Csa5G591750 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCATCATCATCATCGTCGAATTTCAGCTGAAACTTGTTCTTTCTTGTATGAAAGTTTTTTTTTTTTTCCTGATCACAAAGACTGAGCGAAGGTTTAATTTCACTGCCACCCGCCATTGACTAAAGGACAAAGCTTCTATAAAAGCTAGAGAGAAATTAAAATAACAAAGAGGCTTTCTTTTTGGTTTTGGAAAGTGGGTTTGGGGCTTACCTTCTTCATTTTTCAGTCTCTTCTTTTGTTGGGGATTTTGGGTTGTAGGTTTTTAAGCTAGGGTTTCTTCTTTTGTCATACCCCATTTGAGAAAACCAGCTCCAGGCTTTGGGTTTCTCTCTTGTTTTCATCGGTTTCTTGCAGAGGAGGGAAGAGAATCTTTCAGATTATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGTGAGTTTTCTCTTTTAATTGTTTGTTAAGTACTTTTCTTAATTTTCCCCTTTTCAGTCGCGATGATCGACGTCTTGGTTTTGTTTCTGTCTGGAAGTGATTGTAAGGGGAGTCGTTTGGTTTTTCCCAAAATGGAAAGAAATAAATTGTTGTTTGTTGGGGTTTTGATGATTGTATTCTTAGATATCTGATTGTTTTTTGTTTGATTTTTTTTGGTCTTTTAGGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTCTGTTGGTTTTTTGTAGTTGTAGACAATTGATGATTATATTAAGTTTTTTTCCAGTATCGGTATGGTTGTGATATCTTATTGTTGATCATTGTATCAATTCAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGGTACTGACTTATTAAGTTTGTTAGCTAACGATTTGTCCTTTTTTAGTAGTTTTGTATATTCTGATATTGTGTTTTTCCTCGTGTTTTGAATTCCAGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGTAAAGACAAGTCTTATTAAGCATCATCGTCATTGTCTATGAAGCACTTTGTAGTGACCTCTGTGCTCAATTGCTATTTCTTCCTACATTACAGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAGTTCAGGCTTCAGAGTAAACTGTATAGAGGGAAAATCCCGACGCAAAATGTAAAGGTCAGAACATATCCTCTCTGCTTCATACAGAATCATTGATCACATCACATGCTTAGCTAGAACCAATAATGAATCAATGTAAGATGCCAATCATCTCTGCATCTCGGCTCGTGTATCTTATAAACTTGAAAGTGCCTTTTTCTAATGCACTGATTGTCAATAAAGATGAATTTGGTCTCTGGTGATTTGTATCATATCTTTTGTTGGCATGGATGG ATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAG ATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAG MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFIVYSEYLI*
BLAST of Csa5G591750 vs. TrEMBL
Match: A0A0A0KPZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591750 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 6.3e-149 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1
BLAST of Csa5G591750 vs. TrEMBL
Match: A0A061E745_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010694 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 1.8e-111 Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 1
BLAST of Csa5G591750 vs. TrEMBL
Match: D7TAJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02200 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-109 Identity = 185/253 (73.12%), Postives = 223/253 (88.14%), Query Frame = 1
BLAST of Csa5G591750 vs. TrEMBL
Match: A0A0B0MVX3_GOSAR (RING finger protein OS=Gossypium arboreum GN=F383_26827 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108 Identity = 190/253 (75.10%), Postives = 219/253 (86.56%), Query Frame = 1
BLAST of Csa5G591750 vs. TrEMBL
Match: W9RCI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027617 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-108 Identity = 189/253 (74.70%), Postives = 218/253 (86.17%), Query Frame = 1
BLAST of Csa5G591750 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein) HSP 1 Score: 348.6 bits (893), Expect = 3.3e-96 Identity = 168/255 (65.88%), Postives = 207/255 (81.18%), Query Frame = 1
BLAST of Csa5G591750 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein) HSP 1 Score: 323.9 bits (829), Expect = 8.6e-89 Identity = 152/244 (62.30%), Postives = 191/244 (78.28%), Query Frame = 1
BLAST of Csa5G591750 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein) HSP 1 Score: 223.0 bits (567), Expect = 2.1e-58 Identity = 111/241 (46.06%), Postives = 153/241 (63.49%), Query Frame = 1
BLAST of Csa5G591750 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein) HSP 1 Score: 211.1 bits (536), Expect = 8.1e-55 Identity = 104/241 (43.15%), Postives = 151/241 (62.66%), Query Frame = 1
BLAST of Csa5G591750 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein) HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51 Identity = 107/253 (42.29%), Postives = 149/253 (58.89%), Query Frame = 1
BLAST of Csa5G591750 vs. NCBI nr
Match: gi|449435023|ref|XP_004135295.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like [Cucumis sativus]) HSP 1 Score: 534.6 bits (1376), Expect = 9.1e-149 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1
BLAST of Csa5G591750 vs. NCBI nr
Match: gi|659090604|ref|XP_008446102.1| (PREDICTED: RING-H2 finger protein ATL47 [Cucumis melo]) HSP 1 Score: 525.8 bits (1353), Expect = 4.2e-146 Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 1
BLAST of Csa5G591750 vs. NCBI nr
Match: gi|590695631|ref|XP_007044944.1| (RING/U-box superfamily protein [Theobroma cacao]) HSP 1 Score: 410.2 bits (1053), Expect = 2.6e-111 Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 1
BLAST of Csa5G591750 vs. NCBI nr
Match: gi|1009153143|ref|XP_015894478.1| (PREDICTED: RING-H2 finger protein ATL47 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 409.5 bits (1051), Expect = 4.4e-111 Identity = 191/253 (75.49%), Postives = 221/253 (87.35%), Query Frame = 1
BLAST of Csa5G591750 vs. NCBI nr
Match: gi|225425930|ref|XP_002272699.1| (PREDICTED: uncharacterized protein LOC100240870 isoform X2 [Vitis vinifera]) HSP 1 Score: 403.3 bits (1035), Expect = 3.2e-109 Identity = 185/253 (73.12%), Postives = 223/253 (88.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |