Csa1G270920 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGTACCTCGTGCTGAATCTAAGCTTCGAGTTTTCTCATTCAAAATACAGTTCAGCTCTCAGGTTCATCGCCTTACCTGCCACAGGCGTACATATACAAATATACATGGAGATAATTTGTTAAATAACCAGTTGATTCAATAGCATAAGCTGAAGAGTTACAGTAAACTTAATTATATCAACACATCACTTGTGGGCTTGAAAGTTGTAGAAGGTCTTGGTGGAAATCAATATTAATTGAGGAAATGATATTAAATGGATTTGAATACAGGACCCTCTACTCCAATAGCATGTTAAATCACCACCCAAGGCCAGGCTGAAAGTGTAAACTGATGGGTTTCGGTGAATTTAGTTATATCATTACTTTAGCATAATCATTGACCAACCCTCTTTAATTGTTATTGCAGGTTGCGGACCTCAAAAAAAGCTTGAATTTTGTTAACTCTGCTGCAGAAGAGGTAATTTCTGCCCATGATTCTATGACATGGATTTGGAATCTCTTATATCTTTTTAAATACTCTTATTTCAGATAAAAAGTTCAGTGAAGTTGAAGAGAATCATGCAGACAATACTATCTCTTGGAAATGCCTTAAACCAGGGAACAGCAAGGGGTTAGTTGATGTTGCATCTATAATTTCTCTGAATTCAGTCAATTGCAGCAATTCATTTACCATCATGAAGACAGTACATGAATTTATCAGAATATTTTGAATTTCTTGTTTTATAATCATAAAATATTTGACTTCCAGAAGAACCTTGTTTCTTAATCTTAACTCCTTTTCTTCTTTTGCTTCCTATAAACTTCTTTCAAAATAATATCTTTAATTTGTGTGTTACATTAGGTTGAGTTTGCTCTCTTTCCCTTCTCCCTCCCTCTCTTGTGGAAAGATTATCACTTTCATCCTAACTAAAATATCTCTTTTGTAATAGTCTCATTGACTTCATCTACTCATGGTTGTTGTCTCTTCTTAGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACACTAATGCATTATCTTTGCAAGGTGCAACTTGTTTTATCTATTTCCTTGTGAGCATGATCTATATTTTGTTGGTTTACAACTTTATATTGACTATCACCTGTCGAAGCGTATAACACTATACAGAATTTTAAGTATTGTCTACTAACAATATGTATCTTACTTTCTTACCTCATTTTCTTGTCTTTGTAAAAGTTGCTGTGACACTCTTACTGTCTTACTACACACATTAGAAACTTTCTACTATTGTAAAGTATCTCACTTTTTAACTTCATTTTCTCGTATTTGTAGAAGTTGCTGTGACACTCTTACTGTCTTACAAAATATACATTAGAAACTGTCTGCTATTGTTATATATATCACTTTTGAACCTCATTTTCTTGTCTTTGTAAAAGTTGCTGTGACACTTTACTGTCTTACTAAATACACACATTATAAACTGCCTGCTATTGTTATCTATCTCACTTTTTAAGTAGGAAGATAACTTGTGGCCAGAAATGAGAGAGAGAGATGGGAAAAGAAAAGACTGAAGAAAGGAAAGAAAAAGATGATTTCAATGGACATAGACACCTTCTGTAAAACAATAAAAATGGACAATAACAGCCCCAAAAATCAGGAACAGAGGGGCGTGAGATCAGTTGAGAGATGGTTGTCGGAATTCAAAACTATGGTGATGCCTGAAAATTTCAAATTTACCATTGGTAGTCAAAATTCATAGCTGGTTATAAACTGAGGAAGACAATAAAATAGTTTAAATGGTTTCATGTCGTCGACCTCACGCTGAATTTCTTGGTTCTTACTTTAGAACCAGTAGATGGATATTGGAGAGAAATAGGCCTCTTGTGTGCTAAAACTTCCTTGCATTAAGTATAGTAGTGTATTTCTGGTCTATTTTCTTTATCTTCATCTCAAGTTTAGGTACTCTGTTTTCTTTGAACGGTGCAGTGTGGTCTTCTAAAACTATTTTTCTGAGTTTATTATTTATTGATAAGTGTAGATACTTGCTGACAAACTGCCAGAAGTTTTGGATTTTTCTAAAGATCTTGCAAACTTGGAGCCTGCATCAAAGGTATTATCTCTTTTAGTTGGGTTTGGAGTTGTATGTGTATGTGTGCGGAGGTTGCTTCGTGGACTGAGACAGGCTCGGTTTCTCCCCAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATTAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCAATATCCAATAATTTCAGAATGGTATTAAAGCTTACTGATTTAGCGTACACATTTCCCCCACTGTGAAGCTAATATTCATAGTTGTAAACTATCAGCGTCTCTTATTTTCTTGGGATTTAGGGAAATGGTCTTTAATGAGTTTATATGAAGAATTTATCCAAATGAGAGTAACTTTCTGAAGTCTCATTTCTCTTGGTTTTCTTTATAATGCAACATGGCCTCGTATTCACTTTTATAGGTGGTTTTGGCTAAGTTTTGTTCATCTTTTAATTTTCTTTGATATTCTCTTTCTTTGCTGTGCATATATCTTAATTGATCAAACTGTATCCTCAAAGCCCCAAGCCCTAGTCGTAGTTTTCTAATGTGACAAACTGAATCCTTTTCATCTATTTTCTTCTTTTGAAAATAATTCTGCCTATATGACATAGATTTGCACGTACTCTTAGTTGTCTGGTTTAATAAAAAAACAATCACATACTAGAAAAATATAAATTGCCAAAACCCAAAGATTTATATTCCTTGAGCTGGAAGCTTCCGCTGTCATTTGGCAATAATTTGTGTTTTAGAAATAATATTTACTGGTGCTCTTTTGACTTCATTTCCCTCCTCCCCCTCTGTTGATTCAGGTTCTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGCGAACTTTAGCTTCTCTGTACTCTACTGTGGTAGGTGCTGCTTCTCTTGGCATGTATGACTTTGAGCCTTTAGTTGGATTAGGTTATTACTTATGTGGAATTTGATAAATTGCAGGGTAGAAATGTAGATTCTTTGATTCTTTATTTCGGTGAAGATCCAGCTCGCTGCCCCTTTGAACAAGGTATTTGTTCACTATGAGTAAAATAACAAGTATAGGGGTTGTTAACCGGGCGACGGTGAACAGCATTAGCAAGTAGCAACAATTTGAACTCCTTTCAGTATCATTGTTGAACTAACTTTTTACCCCTAAATCATACTGCAGTTATGTCAACCTTATGCAACTTCGTGAGAATGTTTAACCGAGCCCATGAGGAAAACTGCAAGCAGATTGAGCTTGAAATGAAGAAAGCAACTGAAGGTGAAAAATCAAAGACGGGGCACTTGCACAAGAGGACAAGGACCAAACAGTTGTCAAACTCCCAGATCGAGATTGGCAATGTCAAGTAAGATAGCTTGTCGTGTTCCTTCAAGTAAGCCCTCTGAGATCTACAGACATCCAACAAAAGCAATAAGCTTTTAGTGCAAAGATTATCTACTTGTTGATGTTGAGAGAGGAGTGTACCACATACCACATAATGACAACTTAATTTGCCTTCATGAGGTAACATTCTTAACCCGGTTCCATGGAGCTTTCGTCTATCAACGTCCCACTTCATTCTCTCAATGTAGTTACCACATATTAATTCATATCCTTATGTTGCTGGCAGATCAAGTTGTTCAATGTGCTCAACAGGTTGCTTGAATCGAAATTGAACATATTCTTTTGTGTACATAATTGTAGCAAAATAATACAGGGGATAGAAGAAAGTCACCTTTCAAGTTTGCTCTATAATTTGAAGGTCCCCTGGTATTCTTTTGTATGGGAAATTTTTCATCCAAATGTGTATTTAGCTTTACCATTTAAAGAAAATTTTGTTGTGTTAATCTTATTTTCTCCATAGTTTCTTCCC ATGCAAGTACCTCGTGCTGAATCTAAGCTTCGAGTTTTCTCATTCAAAATACAGTTCAGCTCTCAGGTTGCGGACCTCAAAAAAAGCTTGAATTTTGTTAACTCTGCTGCAGAAGAGATAAAAAGTTCAGTGAAGTTGAAGAGAATCATGCAGACAATACTATCTCTTGGAAATGCCTTAAACCAGGGAACAGCAAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACACTAATGCATTATCTTTGCAAGATACTTGCTGACAAACTGCCAGAAGTTTTGGATTTTTCTAAAGATCTTGCAAACTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATTAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCAATATCCAATAATTTCAGAATGGTTCTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGCGAACTTTAGCTTCTCTGTACTCTACTGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTCGGTGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTCGTGAGAATGTTTAACCGAGCCCATGAGGAAAACTGCAAGCAGATTGAGCTTGAAATGAAGAAAGCAACTGAAGGTGAAAAATCAAAGACGGGGCACTTGCACAAGAGGACAAGGACCAAACAGTTGTCAAACTCCCAGATCGAGATTGGCAATGTCAAGTAA ATGCAAGTACCTCGTGCTGAATCTAAGCTTCGAGTTTTCTCATTCAAAATACAGTTCAGCTCTCAGGTTGCGGACCTCAAAAAAAGCTTGAATTTTGTTAACTCTGCTGCAGAAGAGATAAAAAGTTCAGTGAAGTTGAAGAGAATCATGCAGACAATACTATCTCTTGGAAATGCCTTAAACCAGGGAACAGCAAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACACTAATGCATTATCTTTGCAAGATACTTGCTGACAAACTGCCAGAAGTTTTGGATTTTTCTAAAGATCTTGCAAACTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAGGAGATGCAAGCAATTAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCAATATCCAATAATTTCAGAATGGTTCTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGCGAACTTTAGCTTCTCTGTACTCTACTGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTCGGTGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTCGTGAGAATGTTTAACCGAGCCCATGAGGAAAACTGCAAGCAGATTGAGCTTGAAATGAAGAAAGCAACTGAAGGTGAAAAATCAAAGACGGGGCACTTGCACAAGAGGACAAGGACCAAACAGTTGTCAAACTCCCAGATCGAGATTGGCAATGTCAAGTAA MQVPRAESKLRVFSFKIQFSSQVADLKKSLNFVNSAAEEIKSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFSKDLANLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRMVLKEFLRFAEAEVRTLASLYSTVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNRAHEENCKQIELEMKKATEGEKSKTGHLHKRTRTKQLSNSQIEIGNVK*
BLAST of Csa1G270920 vs. Swiss-Prot
Match: FH13_ARATH (Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=3) HSP 1 Score: 382.1 bits (980), Expect = 5.0e-105 Identity = 195/263 (74.14%), Postives = 230/263 (87.45%), Query Frame = 1
BLAST of Csa1G270920 vs. Swiss-Prot
Match: FH6_ORYSJ (Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2) HSP 1 Score: 365.2 bits (936), Expect = 6.3e-100 Identity = 191/268 (71.27%), Postives = 222/268 (82.84%), Query Frame = 1
BLAST of Csa1G270920 vs. Swiss-Prot
Match: FH18_ARATH (Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2) HSP 1 Score: 354.0 bits (907), Expect = 1.5e-96 Identity = 182/248 (73.39%), Postives = 209/248 (84.27%), Query Frame = 1
BLAST of Csa1G270920 vs. Swiss-Prot
Match: FH7_ORYSJ (Formin-like protein 7 OS=Oryza sativa subsp. japonica GN=FH7 PE=3 SV=2) HSP 1 Score: 344.7 bits (883), Expect = 8.8e-94 Identity = 178/244 (72.95%), Postives = 204/244 (83.61%), Query Frame = 1
BLAST of Csa1G270920 vs. Swiss-Prot
Match: FH17_ARATH (Formin-like protein 17 OS=Arabidopsis thaliana GN=FH17 PE=3 SV=2) HSP 1 Score: 337.8 bits (865), Expect = 1.1e-91 Identity = 174/248 (70.16%), Postives = 202/248 (81.45%), Query Frame = 1
BLAST of Csa1G270920 vs. TrEMBL
Match: A0A0A0LWN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G270920 PE=4 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 5.5e-143 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G270920 vs. TrEMBL
Match: A0A061GR12_THECC (Formin-like protein OS=Theobroma cacao GN=TCM_037068 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.5e-111 Identity = 212/267 (79.40%), Postives = 236/267 (88.39%), Query Frame = 1
BLAST of Csa1G270920 vs. TrEMBL
Match: V4SGF9_9ROSI (Formin-like protein OS=Citrus clementina GN=CICLE_v10027690mg PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 2.8e-110 Identity = 207/267 (77.53%), Postives = 236/267 (88.39%), Query Frame = 1
BLAST of Csa1G270920 vs. TrEMBL
Match: A0A0D2QZ77_GOSRA (Formin-like protein (Fragment) OS=Gossypium raimondii GN=B456_010G1126002 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.8e-109 Identity = 209/266 (78.57%), Postives = 234/266 (87.97%), Query Frame = 1
BLAST of Csa1G270920 vs. TrEMBL
Match: A0A0D2U5H2_GOSRA (Formin-like protein OS=Gossypium raimondii GN=B456_010G1126002 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.8e-109 Identity = 209/266 (78.57%), Postives = 234/266 (87.97%), Query Frame = 1
BLAST of Csa1G270920 vs. TAIR10
Match: AT5G58160.1 (AT5G58160.1 actin binding) HSP 1 Score: 367.5 bits (942), Expect = 7.2e-102 Identity = 195/290 (67.24%), Postives = 230/290 (79.31%), Query Frame = 1
BLAST of Csa1G270920 vs. TAIR10
Match: AT2G25050.2 (AT2G25050.2 Actin-binding FH2 (Formin Homology) protein) HSP 1 Score: 340.5 bits (872), Expect = 9.4e-94 Identity = 182/272 (66.91%), Postives = 209/272 (76.84%), Query Frame = 1
BLAST of Csa1G270920 vs. TAIR10
Match: AT5G07740.1 (AT5G07740.1 actin binding) HSP 1 Score: 322.4 bits (825), Expect = 2.6e-88 Identity = 166/253 (65.61%), Postives = 199/253 (78.66%), Query Frame = 1
BLAST of Csa1G270920 vs. TAIR10
Match: AT1G31810.1 (AT1G31810.1 Formin Homology 14) HSP 1 Score: 320.5 bits (820), Expect = 1.0e-87 Identity = 166/247 (67.21%), Postives = 196/247 (79.35%), Query Frame = 1
BLAST of Csa1G270920 vs. TAIR10
Match: AT3G32400.1 (AT3G32400.1 Actin-binding FH2/DRF autoregulatory protein) HSP 1 Score: 299.3 bits (765), Expect = 2.4e-81 Identity = 164/256 (64.06%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of Csa1G270920 vs. NCBI nr
Match: gi|778660297|ref|XP_011655992.1| (PREDICTED: formin-like protein 17 [Cucumis sativus]) HSP 1 Score: 515.0 bits (1325), Expect = 7.9e-143 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G270920 vs. NCBI nr
Match: gi|659086307|ref|XP_008443863.1| (PREDICTED: formin-like protein 13 isoform X1 [Cucumis melo]) HSP 1 Score: 511.9 bits (1317), Expect = 6.7e-142 Identity = 265/267 (99.25%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G270920 vs. NCBI nr
Match: gi|659086309|ref|XP_008443865.1| (PREDICTED: formin-like protein 13 isoform X2 [Cucumis melo]) HSP 1 Score: 511.9 bits (1317), Expect = 6.7e-142 Identity = 265/267 (99.25%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G270920 vs. NCBI nr
Match: gi|595812969|ref|XP_007203503.1| (hypothetical protein PRUPE_ppa024740mg [Prunus persica]) HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-113 Identity = 216/265 (81.51%), Postives = 239/265 (90.19%), Query Frame = 1
BLAST of Csa1G270920 vs. NCBI nr
Match: gi|223527271|gb|EEF29427.1| (actin binding protein, putative [Ricinus communis]) HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-113 Identity = 212/267 (79.40%), Postives = 241/267 (90.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |