Csa3G036420 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTTTTCTTTCAATTTTGCCGAAAACTGAAGAACCACTCATTTCATTGTCCGTTGGGTTAATGGTCAGCAACGACTGAGCATCGTCTTCCCCAACCTGAAGTTGTCGTAGCAAAAATAATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGGTATGTCTCAAGCTGAACTAGCCATCACTTCTTTAGTTCTGGGTTTGAGTTTGTTGTACCATTTTAGTTGGGGTACTATAGAAGCATCACTATTGTTTTTGTGTTGATAAAATGATCGTTGCTTTGATTTACTGAATATTGTGGTTTTGTTCCAGCTGAAGTCGATATAGGTTCTCTTGTCTACGTCCAAATTGTCTAAATTTTCTGTATGTAGACTAGCTCACGTTCATTGAAGCTGCTTGCAGATTCTTTGATCAAGTGTTATCCAATGGGTGTTGGAAAAATTGAAACTTTTGGATTTTTTTCGGTTGTTAACTTTTCTTCGAAGTCCGATACACTTAACCTCTATCAAATCGCCTTGACCCTTGACTATCATTTTCCTGCCTGATTTTGAGTCTCTTAATTGCACTCACTAAAGATGTTTGGGATCATGCTAATGCTTGTTGGAATTTGGCATTAAGAGGAATCTTAATGAAAAGGAGTTTGAAGATTGTCTCTCTTTAAACTCTTGATTGACAATTTCTGGCTGAGTGATATTGAGGATGGCAGGTTTTTGAATATAGATTCCCTCTGAACTTTCTTCTTTGCAATTTCCATTGAGAGATAATTGAGTGGTTGCCGTTCCCATCCTTCGGTTTTCTATCTGTAGGTATGCAATTTGCCTGTTTGAAGAAGAAAAATCTTTACTTGCGCTTCCTCTTTCTAAGGAACTCTCTCTAGTCCATTCATATATAAATGTATAGTTTAGATCCTAGAATTTTAGTAGAAGTATAGGTTTTTGTGTTTGAGTGGAGATGGGAAATTCACTAGGACTCTACAATTTTGCTTTTGGAATTTTACCATGGAAACTGGAAAAGCGAAGTGCATTGGATACAGTCAAAAAGAAGAATCCCAACATGTATATCTCCTTCTTGATATGGTATGTAGAAATAGTATTGAAACATTGAACCATCTGGTGTTGGATTCCTCATTTTATGTGAAAATTTAAGCTGTCCTTTGTGAAGTTTGCCACCTAAAATGGTGTATACGACATAAGGTGGTTGATTTTCTGGCTTTCCTTCAGCAACTTATTTAATTACTAAATTCTTAACTTCCAGAAAGTTAACCTCCCCTTCCCGTACTTTTTCCTGAACTACCTAAAATAGCTAATCCCTTGCTTGTAATTTCTTCATAAAACTTCTCTACCCACATTAAACCTTACTCCTTTTCCTTTCATTGCAGAAGAACATCAGTCAAGTGTTCAAATAATTTATTTGTTTTCTCATTCTTTATAGATTTATTTACTATATCAAATTTGTATTTGAAGTTCGGGCTGGGATTATTTTGTTAATGTTGACAAAGCACCAAAAGTCTTTGGCTAGTATGTCCTTAAATGGAAAAAGTTAAACAAATTCCTGTACTCTTAAAAGAAAAGGTTCCCTCATAGCAATTGCTAAGATGGTGAATGTGATATGATTACTCTCAATCAATATCTTTGTTACTAGTGTGACTTTTCTTTTCCTTTCCTTTCCTTCAGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGGTTAGTTTATTTTCTTTGTTCTGATCGGTGTTATTTCTGCTTTAGAGAGCTGTTTTCATTATGAGGCATCATTTCTGTAAATGATAGTGCAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGTTTGTTACTCAAATTTTCTGTTCCATATCTTTCCTCTTCTCCACTAGATGATATTATTTTGAAAGCTCTAAACTCCAAAAATATTTTCTTTCTGCCTTTCTTTCAAAACCATACAGTGGTTGAAGTGTTCACAAATCTTTCACCATGATTGGATATTACTCCTCTGTTTCTGTCTCTATCTTGACATGAATTTTGCTTCCTGCTTCTGAACAGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGTGAACTTCTGTTCTCATCATCTATTTTTTATTTTTCCTCCCATGTTTCTTCTACCAAAGAAAACTTCGTAAACTTTTCTTCCTTTTTTCAGGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGTACTTTTCCTTCTCATACGTCATAAGATCCTTGTCCTCTTGTCTATCAAATGGAGAATATATAAAAAATAAAATAGTATGTGATCATTTCTTCTATAGTAGATTCAACATTCTACCGCAGTTTCCTAACTGAATATAAATTTCCAATGAATGAGCCTTTCTTCCATCTGAAAATCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGTGAGATCTTTCAACTTCCATGGTCACTTGATTTCAAAATGTTTATGTAGCTCCCTTGACTTATTTTATTGTGGGGTATACTTTTTGTATTTGTGTAAAGGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAATAGCCATCTTGCCAACTGTAAAGTTCATAATATTACAACTTCGTACTTCCCATTCCCAATATTTTCTCACAAAGGTTACTAACTTGTTCCTATCTTGTTTCTTTGATTTAGACTTTGCCGCTTGCTCTTTCAACCCAGGAGAATAATACAAAAATCAAAAAGTAATACTATGATTCTCTAGTGATTTGCTTCCTTCACAGGCGATTTCTGGAAATTTACTAGAAATGGATATAGGACAACAAATTTTCTTTACTAGATTGGCGCATGATATATTTGAAGCACCAGCTTAGATTAAATTTTATAGAACCTCTTTACGGATGCAATGACACACTGTATCTCGTTTCGTTAATGTATGTCGAACTAATATCAATTCAGTTATAGTTTCTTTTTAGATGCCATGCTCATACGTAAGTTGGTCCATTTCCATTAACTATGATACGAAATAAAGTAATTTTACCAGGAAGTGTAGTGTAGTTATGTTAGTTGTAT ATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAA ATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAA MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDSPGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD*
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_SALSA (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar GN=ict1 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.9e-24 Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 1
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_MOUSE (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus GN=Ict1 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.4e-24 Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_HUMAN (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens GN=ICT1 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.4e-24 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_AILME (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca GN=ICT1 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22 Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 1
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_BOVIN (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus GN=ICT1 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21 Identity = 54/135 (40.00%), Postives = 86/135 (63.70%), Query Frame = 1
BLAST of Csa3G036420 vs. TrEMBL
Match: A0A0A0L715_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036420 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Csa3G036420 vs. TrEMBL
Match: M5WAJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011147mg PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 3.7e-87 Identity = 177/232 (76.29%), Postives = 194/232 (83.62%), Query Frame = 1
BLAST of Csa3G036420 vs. TrEMBL
Match: A0A067K023_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20751 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.6e-84 Identity = 170/233 (72.96%), Postives = 190/233 (81.55%), Query Frame = 1
BLAST of Csa3G036420 vs. TrEMBL
Match: A0A061G5K1_THECC (Class I peptide chain release factor OS=Theobroma cacao GN=TCM_016077 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.5e-83 Identity = 169/233 (72.53%), Postives = 192/233 (82.40%), Query Frame = 1
BLAST of Csa3G036420 vs. TrEMBL
Match: D7SX50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0241g00090 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.3e-83 Identity = 166/232 (71.55%), Postives = 190/232 (81.90%), Query Frame = 1
BLAST of Csa3G036420 vs. TAIR10
Match: AT1G62850.2 (AT1G62850.2 Class I peptide chain release factor) HSP 1 Score: 295.8 bits (756), Expect = 2.3e-80 Identity = 168/238 (70.59%), Postives = 185/238 (77.73%), Query Frame = 1
BLAST of Csa3G036420 vs. NCBI nr
Match: gi|778675536|ref|XP_004147947.2| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 2.9e-125 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Csa3G036420 vs. NCBI nr
Match: gi|659096067|ref|XP_008448909.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis melo]) HSP 1 Score: 438.3 bits (1126), Expect = 8.1e-120 Identity = 222/232 (95.69%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of Csa3G036420 vs. NCBI nr
Match: gi|645266521|ref|XP_008238649.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Prunus mume]) HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87 Identity = 178/232 (76.72%), Postives = 195/232 (84.05%), Query Frame = 1
BLAST of Csa3G036420 vs. NCBI nr
Match: gi|595848685|ref|XP_007209578.1| (hypothetical protein PRUPE_ppa011147mg [Prunus persica]) HSP 1 Score: 329.3 bits (843), Expect = 5.3e-87 Identity = 177/232 (76.29%), Postives = 194/232 (83.62%), Query Frame = 1
BLAST of Csa3G036420 vs. NCBI nr
Match: gi|658020002|ref|XP_008345374.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Malus domestica]) HSP 1 Score: 325.9 bits (834), Expect = 5.9e-86 Identity = 175/232 (75.43%), Postives = 191/232 (82.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following transcribed_cluster feature(s) are associated with this gene:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |