Csa3G302130 (gene) Cucumber (Chinese Long) v2

NameCsa3G302130
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 17138268 .. 17138507 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTGAAGAAACACAGAGAATCAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATGGTGAAACGGAGCTTAGAGACAAAGAGACAGACAGTGATTTGGGTTCACCACTTTAGTGGAAACTTTGGATTTGTGTTTTACTTTTCTTCTTTGCTTTGCTTTGTTGTTTTGGTTTTTTGTTTACAGAGAGAGCAGTCTTCTTCTCTTCTCTCTTTCTTCATGGCATCTCTCCATTTTAA

mRNA sequence

ATGGGTATTGAAGAAACACAGAGAATCAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATGGTGAAACGGAGCTTAGAGACAAAGAGACAGACAGTGATTTGGAGAGAGCAGTCTTCTTCTCTTCTCTCTTTCTTCATGGCATCTCTCCATTTTAA

Coding sequence (CDS)

ATGGGTATTGAAGAAACACAGAGAATCAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATGGTGAAACGGAGCTTAGAGACAAAGAGACAGACAGTGATTTGGAGAGAGCAGTCTTCTTCTCTTCTCTCTTTCTTCATGGCATCTCTCCATTTTAA

Protein sequence

MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF*
BLAST of Csa3G302130 vs. TrEMBL
Match: A0A0A0L7K4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G302130 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1

Query: 1  MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF 52
          MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF
Sbjct: 1  MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF 51

BLAST of Csa3G302130 vs. NCBI nr
Match: gi|700202655|gb|KGN57788.1| (hypothetical protein Csa_3G302130 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1

Query: 1  MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF 52
          MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF
Sbjct: 1  MGIEETQRIRGRKEGRKEGNGETELRDKETDSDLERAVFFSSLFLHGISPF 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7K4_CUCSA2.5e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G302130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202655|gb|KGN57788.1|3.6e-20100.00hypothetical protein Csa_3G302130 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU144608cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G302130.1Csa3G302130.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU144608CU144608transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None