Csa3G875410.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACTCAACCATTTCAATCTAAACATAAATGATGATCATGGAAAAACATTCCAATCCAAAATCCAAATTCATGAAATTTCTTCCCAGAGCCGCCTCTGCCGTTAATTTCCACAACCCACCCGTCAGTCCCGGTAGGGAAACTCGACCCCTCGCCGGTCGAGGATTTTCCGGTCCCATGAACTTCTCGATCATACCACGGGAAGCGCGAATTACCAAATCCAATAACTCCGGTTTCGAAACGCCGGAGCCTACGTCGCCCAAGGTGTCCTGCATCGGCCAAATCAAGCACAAGAAGAAGTTGAAGGGCATGGCTAAGACAGCTGCTGCGGCCACGGTTGAGTCCAAGAATCGGCTTCCGCCATCGAGGATTAAGAGAATTTTTACAGGTGGGAAAGTACTAGGGAGGGCAAAATCCAACGTCGCGGGGGCTGCGGCTCAGTCGGGGAAACCGCCGTTGCCGGAGAGAGCGCCGGGGCTGAATCAGATGAAGAGATTCTCGAGTGGACGTGGCGCTTTGGCGAATTTTGATTGGACAGCACAGATTGCTCCGGAGGATGAGGTGGAGGGAGAGGGGCGGAGAACGGTGTGGATTGGTGAAGAAGTTGGGCCATTTCAACCGAGAAAAGAAGTGAATATATGGAAGAGAAGAACCGTAGTTCCCCCAACACCTCTTCAACTCAACTCAACCATTGTCAAACAAAAATGATACTGTGTGTATTCTTTTCTTTTTGTAATTTTACCCCAAAAGAGAGAGGAAAATGTAAGAATATTTTAATACAAATCTAGAATGGGTTTCTAGTTAAGTTTTGT ATGATGATCATGGAAAAACATTCCAATCCAAAATCCAAATTCATGAAATTTCTTCCCAGAGCCGCCTCTGCCGTTAATTTCCACAACCCACCCGTCAGTCCCGGTAGGGAAACTCGACCCCTCGCCGGTCGAGGATTTTCCGGTCCCATGAACTTCTCGATCATACCACGGGAAGCGCGAATTACCAAATCCAATAACTCCGGTTTCGAAACGCCGGAGCCTACGTCGCCCAAGGTGTCCTGCATCGGCCAAATCAAGCACAAGAAGAAGTTGAAGGGCATGGCTAAGACAGCTGCTGCGGCCACGGTTGAGTCCAAGAATCGGCTTCCGCCATCGAGGATTAAGAGAATTTTTACAGGTGGGAAAGTACTAGGGAGGGCAAAATCCAACGTCGCGGGGGCTGCGGCTCAGTCGGGGAAACCGCCGTTGCCGGAGAGAGCGCCGGGGCTGAATCAGATGAAGAGATTCTCGAGTGGACGTGGCGCTTTGGCGAATTTTGATTGGACAGCACAGATTGCTCCGGAGGATGAGGTGGAGGGAGAGGGGCGGAGAACGGTGTGGATTGGTGAAGAAGTTGGGCCATTTCAACCGAGAAAAGAAGTGAATATATGGAAGAGAAGAACCGTAGTTCCCCCAACACCTCTTCAACTCAACTCAACCATTGTCAAACAAAAATGA ATGATGATCATGGAAAAACATTCCAATCCAAAATCCAAATTCATGAAATTTCTTCCCAGAGCCGCCTCTGCCGTTAATTTCCACAACCCACCCGTCAGTCCCGGTAGGGAAACTCGACCCCTCGCCGGTCGAGGATTTTCCGGTCCCATGAACTTCTCGATCATACCACGGGAAGCGCGAATTACCAAATCCAATAACTCCGGTTTCGAAACGCCGGAGCCTACGTCGCCCAAGGTGTCCTGCATCGGCCAAATCAAGCACAAGAAGAAGTTGAAGGGCATGGCTAAGACAGCTGCTGCGGCCACGGTTGAGTCCAAGAATCGGCTTCCGCCATCGAGGATTAAGAGAATTTTTACAGGTGGGAAAGTACTAGGGAGGGCAAAATCCAACGTCGCGGGGGCTGCGGCTCAGTCGGGGAAACCGCCGTTGCCGGAGAGAGCGCCGGGGCTGAATCAGATGAAGAGATTCTCGAGTGGACGTGGCGCTTTGGCGAATTTTGATTGGACAGCACAGATTGCTCCGGAGGATGAGGTGGAGGGAGAGGGGCGGAGAACGGTGTGGATTGGTGAAGAAGTTGGGCCATTTCAACCGAGAAAAGAAGTGAATATATGGAAGAGAAGAACCGTAGTTCCCCCAACACCTCTTCAACTCAACTCAACCATTGTCAAACAAAAATGA MMIMEKHSNPKSKFMKFLPRAASAVNFHNPPVSPGRETRPLAGRGFSGPMNFSIIPREARITKSNNSGFETPEPTSPKVSCIGQIKHKKKLKGMAKTAAAATVESKNRLPPSRIKRIFTGGKVLGRAKSNVAGAAAQSGKPPLPERAPGLNQMKRFSSGRGALANFDWTAQIAPEDEVEGEGRRTVWIGEEVGPFQPRKEVNIWKRRTVVPPTPLQLNSTIVKQK*
BLAST of Csa3G875410.1 vs. Swiss-Prot
Match: Y1607_ARATH (Uncharacterized protein At1g76070 OS=Arabidopsis thaliana GN=At1g76070 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.0e-23 Identity = 84/260 (32.31%), Postives = 117/260 (45.00%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TrEMBL
Match: A0A0A0LDM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875410 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TrEMBL
Match: A0A061FEK4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034301 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44 Identity = 116/254 (45.67%), Postives = 153/254 (60.24%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TrEMBL
Match: B9R8F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1599530 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.5e-42 Identity = 114/269 (42.38%), Postives = 150/269 (55.76%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TrEMBL
Match: A0A067KL66_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08163 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41 Identity = 112/252 (44.44%), Postives = 139/252 (55.16%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TrEMBL
Match: F6H0D8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00840 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.6e-40 Identity = 115/258 (44.57%), Postives = 143/258 (55.43%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TAIR10
Match: AT1G76070.1 (AT1G76070.1 unknown protein) HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24 Identity = 84/260 (32.31%), Postives = 117/260 (45.00%), Query Frame = 1
BLAST of Csa3G875410.1 vs. TAIR10
Match: AT1G20310.1 (AT1G20310.1 unknown protein) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24 Identity = 91/250 (36.40%), Postives = 121/250 (48.40%), Query Frame = 1
BLAST of Csa3G875410.1 vs. NCBI nr
Match: gi|778686855|ref|XP_011652460.1| (PREDICTED: uncharacterized protein At1g76070 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 2.8e-125 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Csa3G875410.1 vs. NCBI nr
Match: gi|659132915|ref|XP_008466454.1| (PREDICTED: uncharacterized protein At1g76070 [Cucumis melo]) HSP 1 Score: 416.0 bits (1068), Expect = 4.2e-113 Identity = 211/225 (93.78%), Postives = 217/225 (96.44%), Query Frame = 1
BLAST of Csa3G875410.1 vs. NCBI nr
Match: gi|590594655|ref|XP_007017912.1| (Uncharacterized protein TCM_034301 [Theobroma cacao]) HSP 1 Score: 186.4 bits (472), Expect = 5.4e-44 Identity = 116/254 (45.67%), Postives = 153/254 (60.24%), Query Frame = 1
BLAST of Csa3G875410.1 vs. NCBI nr
Match: gi|1009108931|ref|XP_015887408.1| (PREDICTED: uncharacterized protein At1g76070 [Ziziphus jujuba]) HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43 Identity = 119/256 (46.48%), Postives = 148/256 (57.81%), Query Frame = 1
BLAST of Csa3G875410.1 vs. NCBI nr
Match: gi|255539066|ref|XP_002510598.1| (PREDICTED: uncharacterized protein At1g76070 [Ricinus communis]) HSP 1 Score: 179.9 bits (455), Expect = 5.1e-42 Identity = 114/269 (42.38%), Postives = 150/269 (55.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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