Csa4G097650.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G097650.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	WD40-repeat protein; contains IPR015943 (WD40/YVTN repeat-like-containing domain)
Location	Chr4 : 6379877 .. 6381345 (-)
Sequence length	1002

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGAGATTTTGGGTCAGTTCGGGGGATTTTCCTTATGACTTCGCACCGCCTGCCTCCTACTTTTCCATCCTCAACGCGTTCCACAATTTTTCCATTTCGTTTTTATTTTTCTGAGCAAAGCCATCGTTCGACAGTCGCCATCTCGTCGGCGTTCCGTGTACCGATCATCAGTTCGTCCTTCATTGTCTCTCTCAGTCTATTCCATCGTTCTTCGCTTTTGGAATCATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGAGGACTGAGAACATTTTCCACTGTGCCTCTACCTACTGTGCATCTACTGTCATATCCTTACCTTTTGTTTTTCAATCACGTTATATAAGCCTGATGTCTTCCTATAAGTTTAGTTTTACGTTAGTGCTAAGTTGTTACTAGGCTAATATAAATGTTGGTGCTTCTTCTGGCTAACAGACAACACATTCTATGTTAACTCGCTTGAATTCTTGAAATTCAATCAAAACTTAAGTAGGCCAC

mRNA sequence

ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Coding sequence (CDS)

ATGGAACACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGAATCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCTCTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTATCTCCATTAAAGCCAATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCCGGCGACTCTCTCCGCCTCTGGAAACTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCGTTAACTTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCTTCTGTTTCCGCTGATGGGTCGGTAAGGATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCTGATACCCCTTTGCTCAGACTGGCATGGAACAAACAGGACCTGCGGTATATGGCCACAATTCTGATGGACAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAATTGGAGAGGCATCATTCCAGTGTCAATGCTATAGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCCCTCATCTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATTTGAAATTAACCAGTTGCAGTGGTCTGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Protein sequence

MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV*

Homology

[Close]

BLAST of Csa4G097650.1 vs. Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 8.9e-152
Identity = 262/335 (78.21%), Postives = 296/335 (88.36%), Query Frame = 1


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Csa4G097650.1 vs. Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.6e-113
Identity = 205/334 (61.38%), Postives = 252/334 (75.45%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRRDKKY----RLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Csa4G097650.1 vs. Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.0e-112
Identity = 203/339 (59.88%), Postives = 251/339 (74.04%), Query Frame = 1


Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKY----RLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Csa4G097650.1 vs. Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 5.5e-93
Identity = 182/327 (55.66%), Postives = 231/327 (70.64%), Query Frame = 1


Query: 13  TYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSF 72
           TY SP  +Y ++ SS     +N   R+A+GSF+E+Y NRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  EHPYPPTKLMFNPSPLSS---LLASSGDSLRLWKLGDS--SIEPLSLLNNSKTSEFCAPL 132
           EHPYPPTK M+ P   S+   LLA++GD LRLW++G +  SI+  SLL N   SEFCAPL
Sbjct: 68  EHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTNV-ISEFCAPL 127

Query: 133 TSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFASVSA 192
           +SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FASV A
Sbjct: 128 SSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGA 187

Query: 193 DGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPS 252
           DGS+R+FD+R+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS K++ILDIR PS
Sbjct: 188 DGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPS 247

Query: 253 VPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAFE 312
           VP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A  E
Sbjct: 248 VPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNALAE 307

Query: 313 INQLQWSAAQPDWIALAFSNKMQLLKV 334
           INQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 INQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of Csa4G097650.1 vs. Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.3e-90
Identity = 179/339 (52.80%), Postives = 224/339 (66.08%), Query Frame = 1


Query: 14  YESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFE 73
           YE+P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S       +  F+
Sbjct: 13  YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FD 72

Query: 74  HPYPPTKLMFNPSPLS---SLLASSGDSLRLWKLGDSSIEPLSLLNNSKTSEFCAPLTSF 133
           HPYP TKLM+ P        LLA+SGD LR+W++G++      LLNN+K S+FCAPLTSF
Sbjct: 73  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 134 DWNEVEPKRIGTSSIDTTCTIWDIEKSVV-----------ETQFIAHDKEVYDIAWGEAR 193
           DWNEV+P  +GTSSIDTTCTIW +E   V           +TQ IAHDKEVYDIA+  A 
Sbjct: 133 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 194 ----VFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 253
               +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHH-PLLRLCWNKQDPNYLATMAMDGM 252

Query: 254 KIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGI 313
           ++VILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P  I
Sbjct: 253 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--PRAI 312

Query: 314 -DPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 EDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of Csa4G097650.1 vs. TrEMBL
Match: B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 6.7e-191
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Csa4G097650.1 vs. TrEMBL
Match: Q9M610_MALDO (TTG1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 9.8e-158
Identity = 269/332 (81.02%), Postives = 303/332 (91.27%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. TrEMBL
Match: X2EXM4_9ROSA (TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.7e-157
Identity = 268/332 (80.72%), Postives = 303/332 (91.27%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA++SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICS GDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. TrEMBL
Match: A0A059U7J8_9ROSA (Transcription factor WD40 OS=Malus hybrid cultivar PE=2 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 3.7e-157
Identity = 268/332 (80.72%), Postives = 302/332 (90.96%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AF NKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFPNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. TrEMBL
Match: E7EAX2_PYRPY (WD40 protein OS=Pyrus pyrifolia GN=ttg1 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.1e-156
Identity = 267/332 (80.42%), Postives = 302/332 (90.96%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           ++E   TYESP+PLYA+A  SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  KAENSVTYESPYPLYALAFVSPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. TAIR10
Match: AT5G24520.1 (AT5G24520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 537.7 bits (1384), Expect = 5.0e-153
Identity = 262/335 (78.21%), Postives = 296/335 (88.36%), Query Frame = 1


Query: 6   SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 65
           SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10  SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 66  ANPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKLGD--SSIEPLSLLNNS 125
             P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++EP+S+LNNS
Sbjct: 70  PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 126 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 185
           KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 186 RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 245
           RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 246 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPM 305
           ILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP VAGPNGIDPM
Sbjct: 250 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPM 309

Query: 306 SMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           S+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 310 SVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Csa4G097650.1 vs. TAIR10
Match: AT1G12910.1 (AT1G12910.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 410.6 bits (1054), Expect = 9.2e-115
Identity = 205/334 (61.38%), Postives = 252/334 (75.45%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRRDKKY----RLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Csa4G097650.1 vs. TAIR10
Match: AT3G26640.1 (AT3G26640.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-113
Identity = 203/339 (59.88%), Postives = 251/339 (74.04%), Query Frame = 1


Query: 2   EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKY----RLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  ISIKANPSLSFEHPYPPTKLMFNPSP---LSSLLASSGDSLRLWKLGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Csa4G097650.1 vs. TAIR10
Match: AT1G29260.1 (AT1G29260.1 peroxin 7)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 1


Query: 49  NNRVDIVSFDPDSISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSS 108
           N R+ ++   P +  +    S+S++       + ++ S  S L+A+ GD     K+ D++
Sbjct: 36  NGRIHVLELAPGAPGV--TESVSYDTADAVYDVCWSESHDSVLIAAIGDGSV--KIYDTA 95

Query: 109 IEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 168
           + P S    S   E    + S D+N        TSS D T  +W +++      F  H  
Sbjct: 96  LPPPSNPIRS-FQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAY 155

Query: 169 EVYDIAWGEAR--VFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRY 228
            VY   W      VFAS S D ++RI+D+R+   + II   P  D  +L   WNK D   
Sbjct: 156 CVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCI 215

Query: 229 MATILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWE 286
           +AT  +D   + + D+RS  VP+A L  H  +V  + ++P     I S   D    +W+
Sbjct: 216 LATSSVDKT-VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265

[Close]

BLAST of Csa4G097650.1 vs. NCBI nr
Match: gi|525507294|ref|NP_001267687.1| (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus])

HSP 1 Score: 674.5 bits (1739), Expect = 9.7e-191
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Csa4G097650.1 vs. NCBI nr
Match: gi|659111171|ref|XP_008455615.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 660.6 bits (1703), Expect = 1.4e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 1


Query: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Csa4G097650.1 vs. NCBI nr
Match: gi|658016927|ref|XP_008343816.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like [Malus domestica])

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-157
Identity = 269/332 (81.02%), Postives = 303/332 (91.27%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. NCBI nr
Match: gi|595597718|gb|AHM88209.1| (TTG1 protein [Malus hybrid cultivar])

HSP 1 Score: 563.5 bits (1451), Expect = 2.4e-157
Identity = 268/332 (80.72%), Postives = 303/332 (91.27%), Query Frame = 1


Query: 7   RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 66
           R+E   TYESP+PLYAMA++SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11  RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  NPSLSFEHPYPPTKLMFNPSP-----LSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKTS 126
           NP+LSF+HPYPPTKLMF+P+P      + +LASSGD LRLW++GDS++EP+ +LNNSKTS
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131 EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191 ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 306
           IRSP++PVAELERH  SVNAIAWAP+SCRHICS GDD QALIW+LP VAGPNGIDPMSMY
Sbjct: 251 IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPNGIDPMSMY 310

Query: 307 SAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           SA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 311 SAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Csa4G097650.1 vs. NCBI nr
Match: gi|645257921|ref|XP_008234637.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume])

HSP 1 Score: 562.8 bits (1449), Expect = 4.1e-157
Identity = 273/342 (79.82%), Postives = 306/342 (89.47%), Query Frame = 1


Query: 1   MEHAASRS----EFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60
           ME++A  S    E   TYESP+PLYAMA S P   + +   RIA+GSF+EEY+NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPPQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSISIKANPSLSFEHPYPPTKLMFNPSPLS-----SLLASSGDSLRLWKLGDSSIEP 120
           FDPD++S+K NP+LSF+HPYPPTKLMF+P+P S      +LASSGD LRLW++ DSS+EP
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNPNSLHKSNDVLASSGDYLRLWEVRDSSVEP 120

Query: 121 LSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVY 180
           + +LNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVY
Sbjct: 121 IQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVY 180

Query: 181 DIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 240
           DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL
Sbjct: 181 DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 240

Query: 241 MDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG 300
           MDSNK+VILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VAG
Sbjct: 241 MDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVAG 300

Query: 301 PNGIDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           PNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 PNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

The following BLAST results are available for this feature:

BLAST of Csa4G097650.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTG1_ARATH	8.9e-152	78.21	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1	[more]
LWD1_ARATH	1.6e-113	61.38	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1	[more]
LWD2_ARATH	4.0e-112	59.88	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1	[more]
DCAF7_DICDI	5.5e-93	55.66	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 ...	[more]
DCAF7_HUMAN	4.3e-90	52.80	DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1	[more]

BLAST of Csa4G097650.1 vs. TrEMBL


Match Name	E-value	Identity	Description
B7SBL6_CUCSA	6.7e-191	100.00	WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1	[more]
Q9M610_MALDO	9.8e-158	81.02	TTG1 OS=Malus domestica PE=2 SV=1	[more]
X2EXM4_9ROSA	1.7e-157	80.72	TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1	[more]
A0A059U7J8_9ROSA	3.7e-157	80.72	Transcription factor WD40 OS=Malus hybrid cultivar PE=2 SV=1	[more]
E7EAX2_PYRPY	1.1e-156	80.42	WD40 protein OS=Pyrus pyrifolia GN=ttg1 PE=2 SV=1	[more]

BLAST of Csa4G097650.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24520.1	5.0e-153	78.21	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	9.2e-115	61.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.3e-113	59.88	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G29260.1	1.3e-15	28.03	peroxin 7	[more]

BLAST of Csa4G097650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|525507294\|ref\|NP_001267687.1\|	9.7e-191	100.00	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus]	[more]
gi\|659111171\|ref\|XP_008455615.1\|	1.4e-186	97.90	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
gi\|658016927\|ref\|XP_008343816.1\|	1.4e-157	81.02	PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like [Malus domestica]	[more]
gi\|595597718\|gb\|AHM88209.1\|	2.4e-157	80.72	TTG1 protein [Malus hybrid cultivar]	[more]
gi\|645257921\|ref\|XP_008234637.1\|	4.1e-157	79.82	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0009957	epidermal cell fate specification
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0010026	trichome differentiation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G097650	Csa4G097650	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa4G097650.1	Csa4G097650.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G097650.1.utr3p1	Csa4G097650.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G097650.1.cds1	Csa4G097650.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G097650.1.utr5p1	Csa4G097650.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 163..194 score: 0.11coord: 249..284 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 65..103 score: 8.9coord: 156..194 score: 1.4E-4coord: 108..153 score: 2.0coord: 245..285 score: 1.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 252..286 score: 9.74coord: 163..203 score: 9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 64..325 score: 1.0
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 71..294 score: 13
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 38..287 score: 2.11
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 140..154 score: -coord: 272..286 scor
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 2..333 score: 1.1E