Csa5G591750 (gene) Cucumber (Chinese Long) v2

NameCsa5G591750
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr5 : 21415691 .. 21417630 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTCTTCTTCATCATCATCATCGTCGAATTTCAGCTGAAACTTGTTCTTTCTTGTATGAAAGTTTTTTTTTTTTTCCTGATCACAAAGACTGAGCGAAGGTTTAATTTCACTGCCACCCGCCATTGACTAAAGGACAAAGCTTCTATAAAAGCTAGAGAGAAATTAAAATAACAAAGAGGCTTTCTTTTTGGTTTTGGAAAGTGGGTTTGGGGCTTACCTTCTTCATTTTTCAGTCTCTTCTTTTGTTGGGGATTTTGGGTTGTAGGTTTTTAAGCTAGGGTTTCTTCTTTTGTCATACCCCATTTGAGAAAACCAGCTCCAGGCTTTGGGTTTCTCTCTTGTTTTCATCGGTTTCTTGCAGAGGAGGGAAGAGAATCTTTCAGATTATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGTGAGTTTTCTCTTTTAATTGTTTGTTAAGTACTTTTCTTAATTTTCCCCTTTTCAGTCGCGATGATCGACGTCTTGGTTTTGTTTCTGTCTGGAAGTGATTGTAAGGGGAGTCGTTTGGTTTTTCCCAAAATGGAAAGAAATAAATTGTTGTTTGTTGGGGTTTTGATGATTGTATTCTTAGATATCTGATTGTTTTTTGTTTGATTTTTTTTGGTCTTTTAGGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTCTGTTGGTTTTTTGTAGTTGTAGACAATTGATGATTATATTAAGTTTTTTTCCAGTATCGGTATGGTTGTGATATCTTATTGTTGATCATTGTATCAATTCAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGGTACTGACTTATTAAGTTTGTTAGCTAACGATTTGTCCTTTTTTAGTAGTTTTGTATATTCTGATATTGTGTTTTTCCTCGTGTTTTGAATTCCAGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGTAAAGACAAGTCTTATTAAGCATCATCGTCATTGTCTATGAAGCACTTTGTAGTGACCTCTGTGCTCAATTGCTATTTCTTCCTACATTACAGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAGTTCAGGCTTCAGAGTAAACTGTATAGAGGGAAAATCCCGACGCAAAATGTAAAGGTCAGAACATATCCTCTCTGCTTCATACAGAATCATTGATCACATCACATGCTTAGCTAGAACCAATAATGAATCAATGTAAGATGCCAATCATCTCTGCATCTCGGCTCGTGTATCTTATAAACTTGAAAGTGCCTTTTTCTAATGCACTGATTGTCAATAAAGATGAATTTGGTCTCTGGTGATTTGTATCATATCTTTTGTTGGCATGGATGG

mRNA sequence

ATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAG

Coding sequence (CDS)

ATGTATTATCAGCTCGAGAAATTCTCTCATCAGGATTCTTTGGAAGTCTTGGAAGCGGATATTCAGTATGCTAATTCTTTGGCAGCTGCAATCCCCATGGCAAAAGGGGGTGTGTATCTTCAAATGAAGTTGGTTTATAATCACTTGGCTCCCATTGTTCTGTTTTTGCTACAATGGATGGATTGTTCTTGCACTTGCTTGCTTCCAAGATATTTGAACCTCTTCCACATACTTGTGTACAAGGTACATCCGGAAGGGAAACAAAAACAAAATATATCAAGGCATGGAAGGAAGGCAACTATTAGGGATTTCTATGCTATAATATTGCCTTCGCTTCAGCGAATCCATGGTAGCTTGGATAAGTTGGATGATTGCAAGGAAGAGCATCACTGGATTGAGATGTCTAGCAAGAAGAGAGTTGATAAAGATGGTAGACTCAAGAACATCGAAATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCCTGTACAAAGATGGTTTTGCCGAATTGTTGTCATTCAATGTGCATCAAATGCTACCGAAATTGGAACACAAGGTCAGAATCATGTCCATTTTGTCGTGGCAGCTTAAAGAGGGTCAACTCAGAGGACTTATGGGTACTCACTTGCAGCGATGATGTGGTTGATACCGAAACCGTTTCCAAGGAGGACATGTTGCAGTTTCATCGCTACATAAACAGCCTTCCAAAAGACTATCCAGATGCCCTCTTCATAGTATATTCCGAATATCTAATTTAG

Protein sequence

MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFIVYSEYLI*
BLAST of Csa5G591750 vs. TrEMBL
Match: A0A0A0KPZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591750 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 6.3e-149
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFIVYSEYLI 254
           PDALFIVYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

BLAST of Csa5G591750 vs. TrEMBL
Match: A0A061E745_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010694 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.8e-111
Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S+QDSL++LEADIQ+AN+LAAAIP AK G +LQMKLV N LAP+ LFLLQWM
Sbjct: 1   MYYQLSKSSYQDSLKILEADIQHANALAAAIPRAKSGAHLQMKLVCNRLAPLFLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSC CLLPRYLNLFHILVYKV+ +G+ K  IS HGRKAT+R+FY +ILPSLQR+HG L 
Sbjct: 61  DCSCICLLPRYLNLFHILVYKVYTDGRSK--ISTHGRKATVREFYGVILPSLQRLHGYLG 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           +LDD K+    +  S KKRV+ D R+ NI+++REDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 ELDDDKKGRFTMGSSGKKRVELDNRIGNIDLEREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNT+SESCPFCRGSLKRVNSEDLWVLTC+DDVVD +TVSKED+L+F+ YINSLPKDY
Sbjct: 181 YRNWNTKSESCPFCRGSLKRVNSEDLWVLTCNDDVVDDKTVSKEDLLRFYLYINSLPKDY 240

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 241 PDALFLVYYEYLI 251

BLAST of Csa5G591750 vs. TrEMBL
Match: D7TAJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02200 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-109
Identity = 185/253 (73.12%), Postives = 223/253 (88.14%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           ++YQL + S+QDS++VLEAD+Q+AN+LAAAIP  KGG  LQMKL YN LAP+ LFLLQWM
Sbjct: 4   VHYQLARCSYQDSIKVLEADVQHANALAAAIPRGKGGARLQMKLAYNPLAPVFLFLLQWM 63

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLP+YL+LFHIL+YKV+ +G+   NIS HGRKATIRDFYA+ILPSLQRIHG++ 
Sbjct: 64  DCSCTCLLPKYLDLFHILIYKVYTDGRP--NISAHGRKATIRDFYAVILPSLQRIHGNIM 123

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           +LD+ ++ H  IEM  KKR ++DGRL N+++KREDECGICLEPCTKMVLPNCCH+MCI C
Sbjct: 124 ELDNDEDGHPEIEMYGKKRTEEDGRLSNMDLKREDECGICLEPCTKMVLPNCCHAMCINC 183

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YR+WNTRSESCPFCRGS+KRVNSEDLWVLTC DDVV+TETV +ED+L+F+ YI+ LPK Y
Sbjct: 184 YRDWNTRSESCPFCRGSIKRVNSEDLWVLTCGDDVVNTETVCREDLLRFYLYIHHLPKHY 243

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 244 PDALFLVYYEYLI 254

BLAST of Csa5G591750 vs. TrEMBL
Match: A0A0B0MVX3_GOSAR (RING finger protein OS=Gossypium arboreum GN=F383_26827 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108
Identity = 190/253 (75.10%), Postives = 219/253 (86.56%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S+QD L++L+ADIQ+AN+LAAAIP AK G +LQMKLVYNHLAP+ LFLLQWM
Sbjct: 4   MYYQLSKSSYQDFLKILKADIQHANALAAAIPRAKSGAHLQMKLVYNHLAPLFLFLLQWM 63

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           D SC CLLPR+LNLFHILVYK+      + NISR GRKATIR+FY +ILPSLQR+HG+L 
Sbjct: 64  DSSCMCLLPRFLNLFHILVYKLKVYTDGRSNISRRGRKATIREFYGVILPSLQRLHGNLG 123

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           +LDD KE       S+KKRVD D RL NI+ +REDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 124 ELDDDKEAGG---SSAKKRVDLDNRLGNIDFEREDECGICLEPCTKMVLPNCCHAMCIKC 183

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNT+SESCPFCRGSLKRVNSEDLWVLTC+DDVVD +TVS+ED+L+F+ YINSLPKD+
Sbjct: 184 YRNWNTKSESCPFCRGSLKRVNSEDLWVLTCNDDVVDNKTVSQEDLLRFYLYINSLPKDF 243

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 244 PDALFLVYYEYLI 253

BLAST of Csa5G591750 vs. TrEMBL
Match: W9RCI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027617 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-108
Identity = 189/253 (74.70%), Postives = 218/253 (86.17%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL + S +DSL+VLEADIQ+AN+LAAAIP  KGG  LQMKLVYN+ API LFLLQW+
Sbjct: 4   MYYQLARSSCEDSLKVLEADIQHANALAAAIPRGKGGACLQMKLVYNNWAPIFLFLLQWL 63

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLN FHILVYKV+ +G+   NIS HGRKA+IRDFYA+ILP LQR+H  L 
Sbjct: 64  DCSCTCLLPRYLNFFHILVYKVYTDGRP--NISTHGRKASIRDFYAVILPYLQRLHTDLG 123

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           + DD K+ H  IE+S KKRV  +  L N++M+REDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 124 EFDDPKKGHLSIEISGKKRVKGESGLTNVDMEREDECGICLEPCTKMVLPNCCHAMCIKC 183

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWN +SESCPFCRGS+KRVNSEDLWVLTC+DDVVD ETVSKE++L+F+ YINSLPK Y
Sbjct: 184 YRNWNVKSESCPFCRGSMKRVNSEDLWVLTCNDDVVDNETVSKEELLRFYLYINSLPKVY 243

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 244 PDALFLVYYEYLI 254

BLAST of Csa5G591750 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-96
Identity = 168/255 (65.88%), Postives = 207/255 (81.18%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S++DSL++LEADI++AN LAA IPM K GV LQMKLV ++LAP  +FLLQWM
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           D SC  LLPRY + FHIL+YKV  +G+   N SR+GRKATIR+FY +ILPSL+R+H +  
Sbjct: 61  DFSC--LLPRYFDFFHILIYKVRADGRW--NRSRYGRKATIREFYGVILPSLERLHINFA 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGR--LKNIEMKREDECGICLEPCTKMVLPNCCHSMCI 180
            L D    +   +  +KK+ D +G   + +I+++REDECGICLEPCTKMVLPNCCH+MCI
Sbjct: 121 DLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCI 180

Query: 181 KCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPK 240
           KCYRNWNT+SESCPFCRGS+KRVNSEDLWVLTC +DVVD ETV+KED+L+F+ +INSLPK
Sbjct: 181 KCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPK 240

Query: 241 DYPDALFIVYSEYLI 254
           DYP+A F+VY+EYLI
Sbjct: 241 DYPEAAFLVYNEYLI 251

BLAST of Csa5G591750 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 323.9 bits (829), Expect = 8.6e-89
Identity = 152/244 (62.30%), Postives = 191/244 (78.28%), Query Frame = 1

Query: 9   SHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLL 68
           S+ +SL+VLEAD+Q+ANSLA AIPM K  V LQMKLV+++ A ++LFLL+W+D S +CL+
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 69  PRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEE 128
           PRYLNLFH+LVYKV  +G+ K  ++ HGRKATI +FY +ILPSLQ +H +LD+L+     
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPK--LTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG 134

Query: 129 HHWIEMSSK-KRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTR 188
                +S K  +  +  R  N  ++RE+ECGICLE CTKMVLPNCCHSMCIKCYRNWN +
Sbjct: 135 FDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLK 194

Query: 189 SESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFIV 248
           S+SCPFCRGS+KRVNSEDLWVL   +DVVDT T S+ED+ +F+ YINSLPKDYP+ALF+V
Sbjct: 195 SQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVV 254

Query: 249 YSEY 252
           Y EY
Sbjct: 255 YYEY 256

BLAST of Csa5G591750 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-58
Identity = 111/241 (46.06%), Postives = 153/241 (63.49%), Query Frame = 1

Query: 9   SHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSCTCLL 68
           S +DSL+ LEADIQ+AN+LA+  P    G Y+QM+L Y+  A + LFLLQW DC      
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDCKEE 128
              L L  IL+YK + +GK    +S H RK +IR+FY ++ PSL ++HG +  +++ K++
Sbjct: 64  AGALGLLRILIYKAYVDGKT--TMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 HHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNWNTRS 188
               +   KK     G++  I+++RE+ECGICLE   K+VLP C HSMCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDALFIVY 248
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE++ +   YI+ LP    D   + Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 249 S 250
           +
Sbjct: 244 A 238

BLAST of Csa5G591750 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 211.1 bits (536), Expect = 8.1e-55
Identity = 104/241 (43.15%), Postives = 151/241 (62.66%), Query Frame = 1

Query: 5   LEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWMDCSC 64
           + K S +DSL+ LEADIQ+AN+LA   P  K G  +QM+L Y+  A   LFL+QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK- 60

Query: 65  TCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDD 124
              L  +L L  +L+Y  + +GK   ++  + RKA+IR+F A+ILPSL ++   +  +DD
Sbjct: 61  ---LAGFLGLLRVLIYMTYADGKTTMSV--YERKASIREFQAVILPSLSQLQRGVTDIDD 120

Query: 125 CKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKCYRNW 184
            K++        + R   +  +  IE++RE+ECGIC+E  +K+VLPNC HS+CIKCYR+W
Sbjct: 121 SKQKE---VCKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDW 180

Query: 185 NTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDYPDAL 244
             RS+SCPFCR SLKRV+S DLW+    +D V+   +++E+  +   YI  LP   PD +
Sbjct: 181 RGRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQV 232

Query: 245 F 246
           +
Sbjct: 241 Y 232

BLAST of Csa5G591750 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 107/253 (42.29%), Postives = 149/253 (58.89%), Query Frame = 1

Query: 5   LEKFSHQDSLEVLEADIQYANSL------------AAAIPMAKGGVYLQMKLVYNHLAPI 64
           + K S +DSL+ LEADIQ+AN++            A   P  K G  +QM+L Y   A  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 65  VLFLLQWMDCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSL 124
           +LFL+QW DC     L   L L  +L+Y  + +GK   ++  + RK +I+DFYA+I PSL
Sbjct: 61  LLFLVQWTDCH----LAGTLGLLRVLIYMTYADGKTTMSV--YERKTSIKDFYAVIFPSL 120

Query: 125 QRIHGSLDKLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNC 184
            ++   +  LDD K++         K   +  +L  I+++RE+ECGIC+E    +VLPNC
Sbjct: 121 LQLERGITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNC 180

Query: 185 CHSMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRY 244
            HS+CIKCYR+W+ RSESCPFCR SLKRVNS DLW+L    D V+  T+ +E+  +   Y
Sbjct: 181 THSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVY 240

Query: 245 INSLPKDYPDALF 246
           I  LP   PD +F
Sbjct: 241 IEKLPLVVPDQVF 247

BLAST of Csa5G591750 vs. NCBI nr
Match: gi|449435023|ref|XP_004135295.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 9.1e-149
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFIVYSEYLI 254
           PDALFIVYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

BLAST of Csa5G591750 vs. NCBI nr
Match: gi|659090604|ref|XP_008446102.1| (PREDICTED: RING-H2 finger protein ATL47 [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 4.2e-146
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLNLFHILVYKV+PEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDDCKE HHWIEMSSKKR DKDGRLKNI+MKREDECGICLEPCTKMVLPNCCHSMCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFIVYSEYLI 254
           PDALFIVYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

BLAST of Csa5G591750 vs. NCBI nr
Match: gi|590695631|ref|XP_007044944.1| (RING/U-box superfamily protein [Theobroma cacao])

HSP 1 Score: 410.2 bits (1053), Expect = 2.6e-111
Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S+QDSL++LEADIQ+AN+LAAAIP AK G +LQMKLV N LAP+ LFLLQWM
Sbjct: 1   MYYQLSKSSYQDSLKILEADIQHANALAAAIPRAKSGAHLQMKLVCNRLAPLFLFLLQWM 60

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSC CLLPRYLNLFHILVYKV+ +G+ K  IS HGRKAT+R+FY +ILPSLQR+HG L 
Sbjct: 61  DCSCICLLPRYLNLFHILVYKVYTDGRSK--ISTHGRKATVREFYGVILPSLQRLHGYLG 120

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           +LDD K+    +  S KKRV+ D R+ NI+++REDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 ELDDDKKGRFTMGSSGKKRVELDNRIGNIDLEREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNT+SESCPFCRGSLKRVNSEDLWVLTC+DDVVD +TVSKED+L+F+ YINSLPKDY
Sbjct: 181 YRNWNTKSESCPFCRGSLKRVNSEDLWVLTCNDDVVDDKTVSKEDLLRFYLYINSLPKDY 240

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 241 PDALFLVYYEYLI 251

BLAST of Csa5G591750 vs. NCBI nr
Match: gi|1009153143|ref|XP_015894478.1| (PREDICTED: RING-H2 finger protein ATL47 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 409.5 bits (1051), Expect = 4.4e-111
Identity = 191/253 (75.49%), Postives = 221/253 (87.35%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           M YQL + S+QD L+VLEAD+QYANSLAAAIP  KGG  LQMKLVYN+LAP+ LFLLQW+
Sbjct: 4   MCYQLARSSYQDFLKVLEADVQYANSLAAAIPRGKGGARLQMKLVYNNLAPLFLFLLQWL 63

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           D SCTCLLPRYLN FHILVYKV+ +G+   NIS HGRKATI+DFYAIILPSL+R+HG  +
Sbjct: 64  DSSCTCLLPRYLNFFHILVYKVYTDGRP--NISTHGRKATIKDFYAIILPSLERLHGDFE 123

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           KLDD KE H  IE S KK +  +G L N++M+REDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 124 KLDDAKEGHSSIESSGKKMIMGEGGLANVDMEREDECGICLEPCTKMVLPNCCHAMCIKC 183

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YRNWNT+SESCPFCRG++KRVNSEDLWVLTC+DDVVDTETVS+ED+L+F+ YINSLPKD+
Sbjct: 184 YRNWNTKSESCPFCRGNIKRVNSEDLWVLTCNDDVVDTETVSEEDLLRFYLYINSLPKDH 243

Query: 241 PDALFIVYSEYLI 254
           PD+LF VY EYLI
Sbjct: 244 PDSLFFVYYEYLI 254

BLAST of Csa5G591750 vs. NCBI nr
Match: gi|225425930|ref|XP_002272699.1| (PREDICTED: uncharacterized protein LOC100240870 isoform X2 [Vitis vinifera])

HSP 1 Score: 403.3 bits (1035), Expect = 3.2e-109
Identity = 185/253 (73.12%), Postives = 223/253 (88.14%), Query Frame = 1

Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60
           ++YQL + S+QDS++VLEAD+Q+AN+LAAAIP  KGG  LQMKL YN LAP+ LFLLQWM
Sbjct: 4   VHYQLARCSYQDSIKVLEADVQHANALAAAIPRGKGGARLQMKLAYNPLAPVFLFLLQWM 63

Query: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLP+YL+LFHIL+YKV+ +G+   NIS HGRKATIRDFYA+ILPSLQRIHG++ 
Sbjct: 64  DCSCTCLLPKYLDLFHILIYKVYTDGRP--NISAHGRKATIRDFYAVILPSLQRIHGNIM 123

Query: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180
           +LD+ ++ H  IEM  KKR ++DGRL N+++KREDECGICLEPCTKMVLPNCCH+MCI C
Sbjct: 124 ELDNDEDGHPEIEMYGKKRTEEDGRLSNMDLKREDECGICLEPCTKMVLPNCCHAMCINC 183

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240
           YR+WNTRSESCPFCRGS+KRVNSEDLWVLTC DDVV+TETV +ED+L+F+ YI+ LPK Y
Sbjct: 184 YRDWNTRSESCPFCRGSIKRVNSEDLWVLTCGDDVVNTETVCREDLLRFYLYIHHLPKHY 243

Query: 241 PDALFIVYSEYLI 254
           PDALF+VY EYLI
Sbjct: 244 PDALFLVYYEYLI 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KPZ5_CUCSA6.3e-149100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591750 PE=4 SV=1[more]
A0A061E745_THECC1.8e-11175.89RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010694 PE=4 SV=1[more]
D7TAJ9_VITVI2.2e-10973.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02200 PE=4 SV=... [more]
A0A0B0MVX3_GOSAR1.1e-10875.10RING finger protein OS=Gossypium arboreum GN=F383_26827 PE=4 SV=1[more]
W9RCI9_9ROSA1.9e-10874.70Uncharacterized protein OS=Morus notabilis GN=L484_027617 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G24440.13.3e-9665.88 RING/U-box superfamily protein[more]
AT1G13195.18.6e-8962.30 RING/U-box superfamily protein[more]
AT5G01520.12.1e-5846.06 RING/U-box superfamily protein[more]
AT5G58787.18.1e-5543.15 RING/U-box superfamily protein[more]
AT3G47160.21.1e-5142.29 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449435023|ref|XP_004135295.1|9.1e-149100.00PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like [Cucumis sativus][more]
gi|659090604|ref|XP_008446102.1|4.2e-14698.42PREDICTED: RING-H2 finger protein ATL47 [Cucumis melo][more]
gi|590695631|ref|XP_007044944.1|2.6e-11175.89RING/U-box superfamily protein [Theobroma cacao][more]
gi|1009153143|ref|XP_015894478.1|4.4e-11175.49PREDICTED: RING-H2 finger protein ATL47 isoform X1 [Ziziphus jujuba][more]
gi|225425930|ref|XP_002272699.1|3.2e-10973.12PREDICTED: uncharacterized protein LOC100240870 isoform X2 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095096cucumber EST collection version 3.0transcribed_cluster
CU110107cucumber EST collection version 3.0transcribed_cluster
CU123534cucumber EST collection version 3.0transcribed_cluster
CU143655cucumber EST collection version 3.0transcribed_cluster
CU153658cucumber EST collection version 3.0transcribed_cluster
CU155473cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G591750.1Csa5G591750.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU123534CU123534transcribed_cluster
CU110107CU110107transcribed_cluster
CU143655CU143655transcribed_cluster
CU095096CU095096transcribed_cluster
CU153658CU153658transcribed_cluster
CU155473CU155473transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 155..195
score: 2.
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 157..194
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 157..195
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 148..202
score: 1.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 172..181
scor
NoneNo IPR availablePANTHERPTHR15315RING FINGER PROTEIN 41, 151coord: 36..253
score: 1.9E
NoneNo IPR availablePANTHERPTHR15315:SF35F21J9.10coord: 36..253
score: 1.9E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 149..200
score: 3.31

The following gene(s) are paralogous to this gene:

None