Csa6G157090.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G157090.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Reticulon-like protein B18; contains IPR003388 (Reticulon)
Location	Chr6 : 11025036 .. 11027269 (+)
Sequence length	1281

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCAAATTCAAAACCACGACTTGAACTTAAACATTTTCAGAAATCCGATTCTGTACTCTAAGATCTTCCATTAAACCAATCTCCTCCATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAGTATATCTAAGATTTCTCTATTTGGTGTTCTTGATTGATTTGGTTTCTATCTGTTCTGATTTGATTTGTATGTGTTTATTAGAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGGTCTGCGTCTTAAACTCGAATAAATCGTTAACCATTGTACATTTCTGCGAATGTTTGATCATCTATTAACAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAGTTTCTAATGAATCTTTAATCACCTCAAAATCTGTTAAGAGAGTTCCTAATGTTTATAAGATAGATGGTCATTCCTCCCATTATTAATTGGGTTTGATAAAATCCAATTGATTCTTGTTATAAGGTAAAATTTGAAATTGTAGGAACAATGATGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAACCATAAAACTCAACATCTATGATCATTGAACAATTTCAATTAACTAATCATATAAACTTCAGTGGTTGGATGTTTAATGGATTTAAGTATTTCTGGGGTTTTTCAGGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTTGTTGATTTATGATCGCTACTTTAATCTTCATTCACTTTCAGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGGTAAATAGGAATTCTAGGAAACACCCACTTAAATATAGCTACTTCTGCATTTTGTATGTAAAATGTGATGCTGAAAAAGAAGAATGATGATGGTGGTGGTATTTTACAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGGTAACAATCATGTTAGATGATCTTAGTTTCTTCAATCTCCATTGTTCTAGCTTAATAAAGGATGATTATTAAGCTCTGTCAGGTTTTGTTTGTTACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAGCTGTGATTTGGCTTTAGAGTTTTTTTTACTGCCAACACTGAAGTGTATAATAAACAAATGGGCTGTTTAGAGCTTTTTTACCTCTTAAATTTAATTGATTGATTTAAAGCTCAAACATCTTTTGGCCAGAAAA

mRNA sequence

ATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAG

Coding sequence (CDS)

ATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAG

Protein sequence

MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQVVAEPHC*

Homology

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BLAST of Csa6G157090.1 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 9.4e-98
Identity = 215/432 (49.77%), Postives = 281/432 (65.05%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLG 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV       N+S+FSA+S LGL+ L 
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGV-------NFSVFSAVSNLGLVLLC 240

Query: 241 LAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVA 300
            +F+SN++CQR N      F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV 
Sbjct: 241 GSFLSNTLCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVT 300

Query: 301 PFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSH 360
           PFL+LGAEYG+LITL RL A GFF SF++PKLY+CY  QI+ KV+ VK  + EAW  CSH
Sbjct: 301 PFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSH 360

Query: 361 KKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQ-EDEKQALVV 419
           KK++ GSA TAFWN +S++TRIF  FI+LVI RY RQ +  +  E+E V+ E E++ L  
Sbjct: 361 KKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQ 409

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BLAST of Csa6G157090.1 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 4.1e-93
Identity = 200/426 (46.95%), Postives = 273/426 (64.08%), Query Frame = 1


Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIF 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF      ++   N+S+F
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCF------AAKGFNFSVF 245

Query: 244 SAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIREL 303
           SAIS LGLLFLG++F+SN++ QR         KL EDD+ R+ + +LP  N AI K  EL
Sbjct: 246 SAISYLGLLFLGVSFLSNTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSEL 305

Query: 304 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 363
           F GE  MTLKVAPF+++GAEYGYLITL RLCA GFF SF++PKLY+CY  Q+N KV+  +
Sbjct: 306 FSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQ 365

Query: 364 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 402
           +   EAW  C+HKK V GSA TAFWN +SLKTR    FI++V++RY RQ +     + EE
Sbjct: 366 RRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEE 419

[Close]

BLAST of Csa6G157090.1 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 89/291 (30.58%), Postives = 158/291 (54.30%), Query Frame = 1


Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFK---- 253
           FG G+    S+ +   +       N+S  S ++ +GL++LGL FV  S+  R   +    
Sbjct: 246 FGFGTFLIISSSYANDL-------NFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERH 305

Query: 254 ----LKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRR 313
               ++E+D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  
Sbjct: 306 KVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWN 365

Query: 314 LCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSS 373
           L   GF  +F++PK++  Y    ++  +   +   +AWE+C+HKK V  +  T  WN SS
Sbjct: 366 LAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSS 425

Query: 374 LKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQ 416
           +  R++ AF++LV  RY +  ++ +  + ++ ++D ++     EA +E+EQ
Sbjct: 426 VTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEEE----EAEEEKEQ 465

[Close]

BLAST of Csa6G157090.1 vs. TrEMBL
Match: A0A0A0KBW7_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1)

HSP 1 Score: 842.8 bits (2176), Expect = 1.8e-241
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI
Sbjct: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300

Query: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360
           TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW
Sbjct: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360

Query: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420
           NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV
Sbjct: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420

Query: 421 VAEPHC 427
           VAEPHC
Sbjct: 421 VAEPHC 426

[Close]

BLAST of Csa6G157090.1 vs. TrEMBL
Match: A0A067JJE5_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 257/442 (58.14%), Postives = 316/442 (71.49%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAI-SSPRRKTPSPS------ 60
           MD TPPSH+S+P S+TKS+SRLA     VE ++ PH S+D I SS +R +P+PS      
Sbjct: 1   MDSTPPSHKSNPNSQTKSASRLARITYSVENEEPPHLSLDLIHSSAKRTSPTPSALSLKS 60

Query: 61  ------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCAS 120
                  QD+L LSPS   K+R+RL DR EM +E   EP  SRRRC+++   L  MGCAS
Sbjct: 61  STNSLSFQDLLLLSPSP-RKARTRLADRLEMAEEAAMEPTGSRRRCKSKAAHLSSMGCAS 120

Query: 121 PRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTP 180
           PR  RRSRRRSE+E +E++DL  L EE  K RKR+ SGRSKKEKLSLVP  S PSSS +P
Sbjct: 121 PRHSRRSRRRSEIEIKEDKDLVGLVEEIGKVRKRRHSGRSKKEKLSLVP--SVPSSSPSP 180

Query: 181 KLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSI 240
           K++  +  +LD+IG +I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       +
Sbjct: 181 KVEAGDESNLDRIGIIIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS-------M 240

Query: 241 FSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRE 300
            SAISQLGLL LG +F+SNSIC+R N      FKLKE+DI +L +L+LP AN AI K RE
Sbjct: 241 LSAISQLGLLLLGASFISNSICRRSNVEKRSNFKLKEEDILKLGRLILPPANLAISKTRE 300

Query: 301 LFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAV 360
           LF GE  MTLKV PFL+LGAEYG+L+TLRRLCA+G F  F++PKLY+CY  QIN KVD +
Sbjct: 301 LFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCALGLFIGFTIPKLYSCYSSQINQKVDYI 360

Query: 361 KQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIE 417
           K  + EAWEACSHKK+V GSA TAFWN SS+KTRIF AFI LVI+R  RQ ++  E E  
Sbjct: 361 KSRILEAWEACSHKKIVAGSAITAFWNMSSVKTRIFAAFIFLVILRCFRQHLL-PEQEKG 420

[Close]

BLAST of Csa6G157090.1 vs. TrEMBL
Match: U5FMF4_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 259/452 (57.30%), Postives = 318/452 (70.35%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNY 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFS      
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFS------ 240

Query: 241 SIFSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKI 300
            IFSAISQLGLLFLG++F+SNSICQR +      FKL E+DI R+ +L+LPAAN AI K 
Sbjct: 241 -IFSAISQLGLLFLGVSFLSNSICQRNSVEKLRKFKLTEEDILRVGRLILPAANLAILKT 300

Query: 301 RELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVD 360
           R+LF GE  MTLKV PFL+LGAEYG+L+TLRRLC IGFF SF++PKL+ CY  QIN KV+
Sbjct: 301 RDLFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCGIGFFISFTIPKLFACYSSQINQKVE 360

Query: 361 AVKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPE 420
            +K  M EAW AC HKK+V  SA TAFWN SS+KTRIFTAFI LVI+R CRQ ++ S+ E
Sbjct: 361 HLKCRMMEAWRACFHKKMVAASAVTAFWNLSSVKTRIFTAFISLVILRCCRQQLMPSQEE 420

Query: 421 --IEEVQEDEKQALVVVEAGKEEEQKQVQVVA 423
             ++  Q       V  EA  E+E KQ  V +
Sbjct: 421 GGLQPTQ-------VEGEAEGEQEPKQAGVAS 436

[Close]

BLAST of Csa6G157090.1 vs. TrEMBL
Match: B9RVU8_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_1173020 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 253/451 (56.10%), Postives = 320/451 (70.95%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAISSPR-RKTPS-PS----- 60
           MD TPPSHRS+P S+TKS+SRLA     ++ +++   S+D I SP  ++TPS PS     
Sbjct: 1   MDSTPPSHRSNPNSQTKSASRLARITSSIDNEESLRSSLDLILSPAPKRTPSTPSNLSLK 60

Query: 61  -------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCA 120
                    ++L LSPS   KSR+RL DR ++ +E   EP  SRRRC++R  QLG     
Sbjct: 61  SCTNSLPFHELLLLSPSPSRKSRTRLADRLDIAEEAAMEPTGSRRRCKSRTAQLG----- 120

Query: 121 SPRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTT 180
           SPR  RRSRRRSE+E REE+DL  L EE  KARKR+ SGRSKKEKLSLVP  S PSS+ +
Sbjct: 121 SPRISRRSRRRSEMEIREEKDLLGLVEEIGKARKRRHSGRSKKEKLSLVP--SLPSSNPS 180

Query: 181 PKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYS 240
           PK+ + + G+L++IG++I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       
Sbjct: 181 PKVGDCDGGNLNRIGRMIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS------- 240

Query: 241 IFSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIR 300
           IFSAISQLGLLFLG +F+SNSICQR N      FKLKE+DI +L +L+LP AN AI   R
Sbjct: 241 IFSAISQLGLLFLGASFISNSICQRNNVESRCNFKLKEEDILKLGRLILPPANLAISMAR 300

Query: 301 ELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDA 360
           ELF GE  MTLKV PFL++GAEYG+LIT+ RLCAIGFF  F++PKLY+CY  QIN KVD 
Sbjct: 301 ELFSGEPSMTLKVIPFLLVGAEYGHLITMWRLCAIGFFIGFTIPKLYSCYSSQINQKVDY 360

Query: 361 VKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPE- 420
            +  + +AWEACSHKK+V  SA TAFWN SS+KTRIF AFI LVI+R CRQ ++ ++ E 
Sbjct: 361 ARGRVLDAWEACSHKKIVAASAITAFWNMSSVKTRIFAAFIFLVILRCCRQHMIPNQEEG 420

Query: 421 -IEEVQEDEKQALVVVEAGKEEEQKQVQVVA 423
             EE ++ ++Q     E G++E+Q+ + VVA
Sbjct: 421 QAEEGEQGQQQQQQEAEEGEQEQQQALVVVA 437

[Close]

BLAST of Csa6G157090.1 vs. TrEMBL
Match: M5VGG3_PRUPE (Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa014722mg PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 252/447 (56.38%), Postives = 318/447 (71.14%), Query Frame = 1


Query: 4   TPPSHR---SDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPS-----------I 63
           TPP H    S+P SRTKS+SRLA ++ Q PH S+  I+S  ++TPSPS           +
Sbjct: 8   TPPYHHHSHSEPPSRTKSASRLA-QSGQIPHLSLGLITSSPKRTPSPSAHSIRSSDSLPL 67

Query: 64  QDILFLSPSTVGK-SRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPRSIRR 123
           +++L LSPS + K S++RL DR EM DE + E A  RRRC++RG Q+GL+GCASPR+ RR
Sbjct: 68  RELLLLSPSPLRKRSKARLTDRLEMADEPMVEAAGPRRRCKSRGAQMGLLGCASPRNTRR 127

Query: 124 SRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDEN 183
           SRRRSE E RE++D  L EE  K RKR    RSKKEKLSLV    +PS+S++        
Sbjct: 128 SRRRSETEIREDKDSGLVEEIAKPRKR----RSKKEKLSLVLSLPSPSASSS-------- 187

Query: 184 GSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQL 243
            +LD+IGQL+ DLIMW+DVA+SSLWFGLGSLFF S+CF +G+       N+SIFSAISQL
Sbjct: 188 -NLDRIGQLMNDLIMWRDVARSSLWFGLGSLFFLSSCFAKGI-------NFSIFSAISQL 247

Query: 244 GLLFLGLAFVSNSICQR------YNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAE 303
           GLLFLG +FVSNSI QR       +F LKE DI  + K++LPA N AI K R LF GE  
Sbjct: 248 GLLFLGASFVSNSISQRNGVEKKLDFMLKESDILGVAKIILPATNLAISKTRALFSGEPS 307

Query: 304 MTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEA 363
           MTLKVAPF +LGAEYG+LITL RLC + FF SF++PKLY+CY IQ+N KV+ +K W+ EA
Sbjct: 308 MTLKVAPFFLLGAEYGHLITLWRLCMLAFFISFTIPKLYSCYSIQMNQKVECLKWWVLEA 367

Query: 364 WEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSS-EPEIEEVQEDE 423
           W ACSHKK+V  SAATAFWN SS++TRIFTAF+ LVI+RYCRQ +V   E    EV++++
Sbjct: 368 WGACSHKKIVAASAATAFWNLSSVRTRIFTAFLSLVILRYCRQHMVQPLENGEAEVEQEQ 427

[Close]

BLAST of Csa6G157090.1 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 358.6 bits (919), Expect = 5.3e-99
Identity = 215/432 (49.77%), Postives = 281/432 (65.05%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLG 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV       N+S+FSA+S LGL+ L 
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGV-------NFSVFSAVSNLGLVLLC 240

Query: 241 LAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVA 300
            +F+SN++CQR N      F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV 
Sbjct: 241 GSFLSNTLCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVT 300

Query: 301 PFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSH 360
           PFL+LGAEYG+LITL RL A GFF SF++PKLY+CY  QI+ KV+ VK  + EAW  CSH
Sbjct: 301 PFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSH 360

Query: 361 KKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQ-EDEKQALVV 419
           KK++ GSA TAFWN +S++TRIF  FI+LVI RY RQ +  +  E+E V+ E E++ L  
Sbjct: 361 KKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQ 409

[Close]

BLAST of Csa6G157090.1 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-94
Identity = 200/426 (46.95%), Postives = 273/426 (64.08%), Query Frame = 1


Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIF 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF      ++   N+S+F
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCF------AAKGFNFSVF 245

Query: 244 SAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIREL 303
           SAIS LGLLFLG++F+SN++ QR         KL EDD+ R+ + +LP  N AI K  EL
Sbjct: 246 SAISYLGLLFLGVSFLSNTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSEL 305

Query: 304 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 363
           F GE  MTLKVAPF+++GAEYGYLITL RLCA GFF SF++PKLY+CY  Q+N KV+  +
Sbjct: 306 FSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQ 365

Query: 364 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 402
           +   EAW  C+HKK V GSA TAFWN +SLKTR    FI++V++RY RQ +     + EE
Sbjct: 366 RRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEE 419

[Close]

BLAST of Csa6G157090.1 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 155.6 bits (392), Expect = 6.8e-38
Identity = 89/291 (30.58%), Postives = 158/291 (54.30%), Query Frame = 1


Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFK---- 253
           FG G+    S+ +   +       N+S  S ++ +GL++LGL FV  S+  R   +    
Sbjct: 246 FGFGTFLIISSSYANDL-------NFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERH 305

Query: 254 ----LKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRR 313
               ++E+D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  
Sbjct: 306 KVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWN 365

Query: 314 LCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSS 373
           L   GF  +F++PK++  Y    ++  +   +   +AWE+C+HKK V  +  T  WN SS
Sbjct: 366 LAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSS 425

Query: 374 LKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQ 416
           +  R++ AF++LV  RY +  ++ +  + ++ ++D ++     EA +E+EQ
Sbjct: 426 VTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEEE----EAEEEKEQ 465

[Close]

BLAST of Csa6G157090.1 vs. NCBI nr
Match: gi|700191779|gb|KGN46983.1| (hypothetical protein Csa_6G157090 [Cucumis sativus])

HSP 1 Score: 842.8 bits (2176), Expect = 2.6e-241
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI
Sbjct: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300

Query: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360
           TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW
Sbjct: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360

Query: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420
           NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV
Sbjct: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420

Query: 421 VAEPHC 427
           VAEPHC
Sbjct: 421 VAEPHC 426

[Close]

BLAST of Csa6G157090.1 vs. NCBI nr
Match: gi|449463106|ref|XP_004149275.1| (PREDICTED: reticulon-like protein B17 [Cucumis sativus])

HSP 1 Score: 811.2 bits (2094), Expect = 8.5e-232
Identity = 418/433 (96.54%), Postives = 418/433 (96.54%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF       SIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF-------SIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360
           AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG
Sbjct: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360

Query: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420
           SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE
Sbjct: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420

Query: 421 EQKQVQVVAEPHC 427
           EQKQVQVVAEPHC
Sbjct: 421 EQKQVQVVAEPHC 426

[Close]

BLAST of Csa6G157090.1 vs. NCBI nr
Match: gi|659094813|ref|XP_008448255.1| (PREDICTED: reticulon-like protein B17 [Cucumis melo])

HSP 1 Score: 766.5 bits (1978), Expect = 2.4e-218
Identity = 395/433 (91.22%), Postives = 405/433 (93.53%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MD TPPSHRSDPRSR KSSSRLA EADQTPHFSVDAISSPRRKTPSPSIQD+LFLSPSTV
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAFEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE REER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSST PKLDNDENGS D+IGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSST-PKLDNDENGSFDRIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKD AKSSLWFGLGSLFFFSTCFTRGVSFS       IFS ISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDAAKSSLWFGLGSLFFFSTCFTRGVSFS-------IFSTISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIK LVKLVLPAANFAI KIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRNNVEKKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360
           AEYG+LITLRRLCAIGFFSSFSVPKLY+CYQIQINSKVDAVKQW+FEAWEACSHKKVVIG
Sbjct: 301 AEYGHLITLRRLCAIGFFSSFSVPKLYSCYQIQINSKVDAVKQWLFEAWEACSHKKVVIG 360

Query: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420
           SAAT FWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEI EVQEDE+QALVVVE+ +E+
Sbjct: 361 SAATVFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIVEVQEDERQALVVVESKEED 420

Query: 421 EQKQVQVVAEPHC 427
           +QKQVQVVAEPHC
Sbjct: 421 DQKQVQVVAEPHC 425

[Close]

BLAST of Csa6G157090.1 vs. NCBI nr
Match: gi|645245712|ref|XP_008229008.1| (PREDICTED: reticulon-like protein B17 [Prunus mume])

HSP 1 Score: 466.8 bits (1200), Expect = 3.9e-128
Identity = 263/448 (58.71%), Postives = 323/448 (72.10%), Query Frame = 1


Query: 4   TPPSH---RSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPS-----------I 63
           TPP H   RS+P SRTKSSSRLA ++ Q PH S+  I+S  ++TPSPS           +
Sbjct: 8   TPPYHHHSRSEPPSRTKSSSRLA-QSGQIPHLSLGLITSSPKRTPSPSAHSIRSSDSLPL 67

Query: 64  QDILFLSPSTVGK-SRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPRSIRR 123
           +++L LSPS + K S++RL DR EM DE V E A  RRRC++RG Q+GL+GCASPR+ RR
Sbjct: 68  RELLLLSPSPLRKRSKTRLTDRLEMADEPVVEAAGPRRRCKSRGAQMGLLGCASPRNTRR 127

Query: 124 SRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDEN 183
           SRRRSE E RE++D  L EE  K RKR    RSKKEKLSLV    +PS+S+   +D++  
Sbjct: 128 SRRRSETEIREDKDSGLVEEIAKPRKR----RSKKEKLSLVLSLPSPSASS---IDDEYR 187

Query: 184 GSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQL 243
           GSLD+IGQL+ DLIMW+DVA+SSLWFGLGSLFF S+CF +G+       N+SIFSAISQL
Sbjct: 188 GSLDRIGQLMNDLIMWRDVARSSLWFGLGSLFFLSSCFAKGI-------NFSIFSAISQL 247

Query: 244 GLLFLGLAFVSNSICQR------YNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAE 303
           GLLFLG +FVSNSIC+R       +F LKE DI  + K++LPA N AI K R LF GE  
Sbjct: 248 GLLFLGASFVSNSICERNGVEKKLDFMLKESDILGVAKMILPATNLAISKTRALFSGEPS 307

Query: 304 MTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEA 363
           MTLKVAPF +LGAEYG+LITL RLC + FF SF++PKLY+CY IQ+N KVD +K W+ EA
Sbjct: 308 MTLKVAPFFLLGAEYGHLITLWRLCMLAFFISFTIPKLYSCYSIQMNQKVDCLKWWVMEA 367

Query: 364 WEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSS-EPEIEEVQEDE 423
           W ACSHKK+V  SAATAFWN SS++TRIFTAFI LVI+RYCRQ +V   E    EV++++
Sbjct: 368 WGACSHKKIVAASAATAFWNLSSVRTRIFTAFISLVILRYCRQHMVQPLENGEAEVEQEQ 427

[Close]

BLAST of Csa6G157090.1 vs. NCBI nr
Match: gi|802752382|ref|XP_012088231.1| (PREDICTED: reticulon-like protein B17 isoform X2 [Jatropha curcas])

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126
Identity = 257/441 (58.28%), Postives = 316/441 (71.66%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAI-SSPRRKTPSPS------ 60
           MD TPPSH+S+P S+TKS+SRLA     VE ++ PH S+D I SS +R +P+PS      
Sbjct: 1   MDSTPPSHKSNPNSQTKSASRLARITYSVENEEPPHLSLDLIHSSAKRTSPTPSALSLKS 60

Query: 61  ------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCAS 120
                  QD+L LSPS   K+R+RL DR EM +E   EP  SRRRC+++   L  MGCAS
Sbjct: 61  STNSLSFQDLLLLSPSP-RKARTRLADRLEMAEEAAMEPTGSRRRCKSKAAHLSSMGCAS 120

Query: 121 PRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTP 180
           PR  RRSRRRSE+E +E++DL  L EE  K RKR+ SGRSKKEKLSLVP  S PSSS +P
Sbjct: 121 PRHSRRSRRRSEIEIKEDKDLVGLVEEIGKVRKRRHSGRSKKEKLSLVP--SVPSSSPSP 180

Query: 181 KLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSI 240
           K++  +  +LD+IG +I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       +
Sbjct: 181 KVEAGDESNLDRIGIIIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS-------M 240

Query: 241 FSAISQLGLLFLGLAFVSNSICQ-----RYNFKLKEDDIKRLVKLVLPAANFAIFKIREL 300
            SAISQLGLL LG +F+SNSIC+     R NFKLKE+DI +L +L+LP AN AI K REL
Sbjct: 241 LSAISQLGLLLLGASFISNSICRSNVEKRSNFKLKEEDILKLGRLILPPANLAISKTREL 300

Query: 301 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 360
           F GE  MTLKV PFL+LGAEYG+L+TLRRLCA+G F  F++PKLY+CY  QIN KVD +K
Sbjct: 301 FSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCALGLFIGFTIPKLYSCYSSQINQKVDYIK 360

Query: 361 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 417
             + EAWEACSHKK+V GSA TAFWN SS+KTRIF AFI LVI+R  RQ ++  E E  E
Sbjct: 361 SRILEAWEACSHKKIVAGSAITAFWNMSSVKTRIFAAFIFLVILRCFRQHLL-PEQEKGE 420

The following BLAST results are available for this feature:

BLAST of Csa6G157090.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLQ_ARATH	9.4e-98	49.77	Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1	[more]
RTNLR_ARATH	4.1e-93	46.95	Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2	[more]
RTNLS_ARATH	1.2e-36	30.58	Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2	[more]

BLAST of Csa6G157090.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW7_CUCSA	1.8e-241	100.00	Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1	[more]
A0A067JJE5_JATCU	1.1e-126	58.14	Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1	[more]
U5FMF4_POPTR	1.2e-123	57.30	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1	[more]
B9RVU8_RICCO	3.8e-122	56.10	Reticulon-like protein OS=Ricinus communis GN=RCOM_1173020 PE=4 SV=1	[more]
M5VGG3_PRUPE	3.8e-122	56.38	Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa014722mg PE=4 SV=1	[more]

BLAST of Csa6G157090.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20590.1	5.3e-99	49.77	Reticulon family protein	[more]
AT4G28430.1	2.3e-94	46.95	Reticulon family protein	[more]
AT5G58000.1	6.8e-38	30.58	Reticulon family protein	[more]

BLAST of Csa6G157090.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191779\|gb\|KGN46983.1\|	2.6e-241	100.00	hypothetical protein Csa_6G157090 [Cucumis sativus]	[more]
gi\|449463106\|ref\|XP_004149275.1\|	8.5e-232	96.54	PREDICTED: reticulon-like protein B17 [Cucumis sativus]	[more]
gi\|659094813\|ref\|XP_008448255.1\|	2.4e-218	91.22	PREDICTED: reticulon-like protein B17 [Cucumis melo]	[more]
gi\|645245712\|ref\|XP_008229008.1\|	3.9e-128	58.71	PREDICTED: reticulon-like protein B17 [Prunus mume]	[more]
gi\|802752382\|ref\|XP_012088231.1\|	1.3e-126	58.28	PREDICTED: reticulon-like protein B17 isoform X2 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G157090	Csa6G157090	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G157090.1	Csa6G157090.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G157090.1.utr5p1	Csa6G157090.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G157090.1.cds1	Csa6G157090.1.cds1	CDS
Csa6G157090.1.cds2	Csa6G157090.1.cds2	CDS
Csa6G157090.1.cds3	Csa6G157090.1.cds3	CDS
Csa6G157090.1.cds4	Csa6G157090.1.cds4	CDS
Csa6G157090.1.cds5	Csa6G157090.1.cds5	CDS
Csa6G157090.1.cds6	Csa6G157090.1.cds6	CDS
Csa6G157090.1.cds7	Csa6G157090.1.cds7	CDS
Csa6G157090.1.cds8	Csa6G157090.1.cds8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G157090.1.utr3p1	Csa6G157090.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 178..332 score: 1.4
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 177..335 score: 11
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 24..393 score: 1.4
None	No IPR available	PANTHER	PTHR10994:SF61	RETICULON-LIKE PROTEIN	coord: 24..393 score: 1.4