Csa1G201780 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAGGGCTAATTTTGTGGAATTGTAAAAGGTAACCTACACACCCGCCGCTTGGATTTGCCGCGAAAATTAGGAAGAACATCACCTTTGTTAATTACTGGTACCTGCCTAACCCTAGCCATTTTTCTTCCCTCCATTCCCCTTTCATCTTCCGCGTCTCAGGTAATCCCAAGTTTCGATTCAAGGAAATGGCGGAAGCCCATGATAGAACCCAAGTAGAACGCAACCAAAATCCTAAAAAGCACAGGAAGCATGCTTTTCCCTATGGCAATTACCGAAATTACTATGGCTACCGGGTATTTCTCCTCCCCTATTCTTCCCCACTTCCCCTACCCTTTCTGCTTCTTAAGACAAGTATTCTTCATCATTTCCGGCTTCTGGTTGACACTCCAACTCATTTTAGATCTTTGTTTTTTTTCAGTTCATCTCTGTTTTTTCCAACTTCAATGCTGTTATGATTTTTTATTCGGCCGGCAGAATGTTCATAACCTTCCCGGTAGTTGGGTTTTCTTTTTTTTCTTTTGTGTTGCAGGTGGGTCAAAAATTGGTTGAAGATCCTCGTTTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGGTGCAATAATGGGATAGTTACCATCCAGATAGGTACCAATACTTCCATCTCAGTATTTACATGTAAAGAAAAAAAAAATATTGATATATCATTGTCATTTGCCGTACTTCTAATAATAGTATATGCTTGGAAGGCATACGTATGGAGAGCTTCAAACTGTCTTTCCTTTTCAGTGCCTATTTCTCATTATCGTTGAAGATTCTGGAATTTGTTTTCCTCAAATACTAGAGTTATTTACTTATGTGGATAATTTTCTTATTGCAGCTAGAAAGTTTAATTGCCGGAGTATTCTTGGTGTTGATATTGACTCTGGTAAGATTTGCACTTTGAACTTCTCAGCTCCCATTGTAGATCCTCTTCTTAATTTTACAAAGTATATAGAGGCAGTTTTGTGAATGGCCCTTTTCTTTGGAGGTCTAAGCCTTAATCAATGATGCATTTTACAATAACTATTTTAGGCACTTACTAGTCATGTAAAATGTAGCTTGAGATGGTTGGATGTTGATTTATTGTTTTGACTCTATTAGTAGGGAGCATCAATGAAGCTGTTTCTTCTTTAATATCTTTAATCCATATCATGCTGGAGAGCCTCTTAGTTACTTAATGGGTGGGAAATGATAAAGCTCATGAACTGAAATATTATTTTATGCATTGAAGGAGGAAAATTTTCAGTCCTAGAAGATTTTAATCATTGTTGCACATAGTGCATACTGACTTTAAACTGCCCAGTATTTGCCTGAAGAAGCTTGTGCGTCTAGAACATATTTCTTGGAAATTTCATTGTTTGTTGAGTTTCTTGGATCATAGTGACTTCATCATTATGAAGTCTATCTTTTACTAGTACCTTTAGCAATCATTACATCACAATTTGGTTGTTATTTTGGGATAAAATTGATCTCAAAGGTGAAATACTTCTAAAAAATCAAGGTGTTTAAGCCCGAGTTAACCTTTCGGTTTTTCTATCTAAAATGTTGCTTTGTTTCCAACCTAATCTTCTCTTTATGCAAGATCGAGTTGACGATGCTTATTGGAATCTTAGAAGGGAAATAAGACTGAGTGATGGGAACCCTGATAATGGTTTGAAGTGCCGTGCTTCCAAAGCTTCAAGGATAGACTTAGTAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAACATGATCTTCATGCGGTTGTCTCCTTCAAACGGCAGAATTTTATATTCAGTCACCATCCACCGGACCAGCATTATGATACAATTCTTTGGTAAGTTGATCTTTTAATTTGTATGTTACGCATTAATGCTATTTGTTTCTTTGACCCTTGATACATTTCCCTTTTGTTGTTACAGTATGCATGTTTTTCTTTTCCTGTATTGCAGTTTGAGTGTGGCAAAGTGGATTCATCTTAACTGGGGAGATGATGGCTTGATTACATTGTTTTCCAAGATTTGGAAACTGCTTAACCCGGTACTTAACCGTCGTACATGCATGTCATCCTGCACTTTGTTATATTGGTTTGTATTTACATTTTCAATCTGATTCAGAACCTTCTTAATTATCCATTCATTCTGAAAAGGCAGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGGTAAAATATTCCGAGCATCCAGATTGTTTTAATCGACAATCACCTTGAGCCAAAGTTGAAAATTTTCTTAGTGGTGTTCTAGCTTCTCCTATCATATTGCCTTAGATTTCAGCTGATGTTTCGAATGCAGACTACTAAAATGAACTTCAGGACTATAAAGATCCTTCCAGAAGATTTTCAAGAAATACTCCTAGACAAGGTATTTATATGATTTATTTGGCTGAGTTTTTCAAACAGCATCAGTTTTCACTAATTCTTGGACAACATCCCACCCCAGATTGGATTCAGAACAGTTGAAGCCTTAAACATTGGCTTGGCCGACGGCAATTCAGGAGGATTCAATAGACCAATTTTAGTTTTCCAGAAGTAAAGTGTAGTAATATAGACATCTGAACCAAATACAGAGGCCATCAGCTGGTCTTTTTCTTTCTTTTTTTTTTTTCTTTGACGAGTGGGACGAGTGGGGTTGGGAAGATTGGATCCCAACTTTTGAGTTCTTGAATCAAGGGTATATTTTGTGACTCCACATTGGATCCGTTGAGTGGGTGTTTTGGAAAGAAGGGTGCAGTTAGTAGTGAGATGGGATCTTTCAACTCATGGATAGGCGTCTTTTGAAGGGTTGTTGTAAGCTTCTTCTAGTTTTTGTTGTTTACGTAAATTATACTTTAGTTAATGATTTGATCGCTTACGTATATTACTAATTCATGCACTCTTTTT ATGGCGGAAGCCCATGATAGAACCCAAGTAGAACGCAACCAAAATCCTAAAAAGCACAGGAAGCATGCTTTTCCCTATGGCAATTACCGAAATTACTATGGCTACCGGGTGGGTCAAAAATTGGTTGAAGATCCTCGTTTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGGTGCAATAATGGGATAGTTACCATCCAGATAGCTAGAAAGTTTAATTGCCGGAGTATTCTTGGTGTTGATATTGACTCTGATCGAGTTGACGATGCTTATTGGAATCTTAGAAGGGAAATAAGACTGAGTGATGGGAACCCTGATAATGGTTTGAAGTGCCGTGCTTCCAAAGCTTCAAGGATAGACTTAGTAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAACATGATCTTCATGCGGTTGTCTCCTTCAAACGGCAGAATTTTATATTCAGTCACCATCCACCGGACCAGCATTATGATACAATTCTTTGTATGCATGTTTTTCTTTTCCTGTATTGCAGTTTGAGTGTGGCAAAGTGGATTCATCTTAACTGGGGAGATGATGGCTTGATTACATTGTTTTCCAAGATTTGGAAACTGCTTAACCCGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGACTACTAAAATGAACTTCAGGACTATAAAGATCCTTCCAGAAGATTTTCAAGAAATACTCCTAGACAAGATTGGATTCAGAACAGTTGAAGCCTTAAACATTGGCTTGGCCGACGGCAATTCAGGAGGATTCAATAGACCAATTTTAGTTTTCCAGAAGTAA ATGGCGGAAGCCCATGATAGAACCCAAGTAGAACGCAACCAAAATCCTAAAAAGCACAGGAAGCATGCTTTTCCCTATGGCAATTACCGAAATTACTATGGCTACCGGGTGGGTCAAAAATTGGTTGAAGATCCTCGTTTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGGTGCAATAATGGGATAGTTACCATCCAGATAGCTAGAAAGTTTAATTGCCGGAGTATTCTTGGTGTTGATATTGACTCTGATCGAGTTGACGATGCTTATTGGAATCTTAGAAGGGAAATAAGACTGAGTGATGGGAACCCTGATAATGGTTTGAAGTGCCGTGCTTCCAAAGCTTCAAGGATAGACTTAGTAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAACATGATCTTCATGCGGTTGTCTCCTTCAAACGGCAGAATTTTATATTCAGTCACCATCCACCGGACCAGCATTATGATACAATTCTTTGTATGCATGTTTTTCTTTTCCTGTATTGCAGTTTGAGTGTGGCAAAGTGGATTCATCTTAACTGGGGAGATGATGGCTTGATTACATTGTTTTCCAAGATTTGGAAACTGCTTAACCCGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGACTACTAAAATGAACTTCAGGACTATAAAGATCCTTCCAGAAGATTTTCAAGAAATACTCCTAGACAAGATTGGATTCAGAACAGTTGAAGCCTTAAACATTGGCTTGGCCGACGGCAATTCAGGAGGATTCAATAGACCAATTTTAGTTTTCCAGAAGTAA MAEAHDRTQVERNQNPKKHRKHAFPYGNYRNYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIARKFNCRSILGVDIDSDRVDDAYWNLRREIRLSDGNPDNGLKCRASKASRIDLVEASTSISSSKEHDLHAVVSFKRQNFIFSHHPPDQHYDTILCMHVFLFLYCSLSVAKWIHLNWGDDGLITLFSKIWKLLNPGGILVLEPQPWKSYEANYSVSETTKMNFRTIKILPEDFQEILLDKIGFRTVEALNIGLADGNSGGFNRPILVFQK*
BLAST of Csa1G201780 vs. Swiss-Prot
Match: BIN3D_ARATH (Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana GN=At5g51130 PE=2 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.8e-87 Identity = 159/279 (56.99%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of Csa1G201780 vs. Swiss-Prot
Match: MEPCE_DANRE (7SK snRNA methylphosphate capping enzyme OS=Danio rerio GN=mepce PE=3 SV=2) HSP 1 Score: 176.0 bits (445), Expect = 5.8e-43 Identity = 105/303 (34.65%), Postives = 150/303 (49.50%), Query Frame = 1
BLAST of Csa1G201780 vs. Swiss-Prot
Match: BIN3D_CAEEL (Probable RNA methyltransferase Y17G7B.18 OS=Caenorhabditis elegans GN=Y17G7B.18 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.0e-40 Identity = 98/278 (35.25%), Postives = 144/278 (51.80%), Query Frame = 1
BLAST of Csa1G201780 vs. Swiss-Prot
Match: MEPCE_HUMAN (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39 Identity = 106/294 (36.05%), Postives = 149/294 (50.68%), Query Frame = 1
BLAST of Csa1G201780 vs. Swiss-Prot
Match: MEPCE_MOUSE (7SK snRNA methylphosphate capping enzyme OS=Mus musculus GN=Mepce PE=1 SV=2) HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39 Identity = 105/294 (35.71%), Postives = 148/294 (50.34%), Query Frame = 1
BLAST of Csa1G201780 vs. TrEMBL
Match: A0A0A0LTI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G201780 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 6.4e-166 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Csa1G201780 vs. TrEMBL
Match: A0A151T3M3_CAJCA (7SK snRNA methylphosphate capping enzyme OS=Cajanus cajan GN=KK1_016149 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.9e-93 Identity = 179/285 (62.81%), Postives = 209/285 (73.33%), Query Frame = 1
BLAST of Csa1G201780 vs. TrEMBL
Match: A0A0L9VSS8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g085200 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93 Identity = 179/289 (61.94%), Postives = 207/289 (71.63%), Query Frame = 1
BLAST of Csa1G201780 vs. TrEMBL
Match: A0A0S3QWZ4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G029000 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93 Identity = 179/289 (61.94%), Postives = 207/289 (71.63%), Query Frame = 1
BLAST of Csa1G201780 vs. TrEMBL
Match: I1KPY6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G035500 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 4.7e-92 Identity = 178/285 (62.46%), Postives = 209/285 (73.33%), Query Frame = 1
BLAST of Csa1G201780 vs. TAIR10
Match: AT5G51130.1 (AT5G51130.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 322.8 bits (826), Expect = 2.1e-88 Identity = 159/279 (56.99%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of Csa1G201780 vs. NCBI nr
Match: gi|778659881|ref|XP_011655239.1| (PREDICTED: probable RNA methyltransferase At5g51130 isoform X1 [Cucumis sativus]) HSP 1 Score: 591.3 bits (1523), Expect = 9.2e-166 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Csa1G201780 vs. NCBI nr
Match: gi|449465673|ref|XP_004150552.1| (PREDICTED: probable RNA methyltransferase At5g51130 isoform X2 [Cucumis sativus]) HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-156 Identity = 273/283 (96.47%), Postives = 273/283 (96.47%), Query Frame = 1
BLAST of Csa1G201780 vs. NCBI nr
Match: gi|659125575|ref|XP_008462755.1| (PREDICTED: probable RNA methyltransferase At5g51130 [Cucumis melo]) HSP 1 Score: 520.0 bits (1338), Expect = 2.6e-144 Identity = 255/283 (90.11%), Postives = 262/283 (92.58%), Query Frame = 1
BLAST of Csa1G201780 vs. NCBI nr
Match: gi|778659886|ref|XP_011655246.1| (PREDICTED: probable RNA methyltransferase At5g51130 isoform X3 [Cucumis sativus]) HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-121 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 1
BLAST of Csa1G201780 vs. NCBI nr
Match: gi|951013985|ref|XP_014510444.1| (PREDICTED: probable RNA methyltransferase At5g51130 [Vigna radiata var. radiata]) HSP 1 Score: 352.1 bits (902), Expect = 9.4e-94 Identity = 182/285 (63.86%), Postives = 209/285 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |