Csa4G622230.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGAATAGAAACGTTAGAGAACTCTATACCCAATCTTATTGTTTCTTCAATTATTGAGATTTCAAAGATGTGGTATGCTCCCGATACAATAATAAGTATTGTTTTAGTGTTATTATTATTATTGGGATGGAAATTAGCTGATTGGATTTGGTTCCGCCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCCACGGCGACTTGAAGGAGAGAGCCGCCATGAGAGAAGAAGCAATGTCCAAGCCCATGAACTTCTCCAACCATATTGCTCCACGTGTCATTCCCTCTATCTATCATACCATCCAACGTTATGGTAACACTTTTATTCCCTATTTTTCCTTCTCATATATCCTTTTCTTCTTCTTCTTCAAATAAGATTTCAAAGAAATAAATTAAAATTAGGGTTTCATTTGGTATTGAAGAGCTGTGTTTTATATGATTACATTTCTATTTACTGTTTGAAAATTAATTTATTACTTCTATCCATTTTCAATCAATGTTTTACAAAAGTAATGCAAATTTTTAAAGACTAAAACTGCTCTAGTCTTTTCCTTTTCAGAATTTACTTATTTTTACTTCACAAAAATGAAAACCATGGTATGCAATTGGGAGGCTTAATTTAATTTCTATCTTAAAAGAATGTAAAAAAAAAACAATTTGTATGCTCTCATGGAAGTAACATATATACTATGTATTTGCTGAAAATATTGAGTCACTAGTTAGTTTATCGATTTATTTAGGAAAGAAATCTTATTAAATTGTAACACTAAATTCTAAAATAGAGATTAAATAATTACAAATTTTAAAGAATAGTAACTAAATTTTTCTATAGTAAAGATCAGGGACTATGGATTAAATCGTGATAAAATAAAGTATAAAAACTAAATTGCTATATTATTGTATAAGAACTAAGTTATGTACTGGGATTTTAATATATTCAGCAGCCAACCTATATTTACATACATAGTTTAACAGAATAAAATATAGATAGGATAGAAAAATAGAAAATTTATTGTAATGGGAAGAAGTATTGTTCAAAATAGTAACATGTATCGCTTTAGTAAAATGGTGCCTAAAATGGATTATCATCAACTCCCAATATGTTGATTTTAAACTGTGCAGGCAAGAATTCATTTATGTGGCTTGGTCCCATACCAAGAGTGCACATAATGGACCCTGAACAACTCAAAACTGTGTTCTCATTCTACAATGATTTCCAAAAGCCAACTATGAATCCCTTTACCAAGTTGCTTGTACAAGGAATTGTAAATCTTGATGGAGAAAAATGGGTCAAACACAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTCAAGGTATCTATAGCTTTTTCTAAAAGTGAAAGAGATGACTATTTCAGTTTTTTTTTTCTTTCAAAATACACTTTTATTATTATCTATAGTTCCTAAGAAACAAGAAATGCAATAAGAAAACGAAAAAAAGTTATCAAACGAAGTACCTAATTCTAAGTTCTCACACATACCTTTACATTGGCTCGTAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAGTGGGAAAGCATGGTCTCTAAAGAGGGATCTTGTGAGTTAGATGTAATGCCTTATCTAAAAAATATGGCTTCTGATGTGATTTCTCGGACTGCATTTGGGAGCAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAACTAATTTTGTGATTCAAACTACCTTAGGGATATATATTCCTGGATGGAGGTAAAAACACTATTTATATCCAACATGATTGTATATACATCTATTGTGAAATAATTCATGTCATGATTATTATTTTTTGTGCAGATTTCTACCCACAAAGTTAAACAGAAAAATGAAAGAGATAAGCAAAGAGATAACAACTTTGATATTGGGTATTATGGATGA ATGTGGTATGCTCCCGATACAATAATAAGTATTGTTTTAGTGTTATTATTATTATTGGGATGGAAATTAGCTGATTGGATTTGGTTCCGCCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCCACGGCGACTTGAAGGAGAGAGCCGCCATGAGAGAAGAAGCAATGTCCAAGCCCATGAACTTCTCCAACCATATTGCTCCACGTGTCATTCCCTCTATCTATCATACCATCCAACGTTATGGCAAGAATTCATTTATGTGGCTTGGTCCCATACCAAGAGTGCACATAATGGACCCTGAACAACTCAAAACTGTGTTCTCATTCTACAATGATTTCCAAAAGCCAACTATGAATCCCTTTACCAAGTTGCTTGTACAAGGAATTGTAAATCTTGATGGAGAAAAATGGGTCAAACACAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTCAAGATTTCTACCCACAAAGTTAAACAGAAAAATGAAAGAGATAAGCAAAGAGATAACAACTTTGATATTGGGTATTATGGATGA ATGTGGTATGCTCCCGATACAATAATAAGTATTGTTTTAGTGTTATTATTATTATTGGGATGGAAATTAGCTGATTGGATTTGGTTCCGCCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCCACGGCGACTTGAAGGAGAGAGCCGCCATGAGAGAAGAAGCAATGTCCAAGCCCATGAACTTCTCCAACCATATTGCTCCACGTGTCATTCCCTCTATCTATCATACCATCCAACGTTATGGCAAGAATTCATTTATGTGGCTTGGTCCCATACCAAGAGTGCACATAATGGACCCTGAACAACTCAAAACTGTGTTCTCATTCTACAATGATTTCCAAAAGCCAACTATGAATCCCTTTACCAAGTTGCTTGTACAAGGAATTGTAAATCTTGATGGAGAAAAATGGGTCAAACACAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTCAAGATTTCTACCCACAAAGTTAAACAGAAAAATGAAAGAGATAAGCAAAGAGATAACAACTTTGATATTGGGTATTATGGATGA MWYAPDTIISIVLVLLLLLGWKLADWIWFRPKKLEKLLRQQGFAGNSYRILHGDLKERAAMREEAMSKPMNFSNHIAPRVIPSIYHTIQRYGKNSFMWLGPIPRVHIMDPEQLKTVFSFYNDFQKPTMNPFTKLLVQGIVNLDGEKWVKHRKIINPAFHLEKLKISTHKVKQKNERDKQRDNNFDIGYYG*
BLAST of Csa4G622230.1 vs. Swiss-Prot
Match: C7A29_PANGI (Cytochrome P450 CYP72A219 OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-49 Identity = 87/152 (57.24%), Postives = 111/152 (73.03%), Query Frame = 1
BLAST of Csa4G622230.1 vs. Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45 Identity = 90/190 (47.37%), Postives = 121/190 (63.68%), Query Frame = 1
BLAST of Csa4G622230.1 vs. Swiss-Prot
Match: C7A15_ARATH (Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41 Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of Csa4G622230.1 vs. Swiss-Prot
Match: C7A11_ARATH (Cytochrome P450 72A11 OS=Arabidopsis thaliana GN=CYP72A11 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.8e-39 Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of Csa4G622230.1 vs. Swiss-Prot
Match: C7A13_ARATH (Cytochrome P450 72A13 OS=Arabidopsis thaliana GN=CYP72A13 PE=2 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.9e-38 Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TrEMBL
Match: A0A0A0KZZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622230 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 4.1e-108 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TrEMBL
Match: A0A0A0KZF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622740 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.5e-75 Identity = 136/191 (71.20%), Postives = 159/191 (83.25%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TrEMBL
Match: A0A0A0KZE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621220 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.3e-74 Identity = 136/169 (80.47%), Postives = 153/169 (90.53%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TrEMBL
Match: A0A0A0M1P6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G574240 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.3e-63 Identity = 114/162 (70.37%), Postives = 134/162 (82.72%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TrEMBL
Match: A1XEL4_TOBAC (CYP72A57 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50 Identity = 95/153 (62.09%), Postives = 123/153 (80.39%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TAIR10
Match: AT3G14690.1 (AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15) HSP 1 Score: 171.0 bits (432), Expect = 7.0e-43 Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TAIR10
Match: AT3G14630.1 (AT3G14630.1 cytochrome P450, family 72, subfamily A, polypeptide 9) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-40 Identity = 73/157 (46.50%), Postives = 101/157 (64.33%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TAIR10
Match: AT3G14650.1 (AT3G14650.1 cytochrome P450, family 72, subfamily A, polypeptide 11) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-40 Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TAIR10
Match: AT3G14660.1 (AT3G14660.1 cytochrome P450, family 72, subfamily A, polypeptide 13) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-39 Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 1
BLAST of Csa4G622230.1 vs. TAIR10
Match: AT3G14680.1 (AT3G14680.1 cytochrome P450, family 72, subfamily A, polypeptide 14) HSP 1 Score: 159.5 bits (402), Expect = 2.1e-39 Identity = 74/159 (46.54%), Postives = 103/159 (64.78%), Query Frame = 1
BLAST of Csa4G622230.1 vs. NCBI nr
Match: gi|700199855|gb|KGN55013.1| (hypothetical protein Csa_4G622230 [Cucumis sativus]) HSP 1 Score: 398.7 bits (1023), Expect = 5.9e-108 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Csa4G622230.1 vs. NCBI nr
Match: gi|778695562|ref|XP_011654016.1| (PREDICTED: cytochrome P450 CYP72A219-like [Cucumis sativus]) HSP 1 Score: 344.0 bits (881), Expect = 1.7e-91 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of Csa4G622230.1 vs. NCBI nr
Match: gi|700199857|gb|KGN55015.1| (hypothetical protein Csa_4G622740 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 5.0e-75 Identity = 136/191 (71.20%), Postives = 159/191 (83.25%), Query Frame = 1
BLAST of Csa4G622230.1 vs. NCBI nr
Match: gi|700199852|gb|KGN55010.1| (hypothetical protein Csa_4G621220 [Cucumis sativus]) HSP 1 Score: 286.6 bits (732), Expect = 3.2e-74 Identity = 136/169 (80.47%), Postives = 153/169 (90.53%), Query Frame = 1
BLAST of Csa4G622230.1 vs. NCBI nr
Match: gi|778695577|ref|XP_004146006.2| (PREDICTED: cytochrome P450 CYP72A219-like [Cucumis sativus]) HSP 1 Score: 285.8 bits (730), Expect = 5.5e-74 Identity = 131/171 (76.61%), Postives = 151/171 (88.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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