Csa3G823090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G823090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32430805 .. 32431832 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTGTACGTATAATTCTTACCTTTTCTTTTCTCGCTTTGCCACCTTGTTCTCTCATTTTCTCTATGCAATGTTACCTTCGTAAATCTTGTTTTCTACTGATTGAGAACAAATTGACTGAAATAGAACTACTGGGTTTTTATCCTTATCTGTCGATGTTTTGTCTTTTGTTGAGAAATTGGAGTATATGTCGACGTTTTAGTTTGAATTTTGTGCAATTAACTTAAATTTTATTACTTTCTAATCTAGCTTTACAACACAGTGTTCTTCTTCCTGTAACAATATTGATTGATTGCTAATGGGGGTATTTACAATTTGAAAGCATTAGATAAACCCCACTTGAAATCACTCGTCTAAGTTGGTTCTTAGAGTTCACACCATTTCATTGTTAAGATATTGGATTTAGAAAGCCATCTATTCATTGGAGCTTTACCACACGCTTGAAGTTTTCCCCCCTGCTTATCTTTTTTGTATACAAAGCCTGACAATCTCTATTGTAATGCTTTTATTTCTCTCCTACTTCAAAATACTACACTTCTTCGGTTGTTCTTCTCGTTTTATAAAATACCAATTTCTTGATGCACTGCGTGTGTTGCTTCCCTGATGCCTGCACTTTTTTTTTTCACCTTGCTCTTAGGTTTTTATGTTTGAGGATATTCAGTAATGGACCATCTCTTTCCTTCTCAAAACTACTTGGTTTTCTATCTCCATCTCTCTCATGGTTTGTGAGATTTGTGTATATAGAAAGATTTGGAATCTTCTTTGGCATTGCCTCAATATGATTTTTTATTATTGAGTATGAGATTCTCAAATTCTTGTTTGTTTTCAGTGA

mRNA sequence

ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTTGA

Coding sequence (CDS)

ATGGGTGAGTCGAGAGATATCGAAGTTGATATATTGACAGCAGTTTCAACGGCCAAAAAGCGCGGACATATATTCTATAATTTCTCTATTCTATTCTCATTGCTCATCCAGATTCGGATACTCTCCCATGGCGGCTTCTCTCTTCTAGTCTTATCAATCTCACTGCACCCTCACACCAGTTTCTTGCATTTCTGTGTTTTTTGA

Protein sequence

MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTSFLHFCVF*
Homology
[Close]
BLAST of Csa3G823090 vs. TrEMBL
Match: A0A0A0LBZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823090 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60
          MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS
Sbjct: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60

Query: 61 FLHFCVF 68
          FLHFCVF
Sbjct: 61 FLHFCVF 67

[Close]
BLAST of Csa3G823090 vs. NCBI nr
Match: gi|700204377|gb|KGN59510.1| (hypothetical protein Csa_3G823090 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60
          MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS
Sbjct: 1  MGESRDIEVDILTAVSTAKKRGHIFYNFSILFSLLIQIRILSHGGFSLLVLSISLHPHTS 60

Query: 61 FLHFCVF 68
          FLHFCVF
Sbjct: 61 FLHFCVF 67

The following BLAST results are available for this feature:
BLAST of Csa3G823090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBZ9_CUCSA3.0e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823090 PE=4 SV=1[more]
BLAST of Csa3G823090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204377|gb|KGN59510.1|4.3e-29100.00hypothetical protein Csa_3G823090 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G823090.1Csa3G823090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G823090Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G823090Cucumber (Gy14) v2cgybcuB110
Csa3G823090Melon (DHL92) v3.6.1cumedB207
Csa3G823090Silver-seed gourdcarcuB0345
Csa3G823090Silver-seed gourdcarcuB0467
Csa3G823090Watermelon (97103) v2cuwmbB186
Csa3G823090Wax gourdcuwgoB220
Csa3G823090Wax gourdcuwgoB241
Csa3G823090Cucumber (Gy14) v1cgycuB478
Csa3G823090Cucurbita maxima (Rimu)cmacuB239
Csa3G823090Cucurbita maxima (Rimu)cmacuB831
Csa3G823090Cucurbita moschata (Rifu)cmocuB226
Csa3G823090Cucurbita moschata (Rifu)cmocuB819
Csa3G823090Melon (DHL92) v3.5.1cumeB223
Csa3G823090Watermelon (Charleston Gray)cuwcgB194
Csa3G823090Watermelon (97103) v1cuwmB198
Csa3G823090Cucurbita pepo (Zucchini)cpecuB597