BLAST of Csa4G613170 vs. Swiss-Prot
Match:
PP131_ARATH (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 735.3 bits (1897), Expect = 4.9e-211
Identity = 376/577 (65.16%), Postives = 462/577 (80.07%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--IQKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ + S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTLP--NWK----IGKL--DQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKT 120
FT+ +WK G D +S E L+D+F HLE +V G KP+V +TQLLYDLCK
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 CKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATY 180
+++KAI+V+E+M+ SGIIPDA++YT+LV+ LC++GNVGYAMQLV+KME++GYP+NT TY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA KLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DAM LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG +R+PS VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+M+YR C PNEGTYNAI +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 FSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVME--ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 540
+ S+ME EN K +N+N++ILG CK RRTDLA++VFE+MV K + NETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 IHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDLN 563
HE E++LA EVL EL+LR VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of Csa4G613170 vs. Swiss-Prot
Match:
PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 371.3 bits (952), Expect = 1.9e-101
Identity = 192/489 (39.26%), Postives = 300/489 (61.35%), Query Frame = 1
Query: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
L Q + L + F LE MV G PD+ T L+ C+ K RKA K++E++ GSG
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
+PD +Y ++S C+ G + A+ ++D+M + TYN+++R LC G L Q+++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 228
Query: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
+LDR++Q+ P+ TY+ L+EA ++ G A KLLDE+ +G P++V+YNVL+ G+C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288
Query: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308
KEGR ++A++ ++PS G PNV+++NI+LRS+C+ GRW +A LLA+M SPS V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348
Query: 309 TYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368
T+NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408
Query: 369 MYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNT 428
+ R C P+ TYN + T LC++G V++A I+ L +K Y VI L + G T
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468
Query: 429 YPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSL 488
A +LL EM PD+ TYSSL+ GL EG ++EAI+ F E I+ + +NS+
Sbjct: 469 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 528
Query: 489 ILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 548
+LG CKSR+TD A+D M+ +G NET+YTIL+EG+ +E A E+L EL + +
Sbjct: 529 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 588
Query: 549 INQSTVERL 556
+ +S+ E++
Sbjct: 589 MKKSSAEQV 594
BLAST of Csa4G613170 vs. Swiss-Prot
Match:
PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 3.4e-87
Identity = 174/479 (36.33%), Postives = 271/479 (56.58%), Query Frame = 1
Query: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
LE MV KG PDV T+L+ + KA++VME++ G PD +Y L++ C+
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171
Query: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +T TYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Y+ L+EA E G DEA KL+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L N+G+WEE L+ +M ++ P+ VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ M+ C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDV 504
PD TY+S+I LC EGM++EA E+ M YN ++LG CK+ R + A++V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDL 562
E MVG G NETTYT+L+EGI A E+ +L D I++ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of Csa4G613170 vs. Swiss-Prot
Match:
PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 5.3e-64
Identity = 135/454 (29.74%), Postives = 238/454 (52.42%), Query Frame = 1
Query: 91 KGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGY 150
KG +++ + ++ C+ K+ A M +I G P+ +++ L++ LC +G V
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 151 AMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ + T N+LV GLC+ G +++ L+D++++ G PNA TY +L
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 211 AAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSP 270
K A +LL ++ + K + V Y++++ GLCK G ++A LF E+ KG +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVL 330
N+++YNIL+ CN GRW++ LL +M + +P+ VT+++LI S G+ A E+
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEE 390
+EMI P +Y +I CK+ +D + +D M+ + C+PN T+N + C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 391 GMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
+ + + + + + + Y +I C G A +L EM P+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 451 SSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEIMVG 510
L+ GLC G +A+EIF +E++ ++LD YN +I G C + + D A D+F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 511 KGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 543
KG TY I++ G+ + + A + R+++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
HSP 2 Score: 206.1 bits (523), Expect = 1.0e-51
Identity = 124/451 (27.49%), Postives = 223/451 (49.45%), Query Frame = 1
Query: 75 ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS 134
E R+++A ++ MVE G KPD+ L+ LC + K +A+ +++ M+ G P+A +
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
Y +++ +C+ G AM+L+ KMEE + Y+ ++ GLC HG+L + L + +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTE 254
KG+ N TY+ L+ D+ +KLL ++I + PN+V+++VL+ KEG+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 255 DAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILI 314
+A +L +E+ +G +P+ ++Y L+ C E ++AN ++ M P+ T+NILI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 315 GSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN 374
R + LE+ +M +YN +I C+ K+++ + +M+ R
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 375 PNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQL 434
PN TY + LC+ G ++A I + + + Y I+I +C A+ L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 435 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKL-DTENYNSLILGCCK 494
+ G P TY+ +I GLC +G L+EA +F MEE+ D YN LI
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 495 SRRTDLALDVFEIMVGKGYLANETTYTILVE 524
++ + E + G+ + +T ++++
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVID 621
HSP 3 Score: 206.1 bits (523), Expect = 1.0e-51
Identity = 123/474 (25.95%), Postives = 237/474 (50.00%), Query Frame = 1
Query: 75 ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS 134
+++ +DA M+ P V ++L + KT + + + + M GI + +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
+ +++ CR + A + K+ + GY NT T+++L+ GLC+ G ++++L+L+DR++
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTE 254
+ G P+ T + L+ EA L+D+++ G +PN V+Y +L +CK G+T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 255 DAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILI 314
AM+L R++ + + V Y+I++ LC G + A L EM+ + + +TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 315 GSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN 374
G GR + ++L +MI+ + P +++ +I K+ K+ + +M++R
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 375 PNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQL 434
P+ TY + I C+E + +A ++ + +K + I+I C+ +L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 435 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCK 494
+M+ G D+ TY++LI+G C G LN A E+F M + + Y L+ G C
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 495 SRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 547
+ ++ AL++FE + + Y I++ G+ + ++D A ++ L L+ V
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
BLAST of Csa4G613170 vs. Swiss-Prot
Match:
PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 1.2e-63
Identity = 130/456 (28.51%), Postives = 239/456 (52.41%), Query Frame = 1
Query: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
M KG ++ + ++ C+ K+ A M ++ G PD + L++ LC +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
V A++LVD+M E G+ T N+LV GLC++G ++ ++ L+DR+++ G PN TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
+L K A +LL ++ + K + V Y++++ GLCK+G ++A LF E+ KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHAL 327
F ++++YN L+ CN GRW++ LL +M + SP+ VT+++LI S G+ A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 328 EVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-L 387
++L+EM++ P +YN +I CK+ +++ ++ +D M+ + C+P+ T+N +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 388 CEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDS 447
C+ + + + + + + + Y ++ C+ G A +L EM PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 448 FTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEI 507
+Y L+ GLC G L +A+EIF +E++ ++LD Y +I G C + + D A D+F
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 508 MVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 542
+ KG + Y I++ + + + A + R++
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
HSP 2 Score: 235.7 bits (600), Expect = 1.2e-60
Identity = 138/491 (28.11%), Postives = 252/491 (51.32%), Query Frame = 1
Query: 77 RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136
+L+ AF + +++ G +PD LL LC C++ +A+++++ M+ G P +
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK 196
LV+ LC G V A+ L+D+M E G+ N TY ++ +C G +++LL ++ ++
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDA 256
+ +A YS +++ K+ D A L +E+ KG K ++++YN L+ G C GR +D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
+L R++ + SPNVV++++L+ S EG+ EA+ LL EM +P+T+TYN LI
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376
R E A+++++ MI P ++N +I CK ++D ++ +M R N
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 377 EGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 436
TYN + C+ G ++ A + Q + +++ YKI++ LC G A ++
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 437 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENIKLDTENYNSLILGCCKSR 496
++ K D Y +I G+C +++A ++F S+ + +KLD YN +I C+
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 497 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV-INQSTVE 556
A +F M +G+ +E TY IL+ + + + A E++ E++ + STV+
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 557 RLVMQYDLNEL 565
++ EL
Sbjct: 618 MVINMLSSGEL 628
HSP 3 Score: 208.0 bits (528), Expect = 2.7e-52
Identity = 124/481 (25.78%), Postives = 234/481 (48.65%), Query Frame = 1
Query: 68 KLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSG 127
KL ++ +DA M++ P V +L + KT + + + + M G
Sbjct: 59 KLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 128 IIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSL 187
I + + +++ CR + YA + K+ + GY +T +N+L+ GLC+ ++++L
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 188 QLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGL 247
+L+DR+++ G P T + L+ +A L+D ++ G +PN V+Y +L +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 248 CKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPST 307
CK G+T AM+L R++ + + V Y+I++ LC +G + A L EM+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 308 VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQ 367
+TYN LIG GR + ++L +MI+ + P +++ +I K+ K+ + L +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 368 MMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGN 427
MM R PN TYN+ I C+E ++EA ++ + +K + I+I C+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 428 TYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNS 487
+L EM+ G ++ TY++L++G C G L A ++F M ++ D +Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 488 LILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRD 547
L+ G C + + AL++F + + Y I++ G+ + ++D A ++ L L+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
BLAST of Csa4G613170 vs. TrEMBL
Match:
A0A0A0L2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G613170 PE=4 SV=1)
HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
Query: 541 LQLRDVINQSTVERLVMQYDLNELPL 567
LQLRDVINQSTVERLVMQYDLNELPL
Sbjct: 541 LQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of Csa4G613170 vs. TrEMBL
Match:
E5GBB3_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=1)
HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 542/566 (95.76%), Postives = 554/566 (97.88%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480
Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540
Query: 541 LQLRDVINQSTVERLVMQYDLNELPL 567
LQLRDVI+QST+ERLVMQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of Csa4G613170 vs. TrEMBL
Match:
A5AJ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00450 PE=4 SV=1)
HSP 1 Score: 892.9 bits (2306), Expect = 2.0e-256
Identity = 436/567 (76.90%), Postives = 503/567 (88.71%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MA L+N +SPIT+PSPE R+ CGFFS +PN+ LSLNKGFS+VLASTQITISPKD +FT
Sbjct: 1 MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNW+ GK D ++++LRLNDAF +LE+M+ KG KPD QATQL+Y+LCK+ KMRKA KVM
Sbjct: 61 LPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
E+MIGSG PD AS TFLV++LC++GNVGYAMQLV+KMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 ELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL+QSLQ+LD+ ++KGLVPN +TYSFLLEAAYKERGADEA +LLDEI+AKGGKPNLVSY
Sbjct: 181 GNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTE+AMQ FR+LPSKGFSPNVVSYNILLRSLC EGRWE+A LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
ERSPS VT+NILIGSL LHG+T+ ALEVL++M RARFK TA+SYNPIIARLCK+ KVDL
Sbjct: 301 GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYR CNPNEGTYNAIA LCEEG VQEAFSIIQSLGNKQ+ ST +FYK VI+S
Sbjct: 361 VVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLD 480
LCRKGNTYPAFQLLYEMTKYGF PDS+TYSSLIRGLC EGML+EA+EIFS+MEEN + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPD 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
+N+N+LILG CK R+TDL+L VFE+MV KGY+ NETTYTI+VEGI H++EM+LA VL+
Sbjct: 481 VDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNELPL 567
EL LR + +ST+ERLVMQYDL LP+
Sbjct: 541 ELYLRQAVGRSTLERLVMQYDLEGLPI 567
BLAST of Csa4G613170 vs. TrEMBL
Match:
A0A061FH66_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_032450 PE=4 SV=1)
HSP 1 Score: 890.6 bits (2300), Expect = 1.0e-255
Identity = 431/565 (76.28%), Postives = 506/565 (89.56%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLN++SP+TNPSPETTR+ CGFF IPN+ SLNKGF++VLA+TQITISPKD++FT
Sbjct: 1 MATLLNSMSPMTNPSPETTRKTCGFFYQIPNLHSFSLNKGFTRVLATTQITISPKDSVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWK GK D KS+ELRLNDAFFH+E+MV KGQKPDV QATQLLYDLCK KM+K+I+V+
Sbjct: 61 LPNWKTGKNDTKSRELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVL 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMM+ SGIIPDAASYTFLV+ LC++GNVG+AMQLV+KME +GYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMVNSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL QSLQLLD+LIQ+GLVPNA+TYSFLLEAAYKE+G +EA KLLD+IIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT++A++ FR LP+KGF PNVVSYNILLR+LC EG+W+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCYEGQWKEANELLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
++RSPS VTYNILIGSL LHGRTEHAL+VL+EMIR RFK TA+SYNPIIARLC+++KVDL
Sbjct: 301 EDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIRGRFKATATSYNPIIARLCQEKKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQM+YR C PNEGTYNA A LCE+GMVQEAFSIIQSLG+KQ + +FYK VI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNATAVLCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
LCRKGNTYPAFQLLYEMTK GF PDS+TYSSLIRGLC+EGML EA+EI VMEE N + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPD 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
+N+N+LILG CKS RTDL+L VFE+++ KGY+ NETTYTILVEGI HE +++LA EVL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNEL 565
EL +R+V++Q VERLVMQY+L+ +
Sbjct: 541 ELHVREVVSQHAVERLVMQYNLSAI 565
BLAST of Csa4G613170 vs. TrEMBL
Match:
A0A0D2U0G5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G354800 PE=4 SV=1)
HSP 1 Score: 879.4 bits (2271), Expect = 2.3e-252
Identity = 427/565 (75.58%), Postives = 503/565 (89.03%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATL+N++S +TNPSPETTRR GFF I N+ SL+KGFSKVLA+TQITISPKD++FT
Sbjct: 1 MATLINSISFLTNPSPETTRRPSGFFYQIANLHYFSLSKGFSKVLATTQITISPKDSVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWK GK D KS+ELRL+DA+FH+E+MV KGQKPDV QATQLLYDLCK KM+K+I+VM
Sbjct: 61 LPNWKTGKSDSKSRELRLSDAYFHMEYMVGKGQKPDVVQATQLLYDLCKVNKMKKSIRVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMM+ SGIIPDAASYTFLV+ LC++GNVG+AMQLV+KME +GYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMVDSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL QSLQLLDRLIQKGLVPN +TYSFLLEAAYKE+G +EA+KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLKQSLQLLDRLIQKGLVPNEFTYSFLLEAAYKEKGVNEATKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT++A++ FR+LP+KGF+PNVVSYNI+LR+LC EGRW+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRDLPAKGFNPNVVSYNIVLRNLCYEGRWKEANELLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
D+RSPS VTYNILIGSL LHGRT HA++VL+EMIR RFK +A+SYNPIIA+LC++ KVDL
Sbjct: 301 DDRSPSVVTYNILIGSLALHGRTYHAMDVLDEMIRGRFKVSATSYNPIIAQLCQEEKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQM+YR C PNEGTYNAIA LCE+GMVQEAFSI QSL +KQ S +FYK VI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNAIAVLCEQGMVQEAFSIFQSLASKQSSSPNDFYKSVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
LCRKGNTYPAFQLLYEMTK GFTPDS+TYSSLIRGLC+EGML A++IF VMEE N K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFTPDSYTYSSLIRGLCLEGMLQAAMQIFIVMEESNFKPD 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
+N+N+LILG CKS RTDL+L VFE+++ KGY+ NETTYTILVEGI HE +M+LA +VL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMLIEKGYMPNETTYTILVEGIAHEGQMELAAQVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNEL 565
EL +R+V++Q VERL+MQY+L+ +
Sbjct: 541 ELHMREVVSQHVVERLIMQYNLSAI 565
BLAST of Csa4G613170 vs. TAIR10
Match:
AT1G79080.1 (AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 735.3 bits (1897), Expect = 2.8e-212
Identity = 376/577 (65.16%), Postives = 462/577 (80.07%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPN--IQKLSLNKGFSKVLASTQITISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ + S++KG ++VLASTQIT+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTLP--NWK----IGKL--DQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKT 120
FT+ +WK G D +S E L+D+F HLE +V G KP+V +TQLLYDLCK
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 CKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATY 180
+++KAI+V+E+M+ SGIIPDA++YT+LV+ LC++GNVGYAMQLV+KME++GYP+NT TY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIA 240
N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA KLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRT+DAM LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG +R+PS VTYNILI SL HGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQH 420
IARLCK+ KVDLVVKCLD+M+YR C PNEGTYNAI +LCE VQEAF IIQSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 FSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 480
T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVME--ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 540
+ S+ME EN K +N+N++ILG CK RRTDLA++VFE+MV K + NETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 IHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDLN 563
HE E++LA EVL EL+LR VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of Csa4G613170 vs. TAIR10
Match:
AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 371.3 bits (952), Expect = 1.1e-102
Identity = 192/489 (39.26%), Postives = 300/489 (61.35%), Query Frame = 1
Query: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
L Q + L + F LE MV G PD+ T L+ C+ K RKA K++E++ GSG
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
+PD +Y ++S C+ G + A+ ++D+M + TYN+++R LC G L Q+++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 228
Query: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
+LDR++Q+ P+ TY+ L+EA ++ G A KLLDE+ +G P++V+YNVL+ G+C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288
Query: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308
KEGR ++A++ ++PS G PNV+++NI+LRS+C+ GRW +A LLA+M SPS V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348
Query: 309 TYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368
T+NILI L G A+++LE+M + +P + SYNP++ CK++K+D ++ L++M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408
Query: 369 MYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNT 428
+ R C P+ TYN + T LC++G V++A I+ L +K Y VI L + G T
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468
Query: 429 YPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSL 488
A +LL EM PD+ TYSSL+ GL EG ++EAI+ F E I+ + +NS+
Sbjct: 469 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 528
Query: 489 ILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 548
+LG CKSR+TD A+D M+ +G NET+YTIL+EG+ +E A E+L EL + +
Sbjct: 529 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 588
Query: 549 INQSTVERL 556
+ +S+ E++
Sbjct: 589 MKKSSAEQV 594
BLAST of Csa4G613170 vs. TAIR10
Match:
AT3G04760.1 (AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 323.9 bits (829), Expect = 1.9e-88
Identity = 174/479 (36.33%), Postives = 271/479 (56.58%), Query Frame = 1
Query: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
LE MV KG PDV T+L+ + KA++VME++ G PD +Y L++ C+
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171
Query: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +T TYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Y+ L+EA E G DEA KL+DE++++G KP++ +YN ++ G+CKEG + A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
KG P+V+SYNILLR+L N+G+WEE L+ +M ++ P+ VTY+ILI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA C++ ++D+ ++ L+ M+ C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
ATLC+ G +A I LG Y + ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDV 504
PD TY+S+I LC EGM++EA E+ M YN ++LG CK+ R + A++V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDL 562
E MVG G NETTYT+L+EGI A E+ +L D I++ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of Csa4G613170 vs. TAIR10
Match:
AT1G12300.1 (AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 246.9 bits (629), Expect = 3.0e-65
Identity = 135/454 (29.74%), Postives = 238/454 (52.42%), Query Frame = 1
Query: 91 KGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGY 150
KG +++ + ++ C+ K+ A M +I G P+ +++ L++ LC +G V
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 151 AMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ + T N+LV GLC+ G +++ L+D++++ G PNA TY +L
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 211 AAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSP 270
K A +LL ++ + K + V Y++++ GLCK G ++A LF E+ KG +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVL 330
N+++YNIL+ CN GRW++ LL +M + +P+ VT+++LI S G+ A E+
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEE 390
+EMI P +Y +I CK+ +D + +D M+ + C+PN T+N + C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 391 GMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
+ + + + + + + Y +I C G A +L EM P+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 451 SSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEIMVG 510
L+ GLC G +A+EIF +E++ ++LD YN +I G C + + D A D+F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 511 KGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 543
KG TY I++ G+ + + A + R+++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
HSP 2 Score: 206.1 bits (523), Expect = 5.8e-53
Identity = 124/451 (27.49%), Postives = 223/451 (49.45%), Query Frame = 1
Query: 75 ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS 134
E R+++A ++ MVE G KPD+ L+ LC + K +A+ +++ M+ G P+A +
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
Y +++ +C+ G AM+L+ KMEE + Y+ ++ GLC HG+L + L + +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTE 254
KG+ N TY+ L+ D+ +KLL ++I + PN+V+++VL+ KEG+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 255 DAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILI 314
+A +L +E+ +G +P+ ++Y L+ C E ++AN ++ M P+ T+NILI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 315 GSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN 374
R + LE+ +M +YN +I C+ K+++ + +M+ R
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 375 PNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQL 434
PN TY + LC+ G ++A I + + + Y I+I +C A+ L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 435 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKL-DTENYNSLILGCCK 494
+ G P TY+ +I GLC +G L+EA +F MEE+ D YN LI
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 495 SRRTDLALDVFEIMVGKGYLANETTYTILVE 524
++ + E + G+ + +T ++++
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVID 621
HSP 3 Score: 206.1 bits (523), Expect = 5.8e-53
Identity = 123/474 (25.95%), Postives = 237/474 (50.00%), Query Frame = 1
Query: 75 ELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS 134
+++ +DA M+ P V ++L + KT + + + + M GI + +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
+ +++ CR + A + K+ + GY NT T+++L+ GLC+ G ++++L+L+DR++
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTE 254
+ G P+ T + L+ EA L+D+++ G +PN V+Y +L +CK G+T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 255 DAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILI 314
AM+L R++ + + V Y+I++ LC G + A L EM+ + + +TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 315 GSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN 374
G GR + ++L +MI+ + P +++ +I K+ K+ + +M++R
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 375 PNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQL 434
P+ TY + I C+E + +A ++ + +K + I+I C+ +L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 435 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCK 494
+M+ G D+ TY++LI+G C G LN A E+F M + + Y L+ G C
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 495 SRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 547
+ ++ AL++FE + + Y I++ G+ + ++D A ++ L L+ V
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
BLAST of Csa4G613170 vs. TAIR10
Match:
AT1G12775.1 (AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 245.7 bits (626), Expect = 6.7e-65
Identity = 130/456 (28.51%), Postives = 239/456 (52.41%), Query Frame = 1
Query: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
M KG ++ + ++ C+ K+ A M ++ G PD + L++ LC +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
V A++LVD+M E G+ T N+LV GLC++G ++ ++ L+DR+++ G PN TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
+L K A +LL ++ + K + V Y++++ GLCK+G ++A LF E+ KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHAL 327
F ++++YN L+ CN GRW++ LL +M + SP+ VT+++LI S G+ A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 328 EVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-L 387
++L+EM++ P +YN +I CK+ +++ ++ +D M+ + C+P+ T+N +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 388 CEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDS 447
C+ + + + + + + + Y ++ C+ G A +L EM PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 448 FTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEI 507
+Y L+ GLC G L +A+EIF +E++ ++LD Y +I G C + + D A D+F
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 508 MVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 542
+ KG + Y I++ + + + A + R++
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
HSP 2 Score: 235.7 bits (600), Expect = 6.9e-62
Identity = 138/491 (28.11%), Postives = 252/491 (51.32%), Query Frame = 1
Query: 77 RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136
+L+ AF + +++ G +PD LL LC C++ +A+++++ M+ G P +
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK 196
LV+ LC G V A+ L+D+M E G+ N TY ++ +C G +++LL ++ ++
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDA 256
+ +A YS +++ K+ D A L +E+ KG K ++++YN L+ G C GR +D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
+L R++ + SPNVV++++L+ S EG+ EA+ LL EM +P+T+TYN LI
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376
R E A+++++ MI P ++N +I CK ++D ++ +M R N
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 377 EGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 436
TYN + C+ G ++ A + Q + +++ YKI++ LC G A ++
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 437 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENIKLDTENYNSLILGCCKSR 496
++ K D Y +I G+C +++A ++F S+ + +KLD YN +I C+
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 497 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV-INQSTVE 556
A +F M +G+ +E TY IL+ + + + A E++ E++ + STV+
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 557 RLVMQYDLNEL 565
++ EL
Sbjct: 618 MVINMLSSGEL 628
HSP 3 Score: 208.0 bits (528), Expect = 1.5e-53
Identity = 124/481 (25.78%), Postives = 234/481 (48.65%), Query Frame = 1
Query: 68 KLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSG 127
KL ++ +DA M++ P V +L + KT + + + + M G
Sbjct: 59 KLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 128 IIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSL 187
I + + +++ CR + YA + K+ + GY +T +N+L+ GLC+ ++++L
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 188 QLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGL 247
+L+DR+++ G P T + L+ +A L+D ++ G +PN V+Y +L +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 248 CKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPST 307
CK G+T AM+L R++ + + V Y+I++ LC +G + A L EM+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 308 VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQ 367
+TYN LIG GR + ++L +MI+ + P +++ +I K+ K+ + L +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 368 MMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGN 427
MM R PN TYN+ I C+E ++EA ++ + +K + I+I C+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 428 TYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNS 487
+L EM+ G ++ TY++L++G C G L A ++F M ++ D +Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 488 LILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRD 547
L+ G C + + AL++F + + Y I++ G+ + ++D A ++ L L+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
BLAST of Csa4G613170 vs. NCBI nr
Match:
gi|778695367|ref|XP_011653982.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus])
HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
Query: 541 LQLRDVINQSTVERLVMQYDLNELPL 567
LQLRDVINQSTVERLVMQYDLNELPL
Sbjct: 541 LQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of Csa4G613170 vs. NCBI nr
Match:
gi|659087133|ref|XP_008444287.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo])
HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 542/566 (95.76%), Postives = 554/566 (97.88%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480
Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540
Query: 541 LQLRDVINQSTVERLVMQYDLNELPL 567
LQLRDVI+QST+ERLVMQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of Csa4G613170 vs. NCBI nr
Match:
gi|225462201|ref|XP_002269984.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Vitis vinifera])
HSP 1 Score: 892.9 bits (2306), Expect = 2.9e-256
Identity = 436/567 (76.90%), Postives = 503/567 (88.71%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MA L+N +SPIT+PSPE R+ CGFFS +PN+ LSLNKGFS+VLASTQITISPKD +FT
Sbjct: 1 MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNW+ GK D ++++LRLNDAF +LE+M+ KG KPD QATQL+Y+LCK+ KMRKA KVM
Sbjct: 61 LPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
E+MIGSG PD AS TFLV++LC++GNVGYAMQLV+KMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 ELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL+QSLQ+LD+ ++KGLVPN +TYSFLLEAAYKERGADEA +LLDEI+AKGGKPNLVSY
Sbjct: 181 GNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTE+AMQ FR+LPSKGFSPNVVSYNILLRSLC EGRWE+A LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
ERSPS VT+NILIGSL LHG+T+ ALEVL++M RARFK TA+SYNPIIARLCK+ KVDL
Sbjct: 301 GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYR CNPNEGTYNAIA LCEEG VQEAFSIIQSLGNKQ+ ST +FYK VI+S
Sbjct: 361 VVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLD 480
LCRKGNTYPAFQLLYEMTKYGF PDS+TYSSLIRGLC EGML+EA+EIFS+MEEN + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPD 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
+N+N+LILG CK R+TDL+L VFE+MV KGY+ NETTYTI+VEGI H++EM+LA VL+
Sbjct: 481 VDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNELPL 567
EL LR + +ST+ERLVMQYDL LP+
Sbjct: 541 ELYLRQAVGRSTLERLVMQYDLEGLPI 567
BLAST of Csa4G613170 vs. NCBI nr
Match:
gi|1009141884|ref|XP_015888425.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 892.9 bits (2306), Expect = 2.9e-256
Identity = 438/567 (77.25%), Postives = 500/567 (88.18%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MA LLN VSPI +PSPET+R+ CGFFSH+PN+ S+NKGF++VLAST ITISPKDT+FT
Sbjct: 1 MAILLNPVSPIAHPSPETSRKSCGFFSHVPNLHTFSVNKGFARVLASTPITISPKDTVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
+PNW+ GK D +SKE RLNDAF H E MVEKGQKPDV QATQLLYDLCK K +KA++VM
Sbjct: 61 VPNWRTGKNDTRSKEFRLNDAFLHFERMVEKGQKPDVAQATQLLYDLCKVNKAKKAVRVM 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMM+GS IIPDAASYTFLV+ LC++G++GYAMQLVDKMEEYGYPTNTATYNSL+RG C+
Sbjct: 121 EMMVGSCIIPDAASYTFLVNYLCKRGSIGYAMQLVDKMEEYGYPTNTATYNSLIRGTCLR 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL QSLQLLDRL QKGLVPNA+TYS LLEAAYKERG +EA KLLDEIIA GGKPNLVSY
Sbjct: 181 GNLNQSLQLLDRLKQKGLVPNAFTYSSLLEAAYKERGVNEAMKLLDEIIANGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT++A+ FR LPS GF+PNVVSYNILLR+LC EGRWEEAN+LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIHFFRNLPSMGFNPNVVSYNILLRNLCYEGRWEEANMLLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
ER+PS VTYNILIGSL+LHGR EHA V++EMIR RFKPTA+SYNPIIA LCK+ KVDL
Sbjct: 301 GERTPSIVTYNILIGSLSLHGRIEHAFGVMDEMIRRRFKPTAASYNPIIASLCKEGKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQMMYR C+PNEGTYNAIA LCEEGM+QEAFSIIQSLGNKQ ST +F K VI+S
Sbjct: 361 VVKCLDQMMYRRCSPNEGTYNAIAVLCEEGMIQEAFSIIQSLGNKQKSSTHDFSKNVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
LCRKGNTY AFQLLYEMTKYGFTPDS+TYSSL+RGLCMEGML+EA+EIFSVMEE N + +
Sbjct: 421 LCRKGNTYAAFQLLYEMTKYGFTPDSYTYSSLLRGLCMEGMLDEAMEIFSVMEENNYRPN 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
TEN+N+LILG CKS+RTDLA+DV+E+M+ KGY+ NETTY I+VEGI E EM +A VL+
Sbjct: 481 TENFNALILGFCKSQRTDLAVDVYEMMIEKGYMPNETTYIIIVEGIASEGEMGIAARVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNELPL 567
ELQ R VI+QS+VERL MQYDL +LP+
Sbjct: 541 ELQQRQVIDQSSVERLAMQYDLEDLPV 567
BLAST of Csa4G613170 vs. NCBI nr
Match:
gi|590612064|ref|XP_007022279.1| (Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao])
HSP 1 Score: 890.6 bits (2300), Expect = 1.5e-255
Identity = 431/565 (76.28%), Postives = 506/565 (89.56%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
MATLLN++SP+TNPSPETTR+ CGFF IPN+ SLNKGF++VLA+TQITISPKD++FT
Sbjct: 1 MATLLNSMSPMTNPSPETTRKTCGFFYQIPNLHSFSLNKGFTRVLATTQITISPKDSVFT 60
Query: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
LPNWK GK D KS+ELRLNDAFFH+E+MV KGQKPDV QATQLLYDLCK KM+K+I+V+
Sbjct: 61 LPNWKTGKNDTKSRELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVL 120
Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
EMM+ SGIIPDAASYTFLV+ LC++GNVG+AMQLV+KME +GYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMVNSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
GNL QSLQLLD+LIQ+GLVPNA+TYSFLLEAAYKE+G +EA KLLD+IIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT++A++ FR LP+KGF PNVVSYNILLR+LC EG+W+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCYEGQWKEANELLAEMDG 300
Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
++RSPS VTYNILIGSL LHGRTEHAL+VL+EMIR RFK TA+SYNPIIARLC+++KVDL
Sbjct: 301 EDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIRGRFKATATSYNPIIARLCQEKKVDL 360
Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
VVKCLDQM+YR C PNEGTYNA A LCE+GMVQEAFSIIQSLG+KQ + +FYK VI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNATAVLCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISS 420
Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
LCRKGNTYPAFQLLYEMTK GF PDS+TYSSLIRGLC+EGML EA+EI VMEE N + D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPD 480
Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
+N+N+LILG CKS RTDL+L VFE+++ KGY+ NETTYTILVEGI HE +++LA EVL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLK 540
Query: 541 ELQLRDVINQSTVERLVMQYDLNEL 565
EL +R+V++Q VERLVMQY+L+ +
Sbjct: 541 ELHVREVVSQHAVERLVMQYNLSAI 565
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP131_ARATH | 4.9e-211 | 65.16 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
PPR28_ARATH | 1.9e-101 | 39.26 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... | [more] |
PP213_ARATH | 3.4e-87 | 36.33 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
PPR36_ARATH | 5.3e-64 | 29.74 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
PPR39_ARATH | 1.2e-63 | 28.51 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L2W8_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G613170 PE=4 SV=1 | [more] |
E5GBB3_CUCME | 0.0e+00 | 95.76 | Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=... | [more] |
A5AJ76_VITVI | 2.0e-256 | 76.90 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00450 PE=4 SV=... | [more] |
A0A061FH66_THECC | 1.0e-255 | 76.28 | Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_032... | [more] |
A0A0D2U0G5_GOSRA | 2.3e-252 | 75.58 | Uncharacterized protein OS=Gossypium raimondii GN=B456_009G354800 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G79080.1 | 2.8e-212 | 65.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09900.1 | 1.1e-102 | 39.26 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 1.9e-88 | 36.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G12300.1 | 3.0e-65 | 29.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12775.1 | 6.7e-65 | 28.51 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |