Csa4G620620 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATGATAAGGTTAATATTCAGAAGCTTAGCTTTAATGGTGGTACACAAACAAACTGCCGCATCCAAATCCACTAGTCCTTCAAGAACAGGGCAGCAAGTTTGTTTCGTACGGTCACCAATTCCGATATGGATCAACCCACCCAACAAGTCCACACACGCTCCCAACTTCAGCGTGTCAATGGGGCATGTCTCCCGTTTCGGCGGCGGAGGAGGACAAGGAGTCGATGGGGATGGAACCACCGGCGCTGGCTTTAATGGTGGACTGGGCACTGGAACATAA ATGGGAATGATAAGGTTAATATTCAGAAGCTTAGCTTTAATGGTGGTACACAAACAAACTGCCGCATCCAAATCCACTAGTCCTTCAAGAACAGGGCAGCAAGTTTGTTTCGTACGGTCACCAATTCCGATATGGATCAACCCACCCAACAAGTCCACACACGCTCCCAACTTCAGCGTGTCAATGGGGCATGTCTCCCGTTTCGGCGGCGGAGGAGGACAAGGAGTCGATGGGGATGGAACCACCGGCGCTGGCTTTAATGGTGGACTGGGCACTGGAACATAA ATGGGAATGATAAGGTTAATATTCAGAAGCTTAGCTTTAATGGTGGTACACAAACAAACTGCCGCATCCAAATCCACTAGTCCTTCAAGAACAGGGCAGCAAGTTTGTTTCGTACGGTCACCAATTCCGATATGGATCAACCCACCCAACAAGTCCACACACGCTCCCAACTTCAGCGTGTCAATGGGGCATGTCTCCCGTTTCGGCGGCGGAGGAGGACAAGGAGTCGATGGGGATGGAACCACCGGCGCTGGCTTTAATGGTGGACTGGGCACTGGAACATAA MGMIRLIFRSLALMVVHKQTAASKSTSPSRTGQQVCFVRSPIPIWINPPNKSTHAPNFSVSMGHVSRFGGGGGQGVDGDGTTGAGFNGGLGTGT*
BLAST of Csa4G620620 vs. TrEMBL
Match: A0A0A0L1W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G620620 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa4G620620 vs. TrEMBL
Match: I3SLI2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-20 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 1
BLAST of Csa4G620620 vs. TrEMBL
Match: U5G562_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01010g PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.5e-18 Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = 1
BLAST of Csa4G620620 vs. TrEMBL
Match: A0A0K9QP24_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_157770 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-14 Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 1
BLAST of Csa4G620620 vs. TrEMBL
Match: A0A061GMW5_THECC (Uncharacterized protein (Fragment) OS=Theobroma cacao GN=TCM_047111 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-14 Identity = 51/96 (53.12%), Postives = 59/96 (61.46%), Query Frame = 1
BLAST of Csa4G620620 vs. NCBI nr
Match: gi|700199841|gb|KGN54999.1| (hypothetical protein Csa_4G620620 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 2.2e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa4G620620 vs. NCBI nr
Match: gi|388506116|gb|AFK41124.1| (unknown [Lotus japonicus]) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-20 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 1
BLAST of Csa4G620620 vs. NCBI nr
Match: gi|566173834|ref|XP_006380876.1| (hypothetical protein POPTR_0006s01010g [Populus trichocarpa]) HSP 1 Score: 99.4 bits (246), Expect = 3.7e-18 Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = 1
BLAST of Csa4G620620 vs. NCBI nr
Match: gi|902177673|gb|KNA08987.1| (hypothetical protein SOVF_157770 [Spinacia oleracea]) HSP 1 Score: 86.3 bits (212), Expect = 3.2e-14 Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 1
BLAST of Csa4G620620 vs. NCBI nr
Match: gi|590578584|ref|XP_007013551.1| (Uncharacterized protein TCM_047111, partial [Theobroma cacao]) HSP 1 Score: 84.7 bits (208), Expect = 9.3e-14 Identity = 51/96 (53.12%), Postives = 59/96 (61.46%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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