSEILKSGFLSNTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
+NHLINCYVR + A QLFDEM PNVVS+TSLMAGY++ GQP AL LF +ML + V
Sbjct: 65 LNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQPQIALLLFQKMLGNLV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
PN+FTFAT IKACS+L++L G+ H H+E FG+ N+VV SSL+DMYGKCNDV AR
Sbjct: 125 WPNEFTFATVIKACSMLADLITGKQIHTHIETFGFQYNLVVGSSLVDMYGKCNDVDGARR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ M C+N+VSWTS+I A+AQNA G EAL++FREF S + PN +MLASVI+ACASLG
Sbjct: 185 VFDLMGCRNVVSWTSIIVAHAQNAQGHEALEMFREFNYQSRDRPNQHMLASVINACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RLVSGKV HG + G + ++VVAS LVDMYAKCG ++YS+KVFNRISNPSV+ YTSMIV
Sbjct: 245 RLVSGKVAHGVVVRSGSEFNDVVASALVDMYAKCGCVNYSEKVFNRISNPSVVTYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
AKYG GR SL LF +M+ +G+KPN +T VGVLHACSHSGL +EG+ +L SMY KYGI+
Sbjct: 305 GAAKYGLGRFSLDLFNKMISRGIKPNDVTFVGVLHACSHSGLVDEGIQHLDSMYRKYGII 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P+ KHYTCVVDML R G LD+A+ LAKS+ V PD LLWG LLSASR HGRVDIA +A
Sbjct: 365 PDAKHYTCVVDMLGRTGRLDEAYKLAKSIQVDPDGGPLLWGTLLSASRLHGRVDIAVDAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
QL+ SN+QVA AYVTLSN YA AG+ E H LR EMKRTG+HKEPGCSW+EI+D +Y F
Sbjct: 425 NQLIESNQQVANAYVTLSNTYALAGEWENVHSLRSEMKRTGIHKEPGCSWVEIRDQTYAF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG RG EVL LLREL++KMK+RGYV G+ GLVFVD+E+EA EE V LHSERLAL
Sbjct: 485 YAGN-ALFERGSEVLSLLRELERKMKERGYVGGKTGLVFVDVEDEAREEIVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
FGLISIPKG+TIRIMKNLRMC DCH+ FKLIS+I+ER+FVVRD+NRFHHF+NG C+C
Sbjct: 545 AFGLISIPKGITIRIMKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGD 604
Query: 602 FW 604
FW
Sbjct: 605 FW 605
BLAST of Csa6G197240 vs. TrEMBL
Match:
B9N512_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0008s22620g PE=4 SV=1)
HSP 1 Score: 788.1 bits (2034), Expect = 7.6e-225
Identity = 383/575 (66.61%), Postives = 464/575 (80.70%), Query Frame = 1
Query: 29 NLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNP 88
++ + L+NC D I +ISTH+ K G LN+T+ NHL+N Y+RFR I AH LFDEM P
Sbjct: 11 HIIQQLKNCKDFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEP 70
Query: 89 NVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFH 148
NVVSWTSLM+GYV+ G+P +AL+L+ +M S V PN FT AT I +CSIL++L+ G+M H
Sbjct: 71 NVVSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVH 130
Query: 149 AHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGD 208
AHV+I G GN+VVCSSL+DMYGKCNDV AR VF+SMSC+N+VSWT+MIA YAQN G
Sbjct: 131 AHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGY 190
Query: 209 EALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVL 268
EAL+VFREF+S E PN +MLASVI+ACASLGRLVSGKV HGA I G + ++VVAS L
Sbjct: 191 EALEVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASAL 250
Query: 269 VDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNH 328
VDMYAKCGS YS+KVF RI NPSVIPYTSMIV AKYG G+ SL LFEEM + + PN
Sbjct: 251 VDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPND 310
Query: 329 ITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAK 388
+T VG+LHACSHSGL +EGL L SM+EK+G+MP+ +HYTCVVDML+RVG LD+A+ LAK
Sbjct: 311 VTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAK 370
Query: 389 SMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDM 448
S+ V P++ ALLWG LLS+SR HGRVD+A EA + L+ N+QVAGAYVTLSN Y AG+
Sbjct: 371 SIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTLAGEW 430
Query: 449 EKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKD 508
E AH LR EM+ GVHKEPGCSWIEIKDS Y+FYAG++ SC RGDEV+ LLREL+++M +
Sbjct: 431 ENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDL-SCERGDEVISLLRELERRMME 490
Query: 509 RGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHE 568
RG V G GLVFVD+E+E +E+ V LHSERLAL FGLISIPKG+TIR+MKNLR+CSDCHE
Sbjct: 491 RGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRVMKNLRICSDCHE 550
Query: 569 AFKLISEIMEREFVVRDINRFHHFKNGCCTCNGFW 604
AFKLIS+I+ER+FVVRD+NRFHHFK+G CTC FW
Sbjct: 551 AFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
BLAST of Csa6G197240 vs. TAIR10
Match:
AT4G15720.1 (AT4G15720.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 643.7 bits (1659), Expect = 1.2e-184
Identity = 326/567 (57.50%), Postives = 422/567 (74.43%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
H++ LKLGF ++T VNHL+ YV+ + I TA +LFDEM PNVVSWTS+++GY D G+P
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 107 STALFLFGEMLRS-PVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSS 166
AL +F +M PV PN++TFA+ KACS L+ R G+ HA +EI G NIVV SS
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 167 LIDMYGKCNDVVKARGVFNSMSC--KNIVSWTSMIAAYAQNAHGDEALKVFREFTS-LSS 226
L+DMYGKCNDV AR VF+SM +N+VSWTSMI AYAQNA G EA+++FR F + L+S
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 227 EHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSD 286
+ N +MLASVISAC+SLGRL GKV HG G +S+ VVA+ L+DMYAKCGSL ++
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 287 KVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSG 346
K+F RI SVI YTSMI++ AK+G G +++LF+EMV + PN++TL+GVLHACSHSG
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSG 351
Query: 347 LPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWG 406
L NEGL YL+ M EKYG++P+++HYTCVVDML R G +D+A++LAK+++V + ALLWG
Sbjct: 352 LVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWG 411
Query: 407 ALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTG 466
ALLSA R HGRV+I +EA ++L+ SN+QV AY+ LSN YA +G E + LR+EMKR+G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Query: 467 VHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGL---- 526
KE CSWIE KDS Y+F+AG++ SC E+ L++L+++MK+RG+ RG +
Sbjct: 472 NVKERACSWIENKDSVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTS 531
Query: 527 --VFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEI 586
VFVD++EEA++E V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEI
Sbjct: 532 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 591
Query: 587 MEREFVVRDINRFHHFKNGCCTCNGFW 604
+ERE VVRD+NRFH FKNG CTC +W
Sbjct: 592 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
HSP 2 Score: 115.5 bits (288), Expect = 1.1e-25
Identity = 83/268 (30.97%), Postives = 128/268 (47.76%), Query Frame = 1
Query: 20 ERPFLQTIENLSRHLRNCNDLISSISTHSIALKL---GFLNNTVNVNHLINCYVRFRSIA 79
+RP + + C+ L S +I +L G N V + L++ Y + +
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 80 TAHQLFDEMPN--PNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVP--NDFTFATAI 139
TA ++FD M NVVSWTS++ Y N + A+ LF + N F A+ I
Sbjct: 184 TARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVI 243
Query: 140 KACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIV 199
ACS L L+ G++ H V GY N VV +SL+DMY KC + A +F + C +++
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVI 303
Query: 200 SWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSG-KVMHG 259
S+TSMI A A++ G+ A+K+F E + +PN L V+ AC+ G + G + +
Sbjct: 304 SYTSMIMAKAKHGLGEAAVKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 363
Query: 260 AAISLGCDSSEVVASVLVDMYAKCGSLD 280
A G + +VDM + G +D
Sbjct: 364 MAEKYGVVPDSRHYTCVVDMLGRFGRVD 390
HSP 3 Score: 111.3 bits (277), Expect = 2.1e-24
Identity = 95/353 (26.91%), Postives = 155/353 (43.91%), Query Frame = 1
Query: 99 GYVDNGQ--PSTALFLFGEMLRSPVVPNDF----TFATAIKACSILSNLRHGEMFHAHVE 158
G++ N P+T+LF+ P NDF T A + S +N + H
Sbjct: 4 GFIQNVHLAPATSLFV-------PQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTL 63
Query: 159 IFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALK 218
G+ + + L+ Y K ++ AR +F+ M N+VSWTS+I+ Y AL
Sbjct: 64 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 123
Query: 219 VFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMY 278
+F++ PN Y ASV AC++L GK +H G + VV+S LVDMY
Sbjct: 124 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 183
Query: 279 AKCGSLDYSDKVFNRI--SNPSVIPYTSMIVSTAKYGFGRKSLQLFEEM--VRKGLKPNH 338
KC ++ + +VF+ + +V+ +TSMI + A+ G ++++LF + N
Sbjct: 184 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ 243
Query: 339 ITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAK 398
L V+ ACS G G + + G T T ++DM A+ G L A +
Sbjct: 244 FMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 303
Query: 399 SMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNV 442
+ + + +++ A HG + A + ++V ++ YVTL V
Sbjct: 304 RIRC---HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG--RINPNYVTLLGV 343
BLAST of Csa6G197240 vs. TAIR10
Match:
AT4G37170.1 (AT4G37170.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 406.4 bits (1043), Expect = 3.1e-113
Identity = 213/542 (39.30%), Postives = 318/542 (58.67%), Query Frame = 1
Query: 63 NHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVV 122
N ++N Y + A +LFDEM + SWT+++ GYV QP AL L+ M R P
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 -PNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 182
PN FT + A+ A + + +R G+ H H+ G + V+ SSL+DMYGKC + +AR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 242
+F+ + K++VSWTSMI Y +++ E +F E S E PN Y A V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 302
GK +HG +G D +S LVDMY KCG+++ + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 362
A+ G ++L+ F+ +++ G KP+H+T V VL AC+H+GL +GL + S+ EK+ +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 422
+ HYTC+VD+LAR G ++ + M + P LW ++L +G +D+A EA
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 482
Q+L + YVT++N+YA+AG E+ K+R M+ GV K PG SW EIK ++F
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 542
A + TS P ++++ LREL +KMK+ GYV LV D+E+E +EE + HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQKEENLVYHSEKLAV 634
Query: 543 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 602
F ++S +G I++ KNLR C DCH A K IS I +R+ VRD RFH F+NG C+C
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691
Query: 603 FW 604
+W
Sbjct: 695 YW 691
HSP 2 Score: 395.2 bits (1014), Expect = 7.2e-110
Identity = 220/616 (35.71%), Postives = 331/616 (53.73%), Query Frame = 1
Query: 20 ERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAH 79
++P T NL + L H GF+ V N L+ Y + S+ A
Sbjct: 81 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDAR 140
Query: 80 QLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVV----------------- 139
++FDEMPN ++ SW ++ GY + G A LF EM
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 140 ---------------PNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLI 199
PN FT + A+ A + + +R G+ H H+ G + V+ SSL+
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 200 DMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNP 259
DMYGKC + +AR +F+ + K++VSWTSMI Y +++ E +F E S E PN
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNE 320
Query: 260 YMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNR 319
Y A V++ACA L GK +HG +G D +S LVDMY KCG+++ + V +
Sbjct: 321 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 380
Query: 320 ISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEG 379
P ++ +TS+I A+ G ++L+ F+ +++ G KP+H+T V VL AC+H+GL +G
Sbjct: 381 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 440
Query: 380 LYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSA 439
L + S+ EK+ + + HYTC+VD+LAR G ++ + M + P LW ++L
Sbjct: 441 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGG 500
Query: 440 SRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEP 499
+G +D+A EA Q+L + YVT++N+YA+AG E+ K+R M+ GV K P
Sbjct: 501 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 560
Query: 500 GCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEA 559
G SW EIK ++F A + TS P ++++ LREL +KMK+ GYV LV D+E+E
Sbjct: 561 GSSWTEIKRKRHVFIAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQ 620
Query: 560 EEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDIN 604
+EE + HSE+LA+ F ++S +G I++ KNLR C DCH A K IS I +R+ VRD
Sbjct: 621 KEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDST 680
BLAST of Csa6G197240 vs. TAIR10
Match:
AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-110
Identity = 219/594 (36.87%), Postives = 335/594 (56.40%), Query Frame = 1
Query: 15 LSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRS 74
LS+E+ P QT E L + + L ++ H L G + LI Y S
Sbjct: 69 LSQESS-PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128
Query: 75 IATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKA 134
+ A ++FD+ + W +L G L L+ +M R V + FT+ +KA
Sbjct: 129 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188
Query: 135 C----SILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKN 194
C +++L G+ HAH+ GY ++ + ++L+DMY + V A VF M +N
Sbjct: 189 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 248
Query: 195 IVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH-PNPYMLASVISACASLGRLVSGKVM 254
+VSW++MIA YA+N EAL+ FRE + + PN + SV+ ACASL L GK++
Sbjct: 249 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 308
Query: 255 HGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFG 314
HG + G DS V S LV MY +CG L+ +VF+R+ + V+ + S+I S +G+G
Sbjct: 309 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 368
Query: 315 RKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTC 374
+K++Q+FEEM+ G P +T V VL ACSH GL EG +M+ +GI P+ +HY C
Sbjct: 369 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 428
Query: 375 VVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNR 434
+VD+L R LD+A + + M P K +WG+LL + R HG V++A A ++L
Sbjct: 429 MVDLLGRANRLDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEP 488
Query: 435 QVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSC 494
+ AG YV L+++YA A ++ +++ ++ G+ K PG W+E++ Y F + + +
Sbjct: 489 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN- 548
Query: 495 PRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIP 554
P +++ L +L + MK++GY+ KG+++ ++E E +E V HSE+LAL FGLI+
Sbjct: 549 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTS 608
Query: 555 KGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNGFW 604
KG IRI KNLR+C DCH K IS+ ME+E +VRD+NRFH FKNG C+C +W
Sbjct: 609 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Csa6G197240 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 396.0 bits (1016), Expect = 4.2e-110
Identity = 211/559 (37.75%), Postives = 323/559 (57.78%), Query Frame = 1
Query: 45 STHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNG 104
+ HSI +K F N L++ Y + + +A +F EM + +VVS+TS++AGY G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 105 QPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCS 164
A+ LF EM + P+ +T + C+ L G+ H ++ G +I V +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 165 SLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 224
+L+DMY KC + +A VF+ M K+I+SW ++I Y++N + +EAL +F
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 225 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 284
P+ +A V+ ACASL G+ +HG + G S VA+ LVDMYAKCG+L + +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 285 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 344
F+ I++ ++ +T MI +GFG++++ LF +M + G++ + I+ V +L+ACSHSGL
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 345 NEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGAL 404
+EG + M + I P +HY C+VDMLAR G+L KA+ ++M + PD A +WGAL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD--ATIWGAL 676
Query: 405 LSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVH 464
L R H V +A + +++ + G YV ++N+YA A E+ +LR + + G+
Sbjct: 677 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 736
Query: 465 KEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIE 524
K PGCSWIEIK IF AG+ +S P + + LR++ +M + GY K +D E
Sbjct: 737 KNPGCSWIEIKGRVNIFVAGD-SSNPETENIEAFLRKVRARMIEEGYSPLTK-YALIDAE 796
Query: 525 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 584
E +EE + HSE+LA+ G+IS G IR+ KNLR+C DCHE K +S++ RE V+R
Sbjct: 797 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 856
Query: 585 DINRFHHFKNGCCTCNGFW 604
D NRFH FK+G C+C GFW
Sbjct: 857 DSNRFHQFKDGHCSCRGFW 871
HSP 2 Score: 157.9 bits (398), Expect = 1.9e-38
Identity = 110/388 (28.35%), Postives = 184/388 (47.42%), Query Frame = 1
Query: 26 TIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEM 85
T +S+ + + H LK GF N L+ Y++ + + +A ++FDEM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 86 PNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGE 145
+V+SW S++ GYV NG L +F +ML S + + T + C+ + G
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 146 MFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNA 205
H+ + C++L+DMY KC D+ A+ VF MS +++VS+TSMIA YA+
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 206 HGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVA 265
EA+K+F E P+ Y + +V++ CA L GK +H V+
Sbjct: 377 LAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 436
Query: 266 SVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMV-RKGL 325
+ L+DMYAKCGS+ ++ VF+ + +I + ++I +K + ++L LF ++ K
Sbjct: 437 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 496
Query: 326 KPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAF 385
P+ T+ VL AC+ ++G + + G + +VDM A+ G L A
Sbjct: 497 SPDERTVACVLPACASLSAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 556
Query: 386 DLAKSMDVAPDDKALLWGALLSASRCHG 413
L D+A D + W +++ HG
Sbjct: 557 MLFD--DIASKD-LVSWTVMIAGYGMHG 579
HSP 3 Score: 150.2 bits (378), Expect = 4.1e-36
Identity = 90/294 (30.61%), Postives = 150/294 (51.02%), Query Frame = 1
Query: 54 GFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLF 113
GF+ ++ + L Y + A ++FDE+ + W LM +G S ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 114 GEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKC 173
+M+ S V + +TF+ K+ S L ++ GE H + G+G V +SL+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 174 NDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASV 233
V AR VF+ M+ ++++SW S+I Y N ++ L VF + +S + + SV
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSV 303
Query: 234 ISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSV 293
+ CA + G+ +H + + + L+DMY+KCG LD + VF +S+ SV
Sbjct: 304 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 363
Query: 294 IPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEG 348
+ YTSMI A+ G ++++LFEEM +G+ P+ T+ VL+ C+ L +EG
Sbjct: 364 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
BLAST of Csa6G197240 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 395.2 bits (1014), Expect = 7.2e-110
Identity = 206/559 (36.85%), Postives = 329/559 (58.86%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPN--VVSWTSLMAGYVDNG 106
H+ +LGF + N LI Y + R + +A +F+ +P P +VSWT++++ Y NG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 107 QPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCS 166
+P AL +F +M + V P+ + + A + L +L+ G HA V G +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 167 SLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 226
SL MY KC V A+ +F+ M N++ W +MI+ YA+N + EA+ +F E +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVR 321
Query: 227 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 286
P+ + S ISACA +G L + M+ ++S L+DM+AKCGS++ + V
Sbjct: 322 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 381
Query: 287 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 346
F+R + V+ +++MIV +G R+++ L+ M R G+ PN +T +G+L AC+HSG+
Sbjct: 382 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 441
Query: 347 NEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGAL 406
EG ++ M + + I P+ +HY CV+D+L R G LD+A+++ K M V P +WGAL
Sbjct: 442 REGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG--VTVWGAL 501
Query: 407 LSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVH 466
LSA + H V++ A QQL + + G YV LSN+YA+A ++ ++RV MK G++
Sbjct: 502 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 561
Query: 467 KEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIE 526
K+ GCSW+E++ F G+ S PR +E+ + ++ ++K+ G+V + + D+
Sbjct: 562 KDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEWIESRLKEGGFVANKDASLH-DLN 621
Query: 527 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 586
+E EE + HSER+A+ +GLIS P+G +RI KNLR C +CH A KLIS++++RE VVR
Sbjct: 622 DEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVR 681
Query: 587 DINRFHHFKNGCCTCNGFW 604
D NRFHHFK+G C+C +W
Sbjct: 682 DTNRFHHFKDGVCSCGDYW 694
HSP 2 Score: 196.1 bits (497), Expect = 6.4e-50
Identity = 117/375 (31.20%), Postives = 195/375 (52.00%), Query Frame = 1
Query: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
H+ L LG + + LI+ F I A Q+FD++P P + W +++ GY N
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSL 166
AL ++ M + V P+ FTF +KACS LS+L+ G HA V G+ ++ V + L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 167 IDMYGKCNDVVKARGVFNSMSC--KNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 226
I +Y KC + AR VF + + IVSWT++++AYAQN EAL++F + + +
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK- 220
Query: 227 PNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKV 286
P+ L SV++A L L G+ +H + + +G + + L MYAKCG + + +
Sbjct: 221 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 280
Query: 287 FNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLP 346
F+++ +P++I + +MI AK G+ R+++ +F EM+ K ++P+ I++ + AC+ G
Sbjct: 281 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG-- 340
Query: 347 NEGLYYLTSMYEKYG---IMPETKHYTCVVDMLARVGELDKA---FDLAKSMDVAPDDKA 406
L SMYE G + + ++DM A+ G ++ A FD DV
Sbjct: 341 --SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV------ 400
Query: 407 LLWGALLSASRCHGR 414
++W A++ HGR
Sbjct: 401 VVWSAMIVGYGLHGR 404
HSP 3 Score: 105.1 bits (261), Expect = 1.5e-22
Identity = 81/339 (23.89%), Postives = 161/339 (47.49%), Query Frame = 1
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+ +D +A+ I + + + L+ HA + + G + + + LI D+ AR
Sbjct: 18 IHSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 77
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ + I W ++I Y++N H +AL ++ L+ P+ + ++ AC+ L
Sbjct: 78 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLS 137
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNP--SVIPYTSM 301
L G+ +H LG D+ V + L+ +YAKC L + VF + P +++ +T++
Sbjct: 138 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 197
Query: 302 IVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYG 361
+ + A+ G ++L++F +M + +KP+ + LV VL+A + +G S+ K G
Sbjct: 198 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMG 257
Query: 362 IMPETKHYTCVVDMLARVGELDKA---FDLAKSMDVAPDDKALLWGALLSASRCHGRVDI 421
+ E + M A+ G++ A FD KS ++ +LW A++S +G
Sbjct: 258 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL------ILWNAMISGYAKNGYARE 317
Query: 422 AAEACQQLVNSNRQVAGAYVTLS-NVYASAGDMEKAHKL 455
A + +++N + + +T + + A G +E+A +
Sbjct: 318 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
BLAST of Csa6G197240 vs. NCBI nr
Match:
gi|449450898|ref|XP_004143199.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus])
HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 1
Query: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV
Sbjct: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
Query: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP
Sbjct: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
Query: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600
LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600
Query: 601 GFW 604
GFW
Sbjct: 601 GFW 603
BLAST of Csa6G197240 vs. NCBI nr
Match:
gi|659117198|ref|XP_008458473.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis melo])
HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 582/603 (96.52%), Postives = 590/603 (97.84%), Query Frame = 1
Query: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
MLKRNL+FALTRPYLSRENERPFLQTIENLS HLRNCNDLISSI THSIALKLGFLNNTV
Sbjct: 1 MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
Query: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
VNHLINCYVRFRSIATAH+LFDEMPNPNVVSWTSLMAGYVDNGQPSTAL LFGEMLRSP
Sbjct: 61 TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR+GE FHAHVEIFGYG NIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSE PNPYMLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
Query: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
GRLVSGKV+HGAAI LGCDSSEVVASVLVDMYAKCGSLDYSD VFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHITL+GVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
MPETKHYTCVVDMLAR GELDKAFD+AKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
CQQLVNSNRQVAGAYVTLSN YASAGDMEKAHKLRVEMK TGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600
LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF++GCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
Query: 601 GFW 604
GFW
Sbjct: 601 GFW 603
BLAST of Csa6G197240 vs. NCBI nr
Match:
gi|657996695|ref|XP_008390714.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Malus domestica])
HSP 1 Score: 830.5 bits (2144), Expect = 1.9e-237
Identity = 404/602 (67.11%), Postives = 485/602 (80.56%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L +NL FA T LSR+N+ +E LR+C D S+ S HS A+K G+L +T
Sbjct: 5 LNQNLIFAFTASNLSRQNKPSNFHLVEQ----LRHCKDSGSAESLHSAAIKSGYLYDTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
NH+INCYVR R I A QLFDEMP PNVVSWTSLMAGYVD GQP AL+LFG+M V
Sbjct: 65 TNHVINCYVRLRRIDLAGQLFDEMPEPNVVSWTSLMAGYVDTGQPGMALWLFGKMPECSV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+PN+FTFAT I ACSIL++LR G+ H VE+ G+ N+VVCSSL+DMYGKCNDV A+
Sbjct: 125 IPNEFTFATVINACSILAHLRTGKKVHGLVEVLGFQSNLVVCSSLVDMYGKCNDVDNAQR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+SMSC+N+VSWTS+I AYAQNA G EAL++FREF L SE PN +MLASV++ACASLG
Sbjct: 185 VFDSMSCRNVVSWTSIICAYAQNAQGQEALQLFREFNRLMSERPNHFMLASVVNACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RLVSGKV HG+ I DS++V+AS LVDMYAKCG ++YSDKVF RI NP+VIPYTSMIV
Sbjct: 245 RLVSGKVAHGSVIRGSHDSNDVIASALVDMYAKCGCVEYSDKVFRRIRNPTVIPYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
+ AKYG GR SLQLF+EM+ +G+KPN++T VGVLHACSHSGL +EGL +L SM+EK+GI+
Sbjct: 305 AAAKYGLGRMSLQLFQEMIDRGIKPNNVTFVGVLHACSHSGLVDEGLQHLESMFEKHGIL 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P KH+TCVVDML R G L++A++LAKS+ P+ +ALLWG LLSASR HGRVDIA EA
Sbjct: 365 PNAKHHTCVVDMLGRTGRLNEAYELAKSIQAEPNQEALLWGTLLSASRLHGRVDIAVEAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
++L++SN+QVAGAYVTLSN YA G+ E +H LR EM+RTGV KEPGCSWIE+KDS+Y+F
Sbjct: 425 RRLIDSNQQVAGAYVTLSNAYALNGEWENSHDLRSEMRRTGVQKEPGCSWIEVKDSTYVF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG+++SC RG EV+ LLR+L+ KMK RGYV G GLVFVD+EEEA+EE V LHSERLAL
Sbjct: 485 YAGDVSSCARGSEVVALLRDLEGKMKQRGYVGGSLGLVFVDVEEEAKEEIVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
GF LISIPKG+ IRIMKNLRMC DCHEAFKLISEI+EREFVVRD+NRFHHFK+G CTC
Sbjct: 545 GFALISIPKGVIIRIMKNLRMCRDCHEAFKLISEIVEREFVVRDVNRFHHFKSGSCTCTD 602
Query: 602 FW 604
FW
Sbjct: 605 FW 602
BLAST of Csa6G197240 vs. NCBI nr
Match:
gi|694322400|ref|XP_009352331.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Pyrus x bretschneideri])
HSP 1 Score: 828.6 bits (2139), Expect = 7.3e-237
Identity = 402/602 (66.78%), Postives = 484/602 (80.40%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L +NL FALT LSR+N+ +E LR C D S+ S HS A+K G+L +T
Sbjct: 5 LNQNLIFALTASNLSRQNKPSNFHLVEQ----LRRCKDSGSAESLHSAAIKSGYLYDTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
NH+INCYVR R I A QLFDEMP PNVVSWTSLMAGYVD GQP AL+LFG+M V
Sbjct: 65 TNHVINCYVRLRRINFASQLFDEMPEPNVVSWTSLMAGYVDTGQPGMALWLFGKMPECSV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+PN+FTFAT I ACSIL++LR G+ H VE+ G+ N+VVCSSL+DMYGKCNDV A+
Sbjct: 125 IPNEFTFATVINACSILAHLRTGKEVHGLVEVLGFQSNLVVCSSLVDMYGKCNDVDNAQR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+SMSC+N+VSWTS++ AYAQNA G EAL++FREF L+SE PN +MLASV++ACASLG
Sbjct: 185 VFDSMSCRNVVSWTSIVCAYAQNAQGQEALQLFREFIHLTSERPNHFMLASVVNACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RL SGKV HG+ I DS++V+AS LVDMYAKCG ++YSDKVF RI NP+VIPYTSMIV
Sbjct: 245 RLASGKVAHGSVIRGSHDSNDVIASALVDMYAKCGCVEYSDKVFRRIWNPTVIPYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
+ AKYG GR SLQLF+EM+ +G+KPN +T VGVLHACSHSGL +EGL +L SM+EK+GI+
Sbjct: 305 AAAKYGLGRMSLQLFQEMIDRGIKPNDVTFVGVLHACSHSGLVDEGLQHLESMFEKHGIL 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P KH+TCVVDML R G L++A++LAKS+ P+ +ALLWG LLSASR HGRVDIA EA
Sbjct: 365 PNAKHHTCVVDMLGRTGRLNEAYELAKSIQAEPNQEALLWGTLLSASRLHGRVDIAVEAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
++L++SN+QVAGAYVTLSN YA G+ E +H LR EM+RTGV KEPGCSW+E+KDS+Y+F
Sbjct: 425 RRLIDSNQQVAGAYVTLSNAYALNGEWENSHDLRSEMRRTGVQKEPGCSWVEVKDSTYVF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG+++SC RG EV+ LLR+L+ KMK RGYV G GLVFVD+EEEA+EE V LHSERLAL
Sbjct: 485 YAGDVSSCARGSEVVALLRDLEGKMKQRGYVGGSLGLVFVDVEEEAKEETVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
GF LISIPKG+ IRIMKNLRMC DCHEAFKLISEI+EREFVVRD+NRFHHFK+G CTC
Sbjct: 545 GFALISIPKGVIIRIMKNLRMCRDCHEAFKLISEIVEREFVVRDVNRFHHFKSGSCTCTD 602
Query: 602 FW 604
FW
Sbjct: 605 FW 602
BLAST of Csa6G197240 vs. NCBI nr
Match:
gi|645233099|ref|XP_008223180.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Prunus mume])
HSP 1 Score: 812.4 bits (2097), Expect = 5.4e-232
Identity = 399/602 (66.28%), Postives = 476/602 (79.07%), Query Frame = 1
Query: 2 LKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTVN 61
L +NL ALT LSR+N+ + +L + LR+C D S+ S HS +K G L +T
Sbjct: 5 LNQNLISALTASNLSRQNQL----SPSHLIQQLRSCKDSDSAKSLHSNGIKSGSLYDTFT 64
Query: 62 VNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPV 121
NHLINCYVR I A QLFDEMP PNVVSWTSLM GYVD GQP AL+LFG+M V
Sbjct: 65 TNHLINCYVRLHRIDLASQLFDEMPEPNVVSWTSLMVGYVDTGQPRMALWLFGKMPECSV 124
Query: 122 VPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARG 181
+PN+FTFAT I ACSIL+ LR G+ HA VE+ G+ N+VVCSSL+DMYGKCNDV A+
Sbjct: 125 LPNEFTFATVINACSILAQLRTGKKIHALVELLGFQSNLVVCSSLVDMYGKCNDVDHAQR 184
Query: 182 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLG 241
VF+ M C+N+VSWTS+IAAYAQNA GDEAL++FREF L E PN +MLASV++ACASLG
Sbjct: 185 VFDLMGCRNVVSWTSIIAAYAQNAQGDEALQLFREFNRLMLERPNHFMLASVVNACASLG 244
Query: 242 RLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIV 301
RLVSGKV HGA I G DS+ V+AS L+DMYAKCG ++YSDKVF RI NPSVIPYTSMIV
Sbjct: 245 RLVSGKVAHGAVIRGGYDSNAVIASALLDMYAKCGCVEYSDKVFRRIQNPSVIPYTSMIV 304
Query: 302 STAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIM 361
+ AKYG GR SLQLF+EM+ + +KPN +T VGVLHACSHSGL +EGL L SM+EK+GI
Sbjct: 305 AAAKYGLGRMSLQLFQEMIDRRIKPNDVTFVGVLHACSHSGLVDEGLQQLESMHEKHGIT 364
Query: 362 PETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 421
P KHYTC+VDML R G L++A++LAKS+ + +ALLWG LLSASR HGRVDIA EA
Sbjct: 365 PTAKHYTCIVDMLGRTGRLNEAYELAKSIQAEANQEALLWGTLLSASRLHGRVDIAVEAS 424
Query: 422 QQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIF 481
++L++SN+QV GAYVTLSN Y G+ E AH LR EM+RTGV KEPGCSW+E+KDSSY+F
Sbjct: 425 RRLIDSNQQVVGAYVTLSNAYTLNGEWETAHDLRSEMRRTGVQKEPGCSWVELKDSSYVF 484
Query: 482 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 541
YAG+++SC +G EV+ LLREL+ KMK RGYV G +GLVFVD+EEEA+E V LHSERLAL
Sbjct: 485 YAGDVSSCAQGSEVVTLLRELEGKMKQRGYVGGSRGLVFVDVEEEAKEAIVGLHSERLAL 544
Query: 542 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNG 601
GF L+SIPKG+TIRIMKNLRMC DCHEAFKLIS+I+EREFVVRD+NRFHHFK+G CTC
Sbjct: 545 GFALVSIPKGVTIRIMKNLRMCRDCHEAFKLISDIVEREFVVRDVNRFHHFKSGSCTCRD 602
Query: 602 FW 604
FW
Sbjct: 605 FW 602
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP313_ARATH | 2.1e-183 | 57.50 | Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN... | [more] |
| PP353_ARATH | 5.6e-112 | 39.30 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN... | [more] |
| PP265_ARATH | 3.4e-109 | 36.87 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
| PP320_ARATH | 7.5e-109 | 37.75 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| PP224_ARATH | 1.3e-108 | 36.85 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A067GIP2_CITSI | 1.1e-231 | 65.95 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039695mg PE=4 SV=1 | [more] |
| M5XKX1_PRUPE | 3.2e-231 | 66.28 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021143mg PE=4 SV=1 | [more] |
| A0A067KYD1_JATCU | 1.0e-229 | 66.28 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01996 PE=4 SV=1 | [more] |
| V4S2A7_9ROSI | 8.1e-227 | 64.78 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004576mg PE=4 SV=1 | [more] |
| B9N512_POPTR | 7.6e-225 | 66.61 | Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G15720.1 | 1.2e-184 | 57.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G37170.1 | 3.1e-113 | 39.30 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G46790.1 | 1.9e-110 | 36.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 4.2e-110 | 37.75 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G12770.1 | 7.2e-110 | 36.85 | mitochondrial editing factor 22 | [more] |
