MELO3C018568 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGGTGATAAAACTTTGAAGCGATTACTTTTCCAGAAGTTTCAGATGTTTAGAGGCATCGTCAACGTTGAACTTGTGGTTGATGAAATAATAAAACATTGGATTAGAAAAGTTGAAGAAGATTTCAAGAGAATAATTCTAGGGTGTTTGCAGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN*
BLAST of MELO3C018568 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of MELO3C018568 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-07 Identity = 26/84 (30.95%), Postives = 39/84 (46.43%), Query Frame = 1
BLAST of MELO3C018568 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 5.0e-07 Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1
BLAST of MELO3C018568 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 3.2e-06 Identity = 27/81 (33.33%), Postives = 38/81 (46.91%), Query Frame = 1
BLAST of MELO3C018568 vs. Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP32A8.03c PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06 Identity = 24/78 (30.77%), Postives = 40/78 (51.28%), Query Frame = 1
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48 Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 1
HSP 2 Score: 177.2 bits (448), Expect = 2.1e-41 Identity = 119/270 (44.07%), Postives = 146/270 (54.07%), Query Frame = 1
BLAST of MELO3C018568 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.0e-40 Identity = 92/120 (76.67%), Postives = 100/120 (83.33%), Query Frame = 1
BLAST of MELO3C018568 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28 Identity = 79/147 (53.74%), Postives = 98/147 (66.67%), Query Frame = 1
HSP 2 Score: 166.8 bits (421), Expect = 2.9e-38 Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = 1
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.5e-36 Identity = 109/267 (40.82%), Postives = 142/267 (53.18%), Query Frame = 1
HSP 2 Score: 165.2 bits (417), Expect = 8.4e-38 Identity = 88/124 (70.97%), Postives = 100/124 (80.65%), Query Frame = 1
BLAST of MELO3C018568 vs. TAIR10
Match: AT3G13228.1 (AT3G13228.1 RING/U-box superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 5.1e-10 Identity = 33/121 (27.27%), Postives = 59/121 (48.76%), Query Frame = 1
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 1
BLAST of MELO3C018568 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein) HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09 Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 1
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08 Identity = 30/81 (37.04%), Postives = 40/81 (49.38%), Query Frame = 1
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo]) HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 1.5e-48 Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 1
HSP 2 Score: 177.2 bits (448), Expect = 3.1e-41 Identity = 119/270 (44.07%), Postives = 146/270 (54.07%), Query Frame = 1
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 5.8e-40 Identity = 92/120 (76.67%), Postives = 100/120 (83.33%), Query Frame = 1
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 6.7e-28 Identity = 79/147 (53.74%), Postives = 98/147 (66.67%), Query Frame = 1
HSP 2 Score: 166.8 bits (421), Expect = 4.2e-38 Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = 1
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo]) HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36 Identity = 109/267 (40.82%), Postives = 142/267 (53.18%), Query Frame = 1
HSP 2 Score: 165.2 bits (417), Expect = 1.2e-37 Identity = 88/124 (70.97%), Postives = 100/124 (80.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |