Csa6G020220 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTGGTCAAGCTTACAAACTTTGATCCTCTTCTTGACGCAACCTCCTTTTTTGCTCAAATTTCCTTCGACGATGCTGATGTGAAATTCACGCCTTCGAAATTCTTCATAATTTCCTCTCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCGCCACAATGGTTCACTAGTTTTTCCGTTGATCATGATCATAGTTCTAAGGTTTCCCTTGAATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATAATCCTTAGATTTGATACTCCTTCAAGTAAGTATATTTTTCTTTCAATCTTTTAATTTGCTTCTAAAATTGCATGATCAATTCTTGTCATTTCTTGATCAACATTTTAGACTACTATTATTTTTTTTATGTATATATTGTGAGAACAATGTTGTCACATAATAATTATCTTGATTGTTTTGTGGCAGATTTTTCTCTTAATCTTTTATTTTCTTTATAGTTTATGGTTTAATCTAATTAATTCGAAATATATGGTTTGTTTTTTAGGCGAAATCCAACCTTTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAGGAAAATATTTCATAGTTAAATCTAAGGCATTAAGACGAATTATTAAAGAGTTACCTATCTTCCAAAATGATTCAAGTAATTGA ATGTTCTTGGTCAAGCTTACAAACTTTGATCCTCTTCTTGACGCAACCTCCTTTTTTGCTCAAATTTCCTTCGACGATGCTGATGTGAAATTCACGCCTTCGAAATTCTTCATAATTTCCTCTCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCGCCACAATGGTTCACTAGTTTTTCCGTTGATCATGATCATAGTTCTAAGGTTTCCCTTGAATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATAATCCTTAGATTTGATACTCCTTCAAGCGAAATCCAACCTTTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAGGAAAATATTTCATAGTTAAATCTAAGGCATTAAGACGAATTATTAAAGAGTTACCTATCTTCCAAAATGATTCAAGTAATTGA ATGTTCTTGGTCAAGCTTACAAACTTTGATCCTCTTCTTGACGCAACCTCCTTTTTTGCTCAAATTTCCTTCGACGATGCTGATGTGAAATTCACGCCTTCGAAATTCTTCATAATTTCCTCTCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCGCCACAATGGTTCACTAGTTTTTCCGTTGATCATGATCATAGTTCTAAGGTTTCCCTTGAATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATAATCCTTAGATTTGATACTCCTTCAAGCGAAATCCAACCTTTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAGGAAAATATTTCATAGTTAAATCTAAGGCATTAAGACGAATTATTAAAGAGTTACCTATCTTCCAAAATGATTCAAGTAATTGA MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTSFSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSSEIQPLHHELALSPPQAEDNQIGQHELDEGKYFIVKSKALRRIIKELPIFQNDSSN*
BLAST of Csa6G020220 vs. TrEMBL
Match: A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020220 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.6e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of Csa6G020220 vs. TrEMBL
Match: A0A0A0K9W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002290 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38 Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 1
BLAST of Csa6G020220 vs. TrEMBL
Match: A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G155090 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.4e-17 Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 1
BLAST of Csa6G020220 vs. TrEMBL
Match: A0A0A0KB76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002310 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.3e-14 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of Csa6G020220 vs. NCBI nr
Match: gi|700190704|gb|KGN45908.1| (hypothetical protein Csa_6G020220 [Cucumis sativus]) HSP 1 Score: 329.3 bits (843), Expect = 3.8e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of Csa6G020220 vs. NCBI nr
Match: gi|659128729|ref|XP_008464344.1| (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]) HSP 1 Score: 305.8 bits (782), Expect = 4.5e-80 Identity = 151/162 (93.21%), Postives = 158/162 (97.53%), Query Frame = 1
BLAST of Csa6G020220 vs. NCBI nr
Match: gi|659117591|ref|XP_008458682.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50 Identity = 106/162 (65.43%), Postives = 133/162 (82.10%), Query Frame = 1
BLAST of Csa6G020220 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]) HSP 1 Score: 172.2 bits (435), Expect = 7.7e-40 Identity = 92/162 (56.79%), Postives = 122/162 (75.31%), Query Frame = 1
BLAST of Csa6G020220 vs. NCBI nr
Match: gi|700190430|gb|KGN45634.1| (hypothetical protein Csa_6G002290 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 1.5e-38 Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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