Csa3G875970 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGCCTCCATCAAGTTTGTTTGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGTATATATCTATTATGCTATACGTTTATATGATATTTATTTCATCACGTTAGGTCTTAAAACTATTGTCAAGCACACTTTGAATCGGGATGATGGAAAATGATTCAAATATGAAAGTTGAGCGTTTAAATTAAAACAAGAAATGACTGTTATAACATCTAATGACTCTCATTCGATGAGTTGTCGAACATATATATATATATAGAACTCGTTAATTTTGTGGTTTGAATGACGAGGATGATGATTATTTTCAGGAAACTGTGAATGTGTGTTGAATGACATTGCAATAAGTCAAACAACAACTGGATCTATAGTGCAAGGGAAGCAAGTGTGGAAAGCCACAATCACAAACAATTGCATTTGTGGACAATCAAGTTTGAAATTGGATTGCAATGGATTCAACACAGTTCAAGCAGTTGATCCATCCATATTGGCAGTTTCTGGGTCAGTGTGTTTGGTGAATGGTGGTCAACCGATCTTTCAATCTACACCCATCTCCTTCACATATGCTTCGGACAATGCCTTCCCTTTCAAGCCCCTCTCCTCTCAAATTTCTTGTTCTTAA ATGGTTGCCTCCATCAAGTTTGTTTGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGAAACTGTGAATGTGTGTTGAATGACATTGCAATAAGTCAAACAACAACTGGATCTATAGTGCAAGGGAAGCAAGTGTGGAAAGCCACAATCACAAACAATTGCATTTGTGGACAATCAAGTTTGAAATTGGATTGCAATGGATTCAACACAGTTCAAGCAGTTGATCCATCCATATTGGCAGTTTCTGGGTCAGTGTGTTTGGTGAATGGTGGTCAACCGATCTTTCAATCTACACCCATCTCCTTCACATATGCTTCGGACAATGCCTTCCCTTTCAAGCCCCTCTCCTCTCAAATTTCTTGTTCTTAA ATGGTTGCCTCCATCAAGTTTGTTTGTGTACTCTTCTTCTTTTGTCTCCTCTCCAAAGGAAACTGTGAATGTGTGTTGAATGACATTGCAATAAGTCAAACAACAACTGGATCTATAGTGCAAGGGAAGCAAGTGTGGAAAGCCACAATCACAAACAATTGCATTTGTGGACAATCAAGTTTGAAATTGGATTGCAATGGATTCAACACAGTTCAAGCAGTTGATCCATCCATATTGGCAGTTTCTGGGTCAGTGTGTTTGGTGAATGGTGGTCAACCGATCTTTCAATCTACACCCATCTCCTTCACATATGCTTCGGACAATGCCTTCCCTTTCAAGCCCCTCTCCTCTCAAATTTCTTGTTCTTAA MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSSLKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQISCS*
BLAST of Csa3G875970 vs. TrEMBL
Match: A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 6.8e-64 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Csa3G875970 vs. TrEMBL
Match: A0A0A0LDN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 5.4e-45 Identity = 88/122 (72.13%), Postives = 100/122 (81.97%), Query Frame = 1
BLAST of Csa3G875970 vs. TrEMBL
Match: A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 9.6e-34 Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 1
BLAST of Csa3G875970 vs. TrEMBL
Match: V4UMI7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009917mg PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-32 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of Csa3G875970 vs. TrEMBL
Match: A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-32 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of Csa3G875970 vs. TAIR10
Match: AT4G32110.1 (AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 87.4 bits (215), Expect = 6.6e-18 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1
BLAST of Csa3G875970 vs. TAIR10
Match: AT4G32105.1 (AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 85.5 bits (210), Expect = 2.5e-17 Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of Csa3G875970 vs. TAIR10
Match: AT4G32100.1 (AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of Csa3G875970 vs. NCBI nr
Match: gi|700204940|gb|KGN60073.1| (hypothetical protein Csa_3G875970 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 9.7e-64 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Csa3G875970 vs. NCBI nr
Match: gi|700204942|gb|KGN60075.1| (hypothetical protein Csa_3G875990 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 7.8e-45 Identity = 88/122 (72.13%), Postives = 100/122 (81.97%), Query Frame = 1
BLAST of Csa3G875970 vs. NCBI nr
Match: gi|659133309|ref|XP_008466664.1| (PREDICTED: uncharacterized protein LOC103504019 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Csa3G875970 vs. NCBI nr
Match: gi|700193567|gb|KGN48771.1| (hypothetical protein Csa_6G500630 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33 Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 1
BLAST of Csa3G875970 vs. NCBI nr
Match: gi|659080150|ref|XP_008440637.1| (PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo]) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32 Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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