Csa4G616770.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGAGATACTAAAAAAATTCATTAATTTCTATTATGAAATGTTCATTTGGCAAGAGTTGATCAACAGAATATTCCACTTTCTTAGTTAGAATCCTGCCTAGGGAAGTAACTGCGTTTTAGATGTATACATAGGTAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGAATTTTTTTACTAACAATATTAATATCAGGTGGACATATGCGGATCCATCATGGGCGCGAATTGCTGCTCTTGTTCCAGTTGTTGTAGCATGTGCTGAGGCAGGTGATGAGGTTGCTAACAACATCCTCCTCGATTCAGTTGAAGAGCTGGCTTTGAGTGTGAGAGCTGTAATTCAAAGACTCGGCCTAGCTGGTGAAGGTATGGAATCAAACAGTCATTCATTATTTATTAAGATCCATTTCCTTTTCATGCACTGCATTTATATCAGAATTAACCATTTATTACGCTTTACTTTTGTGTCCATTTGATCCACTTATTATAATTGATGTGCATTATAATGTGACTGCATGTATGAGAGGAAGTTACATTTCGATTCACTTATGATGGGGTTGTAGTATTTTGTAATCAACAGACAATAAACCCTGTACTTTTCTACAAGTACTCCAAGCTTCTTCTGGCGAAATGTCATAAAGTCTAAAATGCCCCTAACCTGAATTTTCGTCCCATGACCACTTGCAACTAGCGACTAATATTTTCTCCATTGTGAGATTCAAAATTTGATAAAGCCCAACGTGTGACCTTTGTTGATGAACACGTCTTGCTCTAGATCAATTTTCGTGTTCTACCAAAATTGTGAAATTCATCCCTCTACTTTTGAAAAGTGAGCTCCCAGAAAAGCCCCACTAGGCCTCTCTCTTCTAATGAAGCACCTAGGGCTAGTGGTGTGTCTTGTTTCCTAAGCCACTTGTAATTTAGAACTTTTTTAGTCTATTTAGTTTTGTTATTTTTTTTAGGGAATATCACTATCTTATTATTCTGCACATGCATTTATTTTTCATATGTAAAAAATCTAGTACACCTTACCCAAGAAAAAGAAAAAAAAAAAAAAAGAAGCCGTTGGCCTTTCTTTTCCACTCACACTTAAAAGCTCCAGAAGACTACGCTTTGGTGCATCTTACACGTTTAAAAACACCGTTGATGCTTATTATTTTTGAGCTAGGACAAGCCGTCATAGTATATTGTTGATAGGGCCTTGTTATTTTGGATCATTTGCCCGATGCTTAATAAATCCTCAGTCTTTACTGGTCGAGAGTCAAGTTTGTTTCTCATTCAGCATCTTGAATATGGTGAATCAAAATTCTGTGTTGCAGCCATACTATTCCGTACTAACTTTTCCCCTTAAGATCTCTGCCTATTCTTGCTTTCAATAATAATTTAATTACACTTGATTTGCGATCTTCTTCATCTGTTTGAGTTACAATCCCTTGTACAGATGGACAAGAGGCATTTCCTCTCGTTATGGTTGGTGGTGTCCTCGAAGCAAAAAGGAGGTGGGATATAGCAAAAAAAGTCATAAATTCCATATCCAAAGAATATCCAGGGATTCTTCCTGTTTGGCCTAAGGTAAGCCTATTTTACACTCTTTACTGCATGTTCTTGCAATTATGGTTTCTGTTTTATTTTACTTTTTAAAGTTATGTGAATTCATTTACTAATTAATAGTGGACTACTAATAATAACAAATTAAGAAAATGATAACTCTTTTCTAGATACCCTAGTTTTCTTTAACTCACAATTGAAGAGAAGCAACTGGTGCCTAAGAGCCTGTTTATTTTAACTCTTTTATTAAAAACTGAAAAAAATAAACTTTGAGAGGGTAGTGGGGGCGAGGAGTGGAGTTGCGAACTCCATGGAGTTATGAAGTCTAGAAAATTGTAAACTTCTGAGGTATCATAGTGTATGAAGTTAATAAGATTTAAAATTGATGTTTTTATTAGTGGGACTCACAAACTTCTCGGACCAAACAAGGATTGGAGTTCATTACTCCATTTTCCGCAACCTCCTACTTCCAAAATCCTTGGGTCAAACATCCTCGGAAAGTGTTTCAAAAACTATTTTGAGTAGTTGCAAAACACTTCAATTCTTTTCAAAATTAAACATTCGAAAAGTTAAATTAAACACACCCTAAATTCAAGTTAAATTATGAATTATGGCAACAAATTGTACTCTTATCCCTCATCGGTTGTCTAGCATGAGAATCAGAAAGCGAAAGCAATCCCTGCGTTTCTTACTGTTTCAAAATTTTCATTTTTCTTAACAGGTGGAGCCTGCACTTGGCGCAGCGTTGCTGGCCTGGAACTTTTTAAGCAAGGATTATCAACAGGAAGGAATATAG ATGAAAAATGCAAGCACGGTTTGGGGAGGGAATTTTTTTACTAACAATATTAATATCAGGTGGACATATGCGGATCCATCATGGGCGCGAATTGCTGCTCTTGTTCCAGTTGTTGTAGCATGTGCTGAGGCAGGTGATGAGGTTGCTAACAACATCCTCCTCGATTCAGTTGAAGAGCTGGCTTTGAGTGTGAGAGCTGTAATTCAAAGACTCGGCCTAGCTGGTGAAGATGGACAAGAGGCATTTCCTCTCGTTATGGTTGGTGGTGTCCTCGAAGCAAAAAGGAGGTGGGATATAGCAAAAAAAGTCATAAATTCCATATCCAAAGAATATCCAGGGATTCTTCCTGTTTGGCCTAAGGTGGAGCCTGCACTTGGCGCAGCGTTGCTGGCCTGGAACTTTTTAAGCAAGGATTATCAACAGGAAGGAATATAG ATGAAAAATGCAAGCACGGTTTGGGGAGGGAATTTTTTTACTAACAATATTAATATCAGGTGGACATATGCGGATCCATCATGGGCGCGAATTGCTGCTCTTGTTCCAGTTGTTGTAGCATGTGCTGAGGCAGGTGATGAGGTTGCTAACAACATCCTCCTCGATTCAGTTGAAGAGCTGGCTTTGAGTGTGAGAGCTGTAATTCAAAGACTCGGCCTAGCTGGTGAAGATGGACAAGAGGCATTTCCTCTCGTTATGGTTGGTGGTGTCCTCGAAGCAAAAAGGAGGTGGGATATAGCAAAAAAAGTCATAAATTCCATATCCAAAGAATATCCAGGGATTCTTCCTGTTTGGCCTAAGGTGGAGCCTGCACTTGGCGCAGCGTTGCTGGCCTGGAACTTTTTAAGCAAGGATTATCAACAGGAAGGAATATAG MKNASTVWGGNFFTNNINIRWTYADPSWARIAALVPVVVACAEAGDEVANNILLDSVEELALSVRAVIQRLGLAGEDGQEAFPLVMVGGVLEAKRRWDIAKKVINSISKEYPGILPVWPKVEPALGAALLAWNFLSKDYQQEGI*
BLAST of Csa4G616770.1 vs. Swiss-Prot
Match: NAGK_DICDI (N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 3.9e-11 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TrEMBL
Match: A0A0A0KZR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G616770 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 5.3e-76 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TrEMBL
Match: B9IA59_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14040g PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 4.7e-48 Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TrEMBL
Match: A0A0A0L083_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G062910 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.3e-47 Identity = 96/124 (77.42%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TrEMBL
Match: A0A151U1V7_CAJCA (N-acetyl-D-glucosamine kinase OS=Cajanus cajan GN=KK1_005932 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 8.9e-47 Identity = 94/124 (75.81%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TrEMBL
Match: A0A059DD75_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00888 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46 Identity = 93/124 (75.00%), Postives = 111/124 (89.52%), Query Frame = 1
BLAST of Csa4G616770.1 vs. TAIR10
Match: AT1G30540.1 (AT1G30540.1 Actin-like ATPase superfamily protein) HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41 Identity = 79/118 (66.95%), Postives = 97/118 (82.20%), Query Frame = 1
BLAST of Csa4G616770.1 vs. NCBI nr
Match: gi|700199800|gb|KGN54958.1| (hypothetical protein Csa_4G616770 [Cucumis sativus]) HSP 1 Score: 291.6 bits (745), Expect = 7.7e-76 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Csa4G616770.1 vs. NCBI nr
Match: gi|449463605|ref|XP_004149522.1| (PREDICTED: LOW QUALITY PROTEIN: N-acetyl-D-glucosamine kinase-like [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 2.6e-63 Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 1
BLAST of Csa4G616770.1 vs. NCBI nr
Match: gi|659129372|ref|XP_008464652.1| (PREDICTED: N-acetyl-D-glucosamine kinase-like [Cucumis melo]) HSP 1 Score: 248.8 bits (634), Expect = 5.7e-63 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 1
BLAST of Csa4G616770.1 vs. NCBI nr
Match: gi|224131396|ref|XP_002321074.1| (hypothetical protein POPTR_0014s14040g [Populus trichocarpa]) HSP 1 Score: 198.7 bits (504), Expect = 6.8e-48 Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Csa4G616770.1 vs. NCBI nr
Match: gi|743871070|ref|XP_011033758.1| (PREDICTED: N-acetyl-D-glucosamine kinase-like [Populus euphratica]) HSP 1 Score: 196.8 bits (499), Expect = 2.6e-47 Identity = 94/124 (75.81%), Postives = 108/124 (87.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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