Csa3G036420 (gene) Cucumber (Chinese Long) v2

NameCsa3G036420
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPeptidyl-tRNA hydrolase ICT1; contains IPR000352 (Peptide chain release factor class I/class II)
LocationChr3 : 2543000 .. 2546500 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTTTCTTTCAATTTTGCCGAAAACTGAAGAACCACTCATTTCATTGTCCGTTGGGTTAATGGTCAGCAACGACTGAGCATCGTCTTCCCCAACCTGAAGTTGTCGTAGCAAAAATAATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGGTATGTCTCAAGCTGAACTAGCCATCACTTCTTTAGTTCTGGGTTTGAGTTTGTTGTACCATTTTAGTTGGGGTACTATAGAAGCATCACTATTGTTTTTGTGTTGATAAAATGATCGTTGCTTTGATTTACTGAATATTGTGGTTTTGTTCCAGCTGAAGTCGATATAGGTTCTCTTGTCTACGTCCAAATTGTCTAAATTTTCTGTATGTAGACTAGCTCACGTTCATTGAAGCTGCTTGCAGATTCTTTGATCAAGTGTTATCCAATGGGTGTTGGAAAAATTGAAACTTTTGGATTTTTTTCGGTTGTTAACTTTTCTTCGAAGTCCGATACACTTAACCTCTATCAAATCGCCTTGACCCTTGACTATCATTTTCCTGCCTGATTTTGAGTCTCTTAATTGCACTCACTAAAGATGTTTGGGATCATGCTAATGCTTGTTGGAATTTGGCATTAAGAGGAATCTTAATGAAAAGGAGTTTGAAGATTGTCTCTCTTTAAACTCTTGATTGACAATTTCTGGCTGAGTGATATTGAGGATGGCAGGTTTTTGAATATAGATTCCCTCTGAACTTTCTTCTTTGCAATTTCCATTGAGAGATAATTGAGTGGTTGCCGTTCCCATCCTTCGGTTTTCTATCTGTAGGTATGCAATTTGCCTGTTTGAAGAAGAAAAATCTTTACTTGCGCTTCCTCTTTCTAAGGAACTCTCTCTAGTCCATTCATATATAAATGTATAGTTTAGATCCTAGAATTTTAGTAGAAGTATAGGTTTTTGTGTTTGAGTGGAGATGGGAAATTCACTAGGACTCTACAATTTTGCTTTTGGAATTTTACCATGGAAACTGGAAAAGCGAAGTGCATTGGATACAGTCAAAAAGAAGAATCCCAACATGTATATCTCCTTCTTGATATGGTATGTAGAAATAGTATTGAAACATTGAACCATCTGGTGTTGGATTCCTCATTTTATGTGAAAATTTAAGCTGTCCTTTGTGAAGTTTGCCACCTAAAATGGTGTATACGACATAAGGTGGTTGATTTTCTGGCTTTCCTTCAGCAACTTATTTAATTACTAAATTCTTAACTTCCAGAAAGTTAACCTCCCCTTCCCGTACTTTTTCCTGAACTACCTAAAATAGCTAATCCCTTGCTTGTAATTTCTTCATAAAACTTCTCTACCCACATTAAACCTTACTCCTTTTCCTTTCATTGCAGAAGAACATCAGTCAAGTGTTCAAATAATTTATTTGTTTTCTCATTCTTTATAGATTTATTTACTATATCAAATTTGTATTTGAAGTTCGGGCTGGGATTATTTTGTTAATGTTGACAAAGCACCAAAAGTCTTTGGCTAGTATGTCCTTAAATGGAAAAAGTTAAACAAATTCCTGTACTCTTAAAAGAAAAGGTTCCCTCATAGCAATTGCTAAGATGGTGAATGTGATATGATTACTCTCAATCAATATCTTTGTTACTAGTGTGACTTTTCTTTTCCTTTCCTTTCCTTCAGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGGTTAGTTTATTTTCTTTGTTCTGATCGGTGTTATTTCTGCTTTAGAGAGCTGTTTTCATTATGAGGCATCATTTCTGTAAATGATAGTGCAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGTTTGTTACTCAAATTTTCTGTTCCATATCTTTCCTCTTCTCCACTAGATGATATTATTTTGAAAGCTCTAAACTCCAAAAATATTTTCTTTCTGCCTTTCTTTCAAAACCATACAGTGGTTGAAGTGTTCACAAATCTTTCACCATGATTGGATATTACTCCTCTGTTTCTGTCTCTATCTTGACATGAATTTTGCTTCCTGCTTCTGAACAGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGTGAACTTCTGTTCTCATCATCTATTTTTTATTTTTCCTCCCATGTTTCTTCTACCAAAGAAAACTTCGTAAACTTTTCTTCCTTTTTTCAGGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGTACTTTTCCTTCTCATACGTCATAAGATCCTTGTCCTCTTGTCTATCAAATGGAGAATATATAAAAAATAAAATAGTATGTGATCATTTCTTCTATAGTAGATTCAACATTCTACCGCAGTTTCCTAACTGAATATAAATTTCCAATGAATGAGCCTTTCTTCCATCTGAAAATCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGTGAGATCTTTCAACTTCCATGGTCACTTGATTTCAAAATGTTTATGTAGCTCCCTTGACTTATTTTATTGTGGGGTATACTTTTTGTATTTGTGTAAAGGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAATAGCCATCTTGCCAACTGTAAAGTTCATAATATTACAACTTCGTACTTCCCATTCCCAATATTTTCTCACAAAGGTTACTAACTTGTTCCTATCTTGTTTCTTTGATTTAGACTTTGCCGCTTGCTCTTTCAACCCAGGAGAATAATACAAAAATCAAAAAGTAATACTATGATTCTCTAGTGATTTGCTTCCTTCACAGGCGATTTCTGGAAATTTACTAGAAATGGATATAGGACAACAAATTTTCTTTACTAGATTGGCGCATGATATATTTGAAGCACCAGCTTAGATTAAATTTTATAGAACCTCTTTACGGATGCAATGACACACTGTATCTCGTTTCGTTAATGTATGTCGAACTAATATCAATTCAGTTATAGTTTCTTTTTAGATGCCATGCTCATACGTAAGTTGGTCCATTTCCATTAACTATGATACGAAATAAAGTAATTTTACCAGGAAGTGTAGTGTAGTTATGTTAGTTGTAT

mRNA sequence

ATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAA

Coding sequence (CDS)

ATGGCGGTCATTAGAACCACCACAAACATAATCCTCAGAGAAATTCTTCACTCCCAACCCTATTTTTCTCTATCGCCACCCTCTATCTTCCCTAAACTTTTGCACCATCCCAATGCCACTTTGCGATTCCGGCTTCGTGACATCAGTTTCGGTCGTGTCCTATGCGCCGCTTCAGACTCCCCCGGTTCCGGTGGCAAAGTGTCTTCCCGGATGTCGCAGATGCAGCAACTGTTGCTAGAGGCGGAGGAGCGCGCTCTATTGGCTGACACCGAACCCGCCCCCAAAATCACTCTCGACCATGTCATTGTGAATTTTGCAAGAAGTGGTGGCCCCGGAGGTCAGAATGTTAACAAAGTGAACACGAAGGTTGACATGCGCTTCAATGTTAAAGAGGCGTATTGGCTAAGCGAGAGAATCAGAGAAAAGATTCTGCAAACGGAGAAAAATCGGATCAACAAGGATGGAGAACTTGTAATCTCATCCACAAAAACTAGAACACAGAAGGGTAATATTGAAGATGCCTTGGAGAAACTTCAGGCTATAATTGATGCTGCTTCTTATGTCCCGCCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGCTGGCGGCTATTGGGGAACAAAGACGCCTAAAAAGCAAGAAGGTCCATTCTGATAAGAAGGCATTTCGAAGGAGTCGAAACAGTTGGGATTAA

Protein sequence

MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDSPGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD*
BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_SALSA (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar GN=ict1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-24
Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 1

Query: 96  ITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDG 155
           I +D + V+++RS GPGGQ+VNKV+TK ++RF+V  A W+ E +R+KI+   KNRINK G
Sbjct: 57  IPVDRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKIILNNKNRINKAG 116

Query: 156 ELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSK 215
           EL+++S ++R+Q+ N+ D ++K+  II  A+  P  PS E     A       + RLK K
Sbjct: 117 ELLVTSEQSRSQQRNMGDCIQKISDIIAKATEKPHEPSAEDIALRASRLEKRNKERLKQK 176

Query: 216 KVHSDKKAFRR 227
           K+HS  K  RR
Sbjct: 177 KLHSAVKQTRR 187

BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_MOUSE (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus GN=Ict1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.4e-24
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1

Query: 96  ITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDG 155
           I LD + +++ RS GPGGQNVNKVN+K ++RF++  A W+ E +R+KI  T KN+INK G
Sbjct: 72  IPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAG 131

Query: 156 ELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE----QKKKIAKLAAIGEQRR 215
           ELV++S  +R Q  N+ + L+K++ +I  AS VP  PS+E    Q+ +I K+     + R
Sbjct: 132 ELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRIEKM----NRER 191

Query: 216 LKSKKVHSDKKAFRR 227
           L+ K+++S  K  RR
Sbjct: 192 LRQKRLNSALKTSRR 202

BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_HUMAN (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens GN=ICT1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.4e-24
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1

Query: 96  ITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDG 155
           I LD + +++ RS GPGGQNVNKVN+K ++RF++  A W++E +R+KI  T KN+IN+ G
Sbjct: 72  IPLDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLG 131

Query: 156 ELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSK 215
           EL+++S  +R Q  N+ D L+K++ +I  AS  P  P++E  K          + RL+ K
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIENMNRERLRQK 191

Query: 216 KVHSDKKAFRR 227
           ++HS  K  RR
Sbjct: 192 RIHSAVKTSRR 202

BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_AILME (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca GN=ICT1 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 1

Query: 96  ITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDG 155
           I LD + +++ RS GPGGQNVNKVN+K ++RF++  A W++E +R+K+    KN+IN+ G
Sbjct: 72  IPLDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKMAIMHKNKINRSG 131

Query: 156 ELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSK 215
           EL+++S  +R Q  N+ D L+K++ +I  AS  P  PS+E             + RL+ K
Sbjct: 132 ELILTSECSRYQFRNLADCLQKIRDMIAEASQTPKEPSKEDAALHRIRIENMNRERLRKK 191

Query: 216 KVHSDKKAFRR 227
           ++HS  K  RR
Sbjct: 192 RIHSAIKTGRR 202

BLAST of Csa3G036420 vs. Swiss-Prot
Match: ICT1_BOVIN (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus GN=ICT1 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 54/135 (40.00%), Postives = 86/135 (63.70%), Query Frame = 1

Query: 96  ITLDHVIVNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDG 155
           I +D + +++ RS GPGGQNVNKVN+K ++RF++  A W++E +R+K+  T KN+IN+ G
Sbjct: 72  IPVDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAG 131

Query: 156 ELVISSTKTRTQKGNIEDALEKLQAIIDAASYVPPPPSEE----QKKKIAKLAAIGEQRR 215
           EL+++S  +R Q  N+ D L+K++ +I  AS     PS+E    QK +I  +     + R
Sbjct: 132 ELILTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLRIENM----NRER 191

Query: 216 LKSKKVHSDKKAFRR 227
           L+ K+++S  K  RR
Sbjct: 192 LRKKRINSAIKTSRR 202

BLAST of Csa3G036420 vs. TrEMBL
Match: A0A0A0L715_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036420 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS
Sbjct: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
           PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN
Sbjct: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 232

BLAST of Csa3G036420 vs. TrEMBL
Match: M5WAJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011147mg PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.7e-87
Identity = 177/232 (76.29%), Postives = 194/232 (83.62%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAV+RTTTN+IL  IL  QPY S  PPSI   L+   N  +R        G V CAAS+S
Sbjct: 1   MAVLRTTTNMILTHIL--QPYLSF-PPSIRTTLIRSSNGGIRI-------GSVRCAASNS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
              G KVS+R+SQ+ QLL  AEERAL ADT+P PKITLDHV V+FARSGGPGGQNVNKVN
Sbjct: 61  GSGGNKVSARLSQVNQLLQAAEERALSADTQPPPKITLDHVTVSFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFN+++AYWLSE IRE+ILQ EKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNLQKAYWLSEWIRERILQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAK+AAIGEQ+RLKSKKV SDKKAFRRSR+SWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRRSRDSWD 222

BLAST of Csa3G036420 vs. TrEMBL
Match: A0A067K023_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20751 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.6e-84
Identity = 170/233 (72.96%), Postives = 190/233 (81.55%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKL-LHHPNATLRFRLRDISFGRVLCAASD 60
           MAVIR TTN+IL+E+   +  FS S  S  P   L  P   L    R+ SF R+ CAA++
Sbjct: 1   MAVIRITTNMILKEMFTHRLPFSYSSISSSPSFRLTLPITALELTRREFSFSRIRCAAAN 60

Query: 61  SPGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKV 120
                 KVS+R+SQ+QQLL EAEERA  A  EP PKIT+DHV V+FARSGGPGGQNVNKV
Sbjct: 61  DK----KVSARLSQVQQLLQEAEERASSAGNEPPPKITIDHVTVSFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQ 180
           NTKVDMRFNVK+AYWLSER+RE+I+Q EKNRINKDGE+VISSTKTRTQKGNIEDAL KLQ
Sbjct: 121 NTKVDMRFNVKDAYWLSERVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALTKLQ 180

Query: 181 AIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           AIIDAASYVPPPPSEEQKKKIAKLAAIGEQ+RLKSKK  SDKKAFRRSR+SWD
Sbjct: 181 AIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKALSDKKAFRRSRDSWD 229

BLAST of Csa3G036420 vs. TrEMBL
Match: A0A061G5K1_THECC (Class I peptide chain release factor OS=Theobroma cacao GN=TCM_016077 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.5e-83
Identity = 169/233 (72.53%), Postives = 192/233 (82.40%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFR-LRDISFGRVLCAASD 60
           MAVIRT+ N+IL+EIL+  P  S+S  S    +L     T+R    R ISF R+ CAASD
Sbjct: 1   MAVIRTSANMILKEILYHSPLSSISLSSSARAVLPGFCGTIRVTPSRGISFSRIRCAASD 60

Query: 61  SPGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKV 120
           +     KVS+R+SQ+QQLL EAEERA  A  EP P+ITLDHV V+FARSGGPGGQNVNKV
Sbjct: 61  ASAER-KVSARLSQVQQLLQEAEERASSAGNEPTPQITLDHVTVSFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQ 180
           NTKVDMRFNVK AYWLS+RIRE+I+Q EKNRINKDGE+VISSTKTRTQKGNI+DAL KLQ
Sbjct: 121 NTKVDMRFNVKNAYWLSDRIRERIMQLEKNRINKDGEIVISSTKTRTQKGNIDDALAKLQ 180

Query: 181 AIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
            IIDAA+YVPPPPSEEQKKKIAK+AAIGEQ+RLKSKK  SDKKAFRRSR+SWD
Sbjct: 181 TIIDAAAYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD 232

BLAST of Csa3G036420 vs. TrEMBL
Match: D7SX50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0241g00090 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.3e-83
Identity = 166/232 (71.55%), Postives = 190/232 (81.90%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MA IR TTN+I++EI H     SL    +F  +L + +       R IS+ R+ CAA+DS
Sbjct: 1   MATIRCTTNMIVKEIFHVS--LSLRSERMFQMVLPNFSVYCGTVNRGISYSRIRCAAADS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
              G KVS+R+SQ+QQLL EAEER+L    EP PKITLDHV V+FARSGGPGGQNVNKVN
Sbjct: 61  GDGGRKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNVK AYWLS+R+RE+I+Q EKNRINKDGE+VISSTKTRTQKGNIEDAL KLQA
Sbjct: 121 TKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAKLAAIGEQ+RL++KKV S KKAFRRSR+SWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKVLSQKKAFRRSRDSWD 230

BLAST of Csa3G036420 vs. TAIR10
Match: AT1G62850.2 (AT1G62850.2 Class I peptide chain release factor)

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-80
Identity = 168/238 (70.59%), Postives = 185/238 (77.73%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYF---SLSPPSIFPKLLHHPNAT-LRFRLRDISFGRVLCA 60
           MA IRT TN+ILRE +H        S S  S+ P L   P  + +    R +S   V CA
Sbjct: 1   MAAIRTMTNMILREFIHHPLLLHSSSKSCQSLLPCLRLTPLISPIHSNSRLVS---VRCA 60

Query: 61  ASDSPGSGG--KVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQ 120
           AS S GSGG  KVSSR+SQ+QQ+L EAEERA  A  EP P+ITLD+V +NFARSGGPGGQ
Sbjct: 61  ASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGNEPTPQITLDNVTLNFARSGGPGGQ 120

Query: 121 NVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDA 180
           NVNK+NTKVDMRFNVK AYWLS+RIREKIL TEKNRINKDGELVISSTKTRTQKGNI+DA
Sbjct: 121 NVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISSTKTRTQKGNIDDA 180

Query: 181 LEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           LEKLQAIIDAASYVPPPPSEEQKKKI KLAA  + +RLKSKKV SDKK+ RRSR S+D
Sbjct: 181 LEKLQAIIDAASYVPPPPSEEQKKKIVKLAAKADNKRLKSKKVLSDKKSARRSRGSYD 235

BLAST of Csa3G036420 vs. NCBI nr
Match: gi|778675536|ref|XP_004147947.2| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 2.9e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS
Sbjct: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
           PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN
Sbjct: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 232

BLAST of Csa3G036420 vs. NCBI nr
Match: gi|659096067|ref|XP_008448909.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 8.1e-120
Identity = 222/232 (95.69%), Postives = 229/232 (98.71%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAVIRTT+NIILREILHSQPYFSLSPPSIFPK LH+PNATL FRLRDISFGRVLCAASDS
Sbjct: 1   MAVIRTTSNIILREILHSQPYFSLSPPSIFPKPLHNPNATLPFRLRDISFGRVLCAASDS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
           PG+GGKVSSR+SQMQQLLLEAEERAL AD+EPAPKITLDHVIVNFARSGGPGGQNVNKVN
Sbjct: 61  PGTGGKVSSRLSQMQQLLLEAEERALSADSEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNVKEAYWLS+RIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNVKEAYWLSDRIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAKLAAIGEQ+RLKSKKVHSDKKAFRRSRNSWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKVHSDKKAFRRSRNSWD 232

BLAST of Csa3G036420 vs. NCBI nr
Match: gi|645266521|ref|XP_008238649.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Prunus mume])

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 178/232 (76.72%), Postives = 195/232 (84.05%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MA++RTTTN+ILR IL  QPY S  PPSI   LL   N  +R        G V CAAS+S
Sbjct: 1   MALLRTTTNMILRHIL--QPYLSF-PPSIRTTLLRSSNGGIRI-------GSVRCAASNS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
              G KVS+R+SQ+ QLL  AEERAL ADT+P PKITLDHV V+FARSGGPGGQNVNKVN
Sbjct: 61  GSGGNKVSARLSQVNQLLQAAEERALSADTQPPPKITLDHVTVSFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNV++AYWLSE IRE+ILQ EKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNVQKAYWLSEWIRERILQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAK+AAIGEQ+RLKSKKV SDKK+FRRSR+SWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKSFRRSRDSWD 222

BLAST of Csa3G036420 vs. NCBI nr
Match: gi|595848685|ref|XP_007209578.1| (hypothetical protein PRUPE_ppa011147mg [Prunus persica])

HSP 1 Score: 329.3 bits (843), Expect = 5.3e-87
Identity = 177/232 (76.29%), Postives = 194/232 (83.62%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAV+RTTTN+IL  IL  QPY S  PPSI   L+   N  +R        G V CAAS+S
Sbjct: 1   MAVLRTTTNMILTHIL--QPYLSF-PPSIRTTLIRSSNGGIRI-------GSVRCAASNS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
              G KVS+R+SQ+ QLL  AEERAL ADT+P PKITLDHV V+FARSGGPGGQNVNKVN
Sbjct: 61  GSGGNKVSARLSQVNQLLQAAEERALSADTQPPPKITLDHVTVSFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFN+++AYWLSE IRE+ILQ EKNRINKDGELVISSTKTRTQKGNIEDALEKLQA
Sbjct: 121 TKVDMRFNLQKAYWLSEWIRERILQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAK+AAIGEQ+RLKSKKV SDKKAFRRSR+SWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRRSRDSWD 222

BLAST of Csa3G036420 vs. NCBI nr
Match: gi|658020002|ref|XP_008345374.1| (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Malus domestica])

HSP 1 Score: 325.9 bits (834), Expect = 5.9e-86
Identity = 175/232 (75.43%), Postives = 191/232 (82.33%), Query Frame = 1

Query: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFPKLLHHPNATLRFRLRDISFGRVLCAASDS 60
           MAV+RTTTN+ILR I      F  S P+I   +L   N      +  I  GRV CAASDS
Sbjct: 1   MAVLRTTTNMILRHICRPSLSFPSSIPTI---VLRSSNGGTGIGI-GIGIGRVRCAASDS 60

Query: 61  PGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNKVN 120
            GSG KVS+R+SQ+ QLL  AEERAL AD  P PKITLDHV V+FARSGGPGGQNVNKVN
Sbjct: 61  GGSGNKVSARLSQVNQLLQAAEERALSADKHPPPKITLDHVTVSFARSGGPGGQNVNKVN 120

Query: 121 TKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKLQA 180
           TKVDMRFNV++AYWLSE +RE+ILQ EKNRINKDGELVISSTKTRTQKGNIEDALEK QA
Sbjct: 121 TKVDMRFNVEKAYWLSEWVRERILQMEKNRINKDGELVISSTKTRTQKGNIEDALEKFQA 180

Query: 181 IIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 233
           IIDAASYVPPPPSEEQKKKIAK+AAIGEQ+RLKSKKV SDKKAFRRSR+SWD
Sbjct: 181 IIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRRSRDSWD 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ICT1_SALSA4.9e-2444.27Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar GN=ict1 PE=2 SV=1[more]
ICT1_MOUSE6.4e-2443.70Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus GN=Ict1 PE=1 SV=1[more]
ICT1_HUMAN8.4e-2441.98Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens GN=ICT1 PE=1 SV=1[more]
ICT1_AILME2.7e-2240.46Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca GN=ICT1 PE... [more]
ICT1_BOVIN1.7e-2140.00Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus GN=ICT1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L715_CUCSA2.0e-125100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036420 PE=4 SV=1[more]
M5WAJ8_PRUPE3.7e-8776.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011147mg PE=4 SV=1[more]
A0A067K023_JATCU8.6e-8472.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20751 PE=4 SV=1[more]
A0A061G5K1_THECC2.5e-8372.53Class I peptide chain release factor OS=Theobroma cacao GN=TCM_016077 PE=4 SV=1[more]
D7SX50_VITVI3.3e-8371.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0241g00090 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G62850.22.3e-8070.59 Class I peptide chain release factor[more]
Match NameE-valueIdentityDescription
gi|778675536|ref|XP_004147947.2|2.9e-125100.00PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis sativus][more]
gi|659096067|ref|XP_008448909.1|8.1e-12095.69PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucumis melo][more]
gi|645266521|ref|XP_008238649.1|1.4e-8776.72PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Prunus mume][more]
gi|595848685|ref|XP_007209578.1|5.3e-8776.29hypothetical protein PRUPE_ppa011147mg [Prunus persica][more]
gi|658020002|ref|XP_008345374.1|5.9e-8675.43PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I_II
IPR000352Pep_chain_release_fac_I_II
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0006415translational termination
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006415 translational termination
biological_process GO:0070126 mitochondrial translational termination
biological_process GO:0072344 rescue of stalled ribosome
cellular_component GO:0005840 ribosome
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003747 translation release factor activity
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
molecular_function GO:0016150 translation release factor activity, codon nonspecific
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU123936cucumber EST collection version 3.0transcribed_cluster
CU160055cucumber EST collection version 3.0transcribed_cluster

The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160055CU160055transcribed_cluster
CU123936CU123936transcribed_cluster


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G036420.2Csa3G036420.2mRNA
Csa3G036420.1Csa3G036420.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class I/class IIPFAMPF00472RF-1coord: 95..224
score: 2.8
IPR000352Peptide chain release factor class I/class IIPROSITEPS00745RF_PROK_Icoord: 107..123
scor
NoneNo IPR availableGENE3DG3DSA:3.30.160.200coord: 94..189
score: 5.8
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 64..227
score: 4.8
NoneNo IPR availableunknownSSF110916Peptidyl-tRNA hydrolase domain-likecoord: 94..186
score: 1.14

The following gene(s) are paralogous to this gene:

None