MELO3C012681 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCGATTTTCTAGATGAAGATATCATGACGATAGTAAATACCTCATCGGATACATGGACAATGATGTTTGACAGAGCCACAAACAAAGTAGGACACGGTATGGGAGTGACTTTGATGTCCCCTGATGAGAAGAGGTACCCTTTCACTACTAAGTTATATTTCGATTGCACCAATAATATGGTTGAGTATAAAGCATGTAGTATGGGAGTGCGAATAGCATACGAGATGAAAATAAAAAATTTACGAGTCCTTGGGGACTCCCTATTGGTTGTACATAAGCTCAATGGGGAATATGAGACGAGGGATGCTAAATTCATCCCTTATAATGATTATATTTGCACAATAGCTCAAACTTTTGATTCGATAATGTTTGAACACATCCCATGCCAAAGCAACCAAGTTGTAGATGTATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAATGAAAAAGTTCAACCTATAAGGATGGAGAAGTATAAGACACCATCCTGCTGTATGAACCTCGAGCAAGAACCTGATGGTAAACCTTGGTATCATCATAGTAACCATTACATTGCATATCGGGAGTATCCACCAAGGGCATCAGAAAATAGTAAGCGTACCATTAGGAAGCTAGCCATGACTCTACTGCGATGTGTCGATGCCTTAGAAGCCAAAAAGATTTTGGAAGAAATTCATGAAGGAGTTTGTGGGACGCATGCAAATGGACACATGATGGCGAG ATGAAGTTCGATTTTCTAGATGAAGATATCATGACGATAGTAAATACCTCATCGGATACATGGACAATGATGTTTGACAGAGCCACAAACAAAGTAGGACACGGTATGGGAGTGACTTTGATGTCCCCTGATGAGAAGAGGTACCCTTTCACTACTAAGTTATATTTCGATTGCACCAATAATATGGTTGAGTATAAAGCATGTAGTATGGGAGTGCGAATAGCATACGAGATGAAAATAAAAAATTTACGAGTCCTTGGGGACTCCCTATTGGTTGTACATAAGCTCAATGGGGAATATGAGACGAGGGATGCTAAATTCATCCCTTATAATGATTATATTTGCACAATAGCTCAAACTTTTGATTCGATAATGTTTGAACACATCCCATGCCAAAGCAACCAAGTTGTAGATGTATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAATGAAAAAGTTCAACCTATAAGGATGGAGAAGTATAAGACACCATCCTGCTGTATGAACCTCGAGCAAGAACCTGATGGTAAACCTTGGTATCATCATAGTAACCATTACATTGCATATCGGGAGTATCCACCAAGGGCATCAGAAAATAGTAAGCGTACCATTAGGAAGCTAGCCATGACTCTACTGCGATGTGTCGATGCCTTAGAAGCCAAAAAGATTTTGGAAGAAATTCATGAAGGAGTTTGTGGGACGCATGCAAATGGACACATGATGGCGAG ATGAAGTTCGATTTTCTAGATGAAGATATCATGACGATAGTAAATACCTCATCGGATACATGGACAATGATGTTTGACAGAGCCACAAACAAAGTAGGACACGGTATGGGAGTGACTTTGATGTCCCCTGATGAGAAGAGGTACCCTTTCACTACTAAGTTATATTTCGATTGCACCAATAATATGGTTGAGTATAAAGCATGTAGTATGGGAGTGCGAATAGCATACGAGATGAAAATAAAAAATTTACGAGTCCTTGGGGACTCCCTATTGGTTGTACATAAGCTCAATGGGGAATATGAGACGAGGGATGCTAAATTCATCCCTTATAATGATTATATTTGCACAATAGCTCAAACTTTTGATTCGATAATGTTTGAACACATCCCATGCCAAAGCAACCAAGTTGTAGATGTATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAATGAAAAAGTTCAACCTATAAGGATGGAGAAGTATAAGACACCATCCTGCTGTATGAACCTCGAGCAAGAACCTGATGGTAAACCTTGGTATCATCATAGTAACCATTACATTGCATATCGGGAGTATCCACCAAGGGCATCAGAAAATAGTAAGCGTACCATTAGGAAGCTAGCCATGACTCTACTGCGATGTGTCGATGCCTTAGAAGCCAAAAAGATTTTGGAAGAAATTCATGAAGGAGTTTGTGGGACGCATGCAAATGGACACATGATGGCGAG MKFDFLDEDIMTIVNTSSDTWTMMFDRATNKVGHGMGVTLMSPDEKRYPFTTKLYFDCTNNMVEYKACSMGVRIAYEMKIKNLRVLGDSLLVVHKLNGEYETRDAKFIPYNDYICTIAQTFDSIMFEHIPCQSNQVVDVLATLSAMFNVAYNEKVQPIRMEKYKTPSCCMNLEQEPDGKPWYHHSNHYIAYREYPPRASENSKRTIRKLAMTLLRCVDALEAKKILEEIHEGVCGTHANGHMMA
BLAST of MELO3C012681 vs. TrEMBL
Match: A0A061DRM3_THECC (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H OS=Theobroma cacao GN=TCM_004328 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70 Identity = 128/265 (48.30%), Postives = 181/265 (68.30%), Query Frame = 1
BLAST of MELO3C012681 vs. TrEMBL
Match: A0A061EFI0_THECC (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H OS=Theobroma cacao GN=TCM_010987 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70 Identity = 129/265 (48.68%), Postives = 179/265 (67.55%), Query Frame = 1
BLAST of MELO3C012681 vs. TrEMBL
Match: A0A061GK83_THECC (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative OS=Theobroma cacao GN=TCM_037531 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69 Identity = 128/265 (48.30%), Postives = 179/265 (67.55%), Query Frame = 1
BLAST of MELO3C012681 vs. TrEMBL
Match: A0A061FXI5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_044654 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.6e-64 Identity = 121/266 (45.49%), Postives = 174/266 (65.41%), Query Frame = 1
BLAST of MELO3C012681 vs. TrEMBL
Match: A0A061FF52_THECC (RNA-directed DNA polymerase, putative OS=Theobroma cacao GN=TCM_034880 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 8.7e-63 Identity = 119/266 (44.74%), Postives = 167/266 (62.78%), Query Frame = 1
BLAST of MELO3C012681 vs. TAIR10
Match: AT3G01410.1 (AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09 Identity = 40/132 (30.30%), Postives = 63/132 (47.73%), Query Frame = 1
BLAST of MELO3C012681 vs. NCBI nr
Match: gi|659092961|ref|XP_008447313.1| (PREDICTED: uncharacterized protein LOC103489784 [Cucumis melo]) HSP 1 Score: 510.0 bits (1312), Expect = 2.3e-141 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of MELO3C012681 vs. NCBI nr
Match: gi|659134004|ref|XP_008466990.1| (PREDICTED: uncharacterized protein LOC103504389 [Cucumis melo]) HSP 1 Score: 336.3 bits (861), Expect = 4.6e-89 Identity = 163/212 (76.89%), Postives = 178/212 (83.96%), Query Frame = 1
BLAST of MELO3C012681 vs. NCBI nr
Match: gi|590696646|ref|XP_007045222.1| (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Theobroma cacao]) HSP 1 Score: 272.7 bits (696), Expect = 6.2e-70 Identity = 129/265 (48.68%), Postives = 179/265 (67.55%), Query Frame = 1
BLAST of MELO3C012681 vs. NCBI nr
Match: gi|590717220|ref|XP_007050559.1| (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Theobroma cacao]) HSP 1 Score: 272.7 bits (696), Expect = 6.2e-70 Identity = 128/265 (48.30%), Postives = 181/265 (68.30%), Query Frame = 1
BLAST of MELO3C012681 vs. NCBI nr
Match: gi|590575278|ref|XP_007012641.1| (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative [Theobroma cacao]) HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69 Identity = 128/265 (48.30%), Postives = 179/265 (67.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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