Csa2G258730 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAAGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAAGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAAGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS*
BLAST of Csa2G258730 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24 Identity = 56/86 (65.12%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Csa2G258730 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.8e-24 Identity = 56/85 (65.88%), Postives = 63/85 (74.12%), Query Frame = 1
BLAST of Csa2G258730 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.8e-24 Identity = 55/87 (63.22%), Postives = 64/87 (73.56%), Query Frame = 1
BLAST of Csa2G258730 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Csa2G258730 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 1
BLAST of Csa2G258730 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 7.1e-48 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of Csa2G258730 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 8.7e-46 Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1
BLAST of Csa2G258730 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 7.9e-39 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1
BLAST of Csa2G258730 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 4.3e-37 Identity = 72/97 (74.23%), Postives = 92/97 (94.85%), Query Frame = 1
BLAST of Csa2G258730 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 9.6e-37 Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1
BLAST of Csa2G258730 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 118.6 bits (296), Expect = 2.1e-27 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of Csa2G258730 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25 Identity = 56/86 (65.12%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Csa2G258730 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25 Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1
BLAST of Csa2G258730 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25 Identity = 55/87 (63.22%), Postives = 64/87 (73.56%), Query Frame = 1
BLAST of Csa2G258730 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 1
BLAST of Csa2G258730 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 1.0e-47 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of Csa2G258730 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 195.7 bits (496), Expect = 3.9e-47 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of Csa2G258730 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 1.2e-45 Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1
BLAST of Csa2G258730 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1
BLAST of Csa2G258730 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 165.2 bits (417), Expect = 5.6e-38 Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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