Csa6G104060 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGGTAAGGAAGTATCCTAGAACCACGATTTGATCGTTTTATTTTCAGCTTTAGACGTGACAGTTCCTGAGAAACCCAACTTAAACTTCGTTCCGTTTGCAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGTAACCTTCGTGAGCTGGCTAGTGACAGTCTTTCTCGATGTTCCCTTTTCGTATTTGTCGGAGCTTTTGATATTTGAATTTTAATCACAAGCATATTCTAGCAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGGCAAGTAAAGTAACTCAGGATGCCTTGATATTTCATTTTTTTAATTGTCGATTTCATTGCTTACTCATTTTTATGAAAATGTAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGGTAATATTTTACTGCCATTTGAAAACTTATCACCACAATTTAAACCAAATTCTTTACTCTCTCTTACAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRLLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYLLKAPRLTT*
BLAST of Csa6G104060 vs. TrEMBL
Match: A0A0A0KAM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104060 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 3.9e-103 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Csa6G104060 vs. TrEMBL
Match: E5GCN3_CUCME (Nucleolar RNA-associated protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.4e-86 Identity = 166/188 (88.30%), Postives = 170/188 (90.43%), Query Frame = 1
BLAST of Csa6G104060 vs. TrEMBL
Match: F6GWW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01830 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.9e-66 Identity = 125/184 (67.93%), Postives = 152/184 (82.61%), Query Frame = 1
BLAST of Csa6G104060 vs. TrEMBL
Match: M5VUX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000658mg PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63 Identity = 118/184 (64.13%), Postives = 150/184 (81.52%), Query Frame = 1
BLAST of Csa6G104060 vs. TrEMBL
Match: A0A067L2Y0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23753 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.0e-63 Identity = 124/185 (67.03%), Postives = 150/185 (81.08%), Query Frame = 1
BLAST of Csa6G104060 vs. TAIR10
Match: AT1G63810.1 (AT1G63810.1 Nrap protein (InterPro:IPR005554)) HSP 1 Score: 238.8 bits (608), Expect = 2.7e-63 Identity = 115/186 (61.83%), Postives = 145/186 (77.96%), Query Frame = 1
BLAST of Csa6G104060 vs. NCBI nr
Match: gi|700191294|gb|KGN46498.1| (hypothetical protein Csa_6G104060 [Cucumis sativus]) HSP 1 Score: 382.1 bits (980), Expect = 5.7e-103 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Csa6G104060 vs. NCBI nr
Match: gi|778722064|ref|XP_011658398.1| (PREDICTED: nucleolar protein 6 [Cucumis sativus]) HSP 1 Score: 377.1 bits (967), Expect = 1.8e-101 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 1
BLAST of Csa6G104060 vs. NCBI nr
Match: gi|659119654|ref|XP_008459772.1| (PREDICTED: nucleolar protein 6 isoform X2 [Cucumis melo]) HSP 1 Score: 365.2 bits (936), Expect = 7.1e-98 Identity = 180/188 (95.74%), Postives = 184/188 (97.87%), Query Frame = 1
BLAST of Csa6G104060 vs. NCBI nr
Match: gi|659119652|ref|XP_008459771.1| (PREDICTED: nucleolar protein 6 isoform X1 [Cucumis melo]) HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96 Identity = 180/189 (95.24%), Postives = 184/189 (97.35%), Query Frame = 1
BLAST of Csa6G104060 vs. NCBI nr
Match: gi|307136425|gb|ADN34232.1| (nucleolar RNA-associated protein [Cucumis melo subsp. melo]) HSP 1 Score: 325.5 bits (833), Expect = 6.3e-86 Identity = 166/188 (88.30%), Postives = 170/188 (90.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |