Csa4G624450.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGATCAATATTGGCCTCCAATGCACAAATGTCGTTTCTGCTGACAGACCAGCCATGTCATCGGTGGTGAGCATGTTGGAGGGGAAGATTGCTGTAAAGGAGGTGGTTTCAGATCCCAGCATCTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGCAAACGACGAGCGAGAGCCAGACACAAAGTTTGACAATGGATGGACCATGGACTGGTTCTTCAACAACTGCCAGCGATCTCTATCCCATCAACATGGATTCTAAGTACTTGGAGAATAGGAACTAGAGTTGACATTACTTTGTCCTGAATGATTCTGATTACATGCTTTAATTTATGCTTAATCCTTTGTTTGTTGTTCTACATATGCTTTTTTCCCTTTTGAAGTAGGCAATACCATGCCCAATGGCCAATCCCTTGCCAAATATTGTATATTTTCAGATTCTTAGAACTTAGTTGTTTTACTATGTTTATATGAATTTTGAGTTGACAAGTTCAAATGTTCAAACTACTTCCTTTGTTGCTAAAACATTTGCTTCCCTAA ATGGCGATGATCAATATTGGCCTCCAATGCACAAATGTCGTTTCTGCTGACAGACCAGCCATGTCATCGGTGGTGAGCATGTTGGAGGGGAAGATTGCTGTAAAGGAGGTGGTTTCAGATCCCAGCATCTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGCAAACGACGAGCGAGAGCCAGACACAAAGTTTGACAATGGATGGACCATGGACTGGTTCTTCAACAACTGCCAGCGATCTCTATCCCATCAACATGGATTCTAAGTACTTGGAGAATAGGAACTAG ATGGCGATGATCAATATTGGCCTCCAATGCACAAATGTCGTTTCTGCTGACAGACCAGCCATGTCATCGGTGGTGAGCATGTTGGAGGGGAAGATTGCTGTAAAGGAGGTGGTTTCAGATCCCAGCATCTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGCAAACGACGAGCGAGAGCCAGACACAAAGTTTGACAATGGATGGACCATGGACTGGTTCTTCAACAACTGCCAGCGATCTCTATCCCATCAACATGGATTCTAAGTACTTGGAGAATAGGAACTAG MAMINIGLQCTNVVSADRPAMSSVVSMLEGKIAVKEVVSDPSISKQDVNAMWSQIYRQKGQTTSESQTQSLTMDGPWTGSSTTASDLYPINMDSKYLENRN*
BLAST of Csa4G624450.1 vs. Swiss-Prot
Match: Y3148_ARATH (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11 Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 1
BLAST of Csa4G624450.1 vs. Swiss-Prot
Match: Y1972_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3) HSP 1 Score: 57.8 bits (138), Expect = 8.2e-08 Identity = 38/98 (38.78%), Postives = 49/98 (50.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of Csa4G624450.1 vs. Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.1e-07 Identity = 40/96 (41.67%), Postives = 46/96 (47.92%), Query Frame = 1
BLAST of Csa4G624450.1 vs. Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 6.9e-07 Identity = 39/95 (41.05%), Postives = 45/95 (47.37%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TrEMBL
Match: A0A0A0L200_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G624450 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 3.9e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TrEMBL
Match: A0A0A0L4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G624420 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.7e-26 Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TrEMBL
Match: M5X7N1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003884mg PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-23 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TrEMBL
Match: M5X2Q8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001161mg PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 8.2e-23 Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TrEMBL
Match: M5WTB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001122mg PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-22 Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TAIR10
Match: AT3G14840.2 (AT3G14840.2 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 70.5 bits (171), Expect = 6.9e-13 Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TAIR10
Match: AT1G29720.1 (AT1G29720.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 57.8 bits (138), Expect = 4.6e-09 Identity = 38/98 (38.78%), Postives = 49/98 (50.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TAIR10
Match: AT1G07650.2 (AT1G07650.2 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TAIR10
Match: AT1G53430.1 (AT1G53430.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 55.5 bits (132), Expect = 2.3e-08 Identity = 40/96 (41.67%), Postives = 46/96 (47.92%), Query Frame = 1
BLAST of Csa4G624450.1 vs. TAIR10
Match: AT1G53440.1 (AT1G53440.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-08 Identity = 39/95 (41.05%), Postives = 45/95 (47.37%), Query Frame = 1
BLAST of Csa4G624450.1 vs. NCBI nr
Match: gi|449456691|ref|XP_004146082.1| (PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 5.6e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. NCBI nr
Match: gi|700199881|gb|KGN55039.1| (hypothetical protein Csa_4G624450 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 5.6e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of Csa4G624450.1 vs. NCBI nr
Match: gi|659127571|ref|XP_008463771.1| (PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Cucumis melo]) HSP 1 Score: 194.9 bits (494), Expect = 6.9e-47 Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 1
BLAST of Csa4G624450.1 vs. NCBI nr
Match: gi|778697805|ref|XP_011654409.1| (PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 6.7e-26 Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 1
BLAST of Csa4G624450.1 vs. NCBI nr
Match: gi|700199878|gb|KGN55036.1| (hypothetical protein Csa_4G624420 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 6.7e-26 Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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