Csa4G624990.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGCTCTACGATTTAGAGAAGTGCGACTCTGGATGACACTGTTATGTAAATATTTGTGTGGATTCTCTATTGTTAAGGGAGTACTATCAGATGGAACTTCCATTGCTGTAAAACAACTATCTTCTAAATCAAGACAAGGGAATCGTGAGTTCATCACAGAAGTTGGGATGATTTCTGGATTACAACATCCAAACCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAAGCAATTGTTGCTTATTTATGAGTATTTACTGAACAATAATCTTGCTCGTGCACTTTTTAGTAAGTGTATCCATTTCTTTATATATATACTTCAATATATTATAAGGTTTTCGTTGGTTTTTTTTATCTAAATACGTTTCTGATTTTTAAGGCCCTGAGAAGCATTCTTTGAATTTGGATTGGCCAATAAGAATGAAGATATGTGTGGGAATAGCAAAGGGGTTGGCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCATAGAGATATAAAGGCTACTAATGTTCTACTTGATGAAAACTTGAATGCCAAGATCTCCGACTTTGGATTGGCTAAGCTTCATGAAGAGGAGAACACTCATATTAGCACAAGAATTGCAGGCACAGTGTATCTCTCTAGTTATCTCTATTTCTAACTTTCTTTTCAATGTCAAACCATTGGAACCTGCCTCTAAATGTCTAACTATTTTGTTCTTTTTTTATATGATTTACTTTTAGAGGTTATATGGCTCCTGAATACGCAATGAGGGGTCATTTAACTCACAAAGCTGATGTTTATAGTTTTGGAGTTGTGGCGTTAGAGATTGTTAGTGGAAAAAGTAATACGAATTATAGGCCAAAAGAAGAGTACGTTTATCTTCTTGATTGGGTAATAATTCATGGCTCAGAGTAGCACTCTTTACTATGTTTACAACATAAAGTTTCATTGATATGTCTAACTAAACATATATTTTTCTGCTTGCCTTTTGAAGGCTTGTGTTCTACAAGAGGAAGGGAACTTACTTGAACTTGTTGATCCAAATCTTGGCCCTCATTACTCAAAAGAGGAGGTCATGA ATGTTAGCTCTACGATTTAGAGAAGTGCGACTCTGGATGACACTGTTATGTAAATATTTGTGTGGATTCTCTATTGTTAAGGGAGTACTATCAGATGGAACTTCCATTGCTGTAAAACAACTATCTTCTAAATCAAGACAAGGGAATCGTGAGTTCATCACAGAAGTTGGGATGATTTCTGGATTACAACATCCAAACCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAAGCAATTGTTGCTTATTTATGAGTATTTACTGAACAATAATCTTGCTCGTGCACTTTTTAGCCCTGAGAAGCATTCTTTGAATTTGGATTGGCCAATAAGAATGAAGATATGTGTGGGAATAGCAAAGGGGTTGGCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCATAGAGATATAAAGGCTACTAATGTTCTACTTGATGAAAACTTGAATGCCAAGATCTCCGACTTTGGATTGGCTAAGCTTCATGAAGAGGAGAACACTCATATTAGCACAAGAATTGCAGGCACAGTGCTTGTGTTCTACAAGAGGAAGGGAACTTACTTGAACTTGTTGATCCAAATCTTGGCCCTCATTACTCAAAAGAGGAGGTCATGA ATGTTAGCTCTACGATTTAGAGAAGTGCGACTCTGGATGACACTGTTATGTAAATATTTGTGTGGATTCTCTATTGTTAAGGGAGTACTATCAGATGGAACTTCCATTGCTGTAAAACAACTATCTTCTAAATCAAGACAAGGGAATCGTGAGTTCATCACAGAAGTTGGGATGATTTCTGGATTACAACATCCAAACCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAAGCAATTGTTGCTTATTTATGAGTATTTACTGAACAATAATCTTGCTCGTGCACTTTTTAGCCCTGAGAAGCATTCTTTGAATTTGGATTGGCCAATAAGAATGAAGATATGTGTGGGAATAGCAAAGGGGTTGGCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCATAGAGATATAAAGGCTACTAATGTTCTACTTGATGAAAACTTGAATGCCAAGATCTCCGACTTTGGATTGGCTAAGCTTCATGAAGAGGAGAACACTCATATTAGCACAAGAATTGCAGGCACAGTGCTTGTGTTCTACAAGAGGAAGGGAACTTACTTGAACTTGTTGATCCAAATCTTGGCCCTCATTACTCAAAAGAGGAGGTCATGA MLALRFREVRLWMTLLCKYLCGFSIVKGVLSDGTSIAVKQLSSKSRQGNREFITEVGMISGLQHPNLVKLYGCCIEGKQLLLIYEYLLNNNLARALFSPEKHSLNLDWPIRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDENLNAKISDFGLAKLHEEENTHISTRIAGTVLVFYKRKGTYLNLLIQILALITQKRRS*
BLAST of Csa4G624990.1 vs. Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=2 SV=2) HSP 1 Score: 258.5 bits (659), Expect = 6.4e-68 Identity = 126/153 (82.35%), Postives = 138/153 (90.20%), Query Frame = 1
BLAST of Csa4G624990.1 vs. Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.4e-67 Identity = 125/153 (81.70%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of Csa4G624990.1 vs. Swiss-Prot
Match: Y3148_ARATH (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.9e-64 Identity = 120/156 (76.92%), Postives = 137/156 (87.82%), Query Frame = 1
BLAST of Csa4G624990.1 vs. Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62 Identity = 115/152 (75.66%), Postives = 131/152 (86.18%), Query Frame = 1
BLAST of Csa4G624990.1 vs. Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-59 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TrEMBL
Match: A0A0A0L204_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G624990 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 6.1e-110 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TrEMBL
Match: A0A0R0H9D4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G233000 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68 Identity = 133/179 (74.30%), Postives = 153/179 (85.47%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TrEMBL
Match: K7LWI8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68 Identity = 133/179 (74.30%), Postives = 153/179 (85.47%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TrEMBL
Match: A0A087H0S7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G029100 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.4e-68 Identity = 128/153 (83.66%), Postives = 144/153 (94.12%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TrEMBL
Match: A0A0R0HHN9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G231800 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 5.8e-68 Identity = 131/179 (73.18%), Postives = 153/179 (85.47%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TAIR10
Match: AT1G53440.1 (AT1G53440.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 258.5 bits (659), Expect = 3.6e-69 Identity = 126/153 (82.35%), Postives = 138/153 (90.20%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TAIR10
Match: AT1G53430.1 (AT1G53430.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 257.3 bits (656), Expect = 8.0e-69 Identity = 125/153 (81.70%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TAIR10
Match: AT3G14840.2 (AT3G14840.2 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 246.9 bits (629), Expect = 1.1e-65 Identity = 120/156 (76.92%), Postives = 137/156 (87.82%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TAIR10
Match: AT1G53420.1 (AT1G53420.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 240.4 bits (612), Expect = 1.0e-63 Identity = 115/152 (75.66%), Postives = 131/152 (86.18%), Query Frame = 1
BLAST of Csa4G624990.1 vs. TAIR10
Match: AT1G07650.2 (AT1G07650.2 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 231.1 bits (588), Expect = 6.1e-61 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 1
BLAST of Csa4G624990.1 vs. NCBI nr
Match: gi|700199886|gb|KGN55044.1| (hypothetical protein Csa_4G624990 [Cucumis sativus]) HSP 1 Score: 404.8 bits (1039), Expect = 8.8e-110 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa4G624990.1 vs. NCBI nr
Match: gi|778695665|ref|XP_011654031.1| (PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 6.1e-79 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 1
BLAST of Csa4G624990.1 vs. NCBI nr
Match: gi|947078553|gb|KRH27393.1| (hypothetical protein GLYMA_12G233000 [Glycine max]) HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68 Identity = 133/179 (74.30%), Postives = 153/179 (85.47%), Query Frame = 1
BLAST of Csa4G624990.1 vs. NCBI nr
Match: gi|659127575|ref|XP_008463773.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 3.7e-68 Identity = 130/153 (84.97%), Postives = 142/153 (92.81%), Query Frame = 1
BLAST of Csa4G624990.1 vs. NCBI nr
Match: gi|729390704|ref|XP_010552133.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Tarenaya hassleriana]) HSP 1 Score: 266.5 bits (680), Expect = 3.7e-68 Identity = 129/153 (84.31%), Postives = 143/153 (93.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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