Csa4G540130 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTTACGCTAATTCTGATAGATAATAAAACTTTAATCTGTTGAAACTTTAACTCCTACTTAAAAGAAAGACCCCATCAAAGAACGTATAAAGTTGAATAATTTTCTTCAATTTTGTCATTTCTTTTGACAATTCCCAAGGAAAAAAGAAAAAGAAAATGAGAATCAATACGGCCAACCTTCTTCTTCAACACGCACGCTAAGCCCCTAACCTTCCCCTCTCTTCTTCGCATAGCGCAAGTGAGAGCAACGCAGCTGCTCAAAGCTTGTCGTCCGTTCGCCTTCCACACTCGTCGCTCGCCACAGCCAGTAAGCCTAGTCTCTCTCTATCTCTTTATCTCTCTCCTTCGCGCCGATCCGGCAGAGTGCCTTGCGAAGACTCTCACCGCACCGCCAGCAGTCGAGCGCCGCCCTCACCCGTCACCGTCCACCCCTCTATTGACGCCGGAAGTCGCTGCAAGTCATCGGAATTTCTAGTTTTTGGGTGAGTTTCCTTGAGTTCTTAGAGTTTTTAGGAAGTATCTTGAATGCCCATTAGCTTTTGGCTTCAATTGGTCGATACCCATTACACTTGGGCTTTTATATCGAAGTTTTCAGGTGTTAAGAGTCGCAGTCATCAGGTTTGAAGCGGTTACGACCACTTTTTTTATATTAATCGGTTGTCCAAAACACTTTTAATGACTTGGTGATGGCTGGAATTGTAATCCTAATTTTTAATGTCATTATTGATCTAGGTTGAAAGTTTTTACGCCCTGTCCAGGGAAGTAAAGGTTGGTTTTTGGCGATATTGGGGTACGTGTTTGTTTTTGAAGCCCTTTGGAGTAGGTATGGATTTTCTGGAATTTGAACATCTAATACTTACTATTAAATTTGCATTGATTTTGAAATATTGGGGTACTATTAAATTTGCATTGATTTTGACCTCGTTTGGATCGTCGAGGTGATTGTTAGATTAAATCACAATTTGGTATGTTGTTTGAGTTTAAGTTGACTTGTGTTTTAGAATTAGGTCCTAAAGTTTGGAATTTGATTTGCCAATTTTGCACTGATTTTCTACTCTCTTTTTCCTCTTCTTCTTACGGTATTCTCCCTATCTTCATCGATGTGTTTCTTTTTGTAAGGACTTGTCTAATGAAAGAATAGAGTAGTTGTGTTGATTTTGTTTCCCAATGACAACAGGCCAAAAAAAAAAAAAAGAGGCTTGCCTTTTGAACTGCTGTTTGATTTGTTGCATATGTTTATCAATTGAGCCTTTCATAATCTGCATCTCTCTAGTCTCTGCTAAAAACTGTTTCATTTGTGGAACCATCAATTTTCTTGCATCTATGGTTTTATTTATCTATTAAAGAACTGTTGAAGTATAAATATGGCAAACAAGAACATTTTGTTTTGGTGAAATGAAATTGTAACCTTGGATGTTGAATGCAACAGGGTTATTTTGGTTGACCAAATGTCGGTAGGCAAAGCAATTGACCACTCAACACCCTGTAGAATGAAGAACCTAAATAATCTAGCAAAAGAACAAGATATAAGAAGGTGGCTTTGAGTTTCTGGGCCATTCTTGCGCATAATACAATGGCAAGGTGATAAAAGAAATCATAGATTTCCTTTGGAACTTATCACGAGTGTTCAAGCAAGATTGAATGAGTTTCCATAAAAGATCTGCTTTTTTGGAATATTGACCTATGCACATCATGCTGTATAAGTCTACCCTAGTATGAGAACTGAGTATGACAAAAATATAGAAATAGATTTAACAGAGAAACCTATTTTGTGAATCTTCCAAACAAAAAGTCCTTCCTATCTTTGAGTTCAACAAATGAAAGAGTTTTGGATAATCTAGCCCATTCATATGTCTGCCTCTGTAGGGTTCCTTTTGAGCCTTAGGTTTCCAAGATGCAGATTCAGAATATTGCCGATCAGCAATGATGGCCACCTTTTTGAGCTAGATAGCAAATAAATGTGGGAAATCAACTTTCAAGGGACGATTGGACTAGAAGCTGGTGTTAATTCCTTTCTCAATTTTGTAAGCAATATTCTTATAGATATTGCCCTTAACTCTACCTGTGTGTTTCTAGCTTTGTAGATGAAATGAGATTTCTCATGGAATCTCCTGATCCCTTTTGCCAAAAGGTATTTATTCTTCTGTTGAATGCCAATAATGCCAAGACCCTCTCATCAATAAGAAGAGTTACTTTGTACCATTTAATAGTTTGAGAACCAGAAATATCCTTACTGCCTGTTTGAAGGAAATTGTGAAACAATTTTTCAATCATATTTGATGCTTTGACCAGTAGAGTGAAAGAGGATAGGTAATGAATGGGAAGGTTAAAAAATGAAGCTTGTATGAGGGTATGGCGGCTAGCTTTAGAAATATAAGAGTTTCCCGAGAACATACACCTTTTTTCCACCTTTTCAACAACTGTAGCTCAAAGTCAAGAAGTGCTCCATGTCGCTAAGCAAGCTAACCCCTGTTCTTGATAAACTCTCTGTAATGGTGTTCCTCCATTTGGTAGCAACCACCCGCTGAATCGTAATTAAGGGTGGGAGGAAGTAAATTTGGATACTTTATTGATGTGAAGTCAATATTTGTTTCCAGGCTATACTGAAAATAAGTAAATCAGTAGTTGGACTTTGATGTTTCTAATTTCTTCTCCCTGGAAATGACGTGTTTGATTAGTTTGTGATTAGATGGCAGCATAATATGACATTCATAACTGCTTGTACCTGAATTTTTTCAGAGAGAGATTAAATATTATTTTATAAATTAATACAGAAAGAAAAATCATAGTAATGATTATTTTGTGTGCCTAGTGCATAACTGCATATGCATGGGAGAGCTTTTTAAAACACTAGTTTACCTCAAAAGAGGAGTGGAGGTTAATAAGATCCCATAAACTAAAAGTACTCATTTGATTTTCACCGACAGTTATATGATTTCTTTTGCAAAATGTGCCAATTGATAGGATAACAATCTTCCCATTGTTTGTTTACATCACTTATACTCGATCATTTTTTATATACTAGGTTAAACGGTTTAAGTACAGAATGCATCTTAACATCATTCCCATTCCCCTATAAATTAGCTTACAGAAATTATGAATTATTTGTTACAAGTTCGTTTTGAATTAATAAATGTGTCTGTTTCATGATAATGGTATATTGTATACGTGTTGCAAGAGACAGAGGCTTTCAACCAAATTTGATTCTTTAGAAGAAGCTTGGAAATGCTTGATAAAACCACATCAGTGTAAAAGAAAATCCATCGTGCTTGATCTGCAGTAGGAATTTTACTTCTTTAAGCACAGACCCATTCATATAATAAAGCTAATAGGTGAATGATTTTTCCTGCAAGGAAAGACATCAAATTCACAAAAAGCTCATCGGCATTGAAGAAGAAGACACAGCTAATGGAGAATAGCGAAATCCCTGAAAACGCCAATGAAAGTAATGGATTTCCTTCCTATTCATTGTATTTTTCATTTGTAGATTGTGCAACTTATTAGCCCCTTTTTGTTTTCTGTATTTCATTTTCATTGATGTTCTCTTTGTGGGTTTTTGGGTTTCAGATTGCCCGGGTCCTGAGTCGGAGTCAGCAGGGAAATCAGATGCCTGTCAAGGATGTCCCAACCAATCCATTTGTGCTACTGCACCTAAAGGCCCTGACCCAGGTTCTCTTTGTCTTGTAAATCTATTTGCTTTTTGTTTTTTGTAG ATGAGCGCAAGTGAGAGCAACGCAGCTGCTCAAAGCTTGTCGTCCGTTCGCCTTCCACACTCGTCGCTCGCCACAGCCAGTAAGCCTAGTCTCTCTCTATCTCTTTATCTCTCTCCTTCGCGCCGATCCGGCAGAGTGCCTTGCGAAGACTCTCACCGCACCGCCAGCAGTCGAGCGCCGCCCTCACCCGTCACCGTCCACCCCTCTATTGACGCCGGAAGTCGCTGCAAGTCATCGGAATTTCTAGTTTTTGGGAAAGACATCAAATTCACAAAAAGCTCATCGGCATTGAAGAAGAAGACACAGCTAATGGAGAATAGCGAAATCCCTGAAAACGCCAATGAAAATTGCCCGGGTCCTGAGTCGGAGTCAGCAGGGAAATCAGATGCCTGTCAAGGATGTCCCAACCAATCCATTTGTGCTACTGCACCTAAAGGCCCTGACCCAGGTTCTCTTTGTCTTGTAAATCTATTTGCTTTTTGTTTTTTGTAG ATGAGCGCAAGTGAGAGCAACGCAGCTGCTCAAAGCTTGTCGTCCGTTCGCCTTCCACACTCGTCGCTCGCCACAGCCAGTAAGCCTAGTCTCTCTCTATCTCTTTATCTCTCTCCTTCGCGCCGATCCGGCAGAGTGCCTTGCGAAGACTCTCACCGCACCGCCAGCAGTCGAGCGCCGCCCTCACCCGTCACCGTCCACCCCTCTATTGACGCCGGAAGTCGCTGCAAGTCATCGGAATTTCTAGTTTTTGGGAAAGACATCAAATTCACAAAAAGCTCATCGGCATTGAAGAAGAAGACACAGCTAATGGAGAATAGCGAAATCCCTGAAAACGCCAATGAAAATTGCCCGGGTCCTGAGTCGGAGTCAGCAGGGAAATCAGATGCCTGTCAAGGATGTCCCAACCAATCCATTTGTGCTACTGCACCTAAAGGCCCTGACCCAGGTTCTCTTTGTCTTGTAAATCTATTTGCTTTTTGTTTTTTGTAG MSASESNAAAQSLSSVRLPHSSLATASKPSLSLSLYLSPSRRSGRVPCEDSHRTASSRAPPSPVTVHPSIDAGSRCKSSEFLVFGKDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPGSLCLVNLFAFCFL*
BLAST of Csa4G540130 vs. Swiss-Prot
Match: NBP35_ARATH (Cytosolic Fe-S cluster assembly factor NBP35 OS=Arabidopsis thaliana GN=NBP35 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of Csa4G540130 vs. Swiss-Prot
Match: NBP35_CRYNB (Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=NBP35 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 1
BLAST of Csa4G540130 vs. Swiss-Prot
Match: NBP35_CRYNJ (Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=NBP35 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 1
BLAST of Csa4G540130 vs. Swiss-Prot
Match: NBP35_ASPTN (Cytosolic Fe-S cluster assembly factor nbp35 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=nbp35 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12 Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 1
BLAST of Csa4G540130 vs. Swiss-Prot
Match: NBP35_COCIM (Cytosolic Fe-S cluster assembly factor NBP35 OS=Coccidioides immitis (strain RS) GN=NBP35 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12 Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 1
BLAST of Csa4G540130 vs. TrEMBL
Match: A0A0A0KZC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G540130 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 3.4e-87 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa4G540130 vs. TrEMBL
Match: A0A061F9B5_THECC (Cytosolic Fe-S cluster assembly factor NBP35 OS=Theobroma cacao GN=NBP35 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18 Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 1
BLAST of Csa4G540130 vs. TrEMBL
Match: M5XPW9_PRUPE (Cytosolic Fe-S cluster assembly factor NBP35 OS=Prunus persica GN=NBP35 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18 Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 1
BLAST of Csa4G540130 vs. TrEMBL
Match: A0A126I632_PRUPE (Cytosolic Fe-S cluster assembly factor NBP35 OS=Prunus persica var. persica GN=NBP35-1 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18 Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 1
BLAST of Csa4G540130 vs. TrEMBL
Match: A0A0D2SRQ4_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G038800 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.5e-18 Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 1
BLAST of Csa4G540130 vs. TAIR10
Match: AT5G50960.1 (AT5G50960.1 nucleotide binding protein 35) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of Csa4G540130 vs. NCBI nr
Match: gi|700199690|gb|KGN54848.1| (hypothetical protein Csa_4G540130 [Cucumis sativus]) HSP 1 Score: 328.9 bits (842), Expect = 4.9e-87 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa4G540130 vs. NCBI nr
Match: gi|449453858|ref|XP_004144673.1| (PREDICTED: cytosolic Fe-S cluster assembly factor NBP35 [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 1
BLAST of Csa4G540130 vs. NCBI nr
Match: gi|659083114|ref|XP_008442190.1| (PREDICTED: cytosolic Fe-S cluster assembly factor NBP35 [Cucumis melo]) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 1
BLAST of Csa4G540130 vs. NCBI nr
Match: gi|590642704|ref|XP_007030592.1| (Nucleotide binding protein 35 [Theobroma cacao]) HSP 1 Score: 101.3 bits (251), Expect = 1.7e-18 Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 1
BLAST of Csa4G540130 vs. NCBI nr
Match: gi|596138339|ref|XP_007222379.1| (hypothetical protein PRUPE_ppa005998mg [Prunus persica]) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18 Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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