MELO3C024130 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024130
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPlant self-incompatibility protein S1 family
Locationchr1 : 5559434 .. 5559841 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTAGTTGAGGGTCAAGTTCCGAATTGGTCGGAACCTCCACCGCAAGCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTGAGCTACCACAATTTGGATGTGCATTGCCAATCGAAGGACGATGATTTGGGATATCATTGTTTGGTTAACCATGGAGACGATTTCCAATGGAACTTTAGAGAAAATTTCTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAAGCTGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCAAGGAACCTTTGGCTTCGTTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCTAAGGATGATGGAATTTATTTGAGAAACTTGTCTACTAATGTTGATGAATTTGTTCATAAATGGATCCCTAAGTAA

mRNA sequence

ATGGTTTTAGTTGAGGGTCAAGTTCCGAATTGGTCGGAACCTCCACCGCAAGCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTGAGCTACCACAATTTGGATGTGCATTGCCAATCGAAGGACGATGATTTGGGATATCATTGTTTGGTTAACCATGGAGACGATTTCCAATGGAACTTTAGAGAAAATTTCTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAAGCTGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCAAGGAACCTTTGGCTTCGTTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCTAAGGATGATGGAATTTATTTGAGAAACTTGTCTACTAATGTTGATGAATTTGTTCATAAATGGATCCCTAAGTAA

Coding sequence (CDS)

ATGGTTTTAGTTGAGGGTCAAGTTCCGAATTGGTCGGAACCTCCACCGCAAGCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTGAGCTACCACAATTTGGATGTGCATTGCCAATCGAAGGACGATGATTTGGGATATCATTGTTTGGTTAACCATGGAGACGATTTCCAATGGAACTTTAGAGAAAATTTCTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAAGCTGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCAAGGAACCTTTGGCTTCGTTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCTAAGGATGATGGAATTTATTTGAGAAACTTGTCTACTAATGTTGATGAATTTGTTCATAAATGGATCCCTAAGTAA

Protein sequence

MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKWIPK*
Homology
[Close]
BLAST of MELO3C024130 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-24
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1 

Query: 9   PNWSEPPPQASRYFVHVVNGLSY-HNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWG 68
           P    P  + +++ VHVVN L     L  HC+SKDDDLG   L   G +F W+F+ENF+G
Sbjct: 7   PCLGSPGIRYNKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAP-GTEFNWSFKENFFG 66

Query: 69  TTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDE 128
           TTL+WC +     + A + FW E  + WL+YRC  +   CIW AKDDGIY++ +  N DE
Sbjct: 67  TTLYWCYMSTDQKHAALDVFWVEGDHSWLQYRCNWK--DCIWIAKDDGIYIKIIPENRDE 126

Query: 129 FVHKW 133
           F HKW
Sbjct: 127 FSHKW 128

[Close]
BLAST of MELO3C024130 vs. TrEMBL
Match: B9GR91_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s25380g PE=4 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23
Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 1 

Query: 21  YFVHVVNGLSYHN-LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKLD 80
           + V+VVNGLS +  L VHC+SKDDDLG+HCL + GD+F W+FRE+F+  TLFWC + K D
Sbjct: 44  WHVYVVNGLSNNRELSVHCKSKDDDLGFHCL-SAGDNFTWSFREDFFLRTLFWCDVNKDD 103

Query: 81  AYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLS-TNVDEFVHKWIP 135
           A+  F+ FW    ++ L Y+C      C+WT KDDGIY++NL    +DE    W P
Sbjct: 104 AHAVFKVFW---HDVLLFYKC--MWKNCVWTVKDDGIYIKNLDHDGLDELYRNWEP 153

[Close]
BLAST of MELO3C024130 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-22
Identity = 57/116 (49.14%), Postives = 73/116 (62.93%), Query Frame = 1 

Query: 19  SRYFVHVVNGLSYHN-LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEK 78
           S + +H+ NGLS    L VHC+SKD DLG   L + G +F+WNF+ N W TTLFWC L K
Sbjct: 28  SPWEIHIKNGLSDGQALFVHCKSKDSDLGERTL-STGAEFKWNFKVNIWDTTLFWCYLRK 87

Query: 79  LDA-YVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKW 133
                V FE+FW E +  WLR +C   +  C W A+D GIYL++ STN DE +H W
Sbjct: 88  PKGDQVRFEAFWVEKKTRWLRVKCDGNI--CNWIAEDTGIYLKDNSTNEDERIHYW 140

[Close]
BLAST of MELO3C024130 vs. TrEMBL
Match: B9S578_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-22
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 20  RYFVHVVNGLSYHN-LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKL 79
           ++ VHVVNGLS +  L +HC+S D+DLG H L   G +F W+FR NF  TTL+WC +   
Sbjct: 32  KFHVHVVNGLSRNKILQIHCKSADNDLGAHSLAK-GREFSWSFRINFILTTLYWCHMAPD 91

Query: 80  D-AYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKW 133
           D ++V  + FW      +L  RCG     CIWTAKDDG+YLRN+  N DEF HKW
Sbjct: 92  DHSHVDLKVFWDSQ---YLFERCGGAQ-QCIWTAKDDGVYLRNIPKNTDEFQHKW 141

[Close]
BLAST of MELO3C024130 vs. TrEMBL
Match: B9S577_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-21
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 20  RYFVHVVNGLSYHN-LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKL 79
           ++ VHVVNGLS    L VHC+S D+DLG   L N G +F W+FR NF+ TTL+WC +   
Sbjct: 27  KFHVHVVNGLSPDKILFVHCKSADNDLGARNLSN-GQEFSWSFRMNFFMTTLYWCHMAPD 86

Query: 80  D-AYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKW 133
           D +YV  + FW      +L  RCG+    CIW AKD+G+YLRN+  N+DEF H W
Sbjct: 87  DHSYVDMKVFWDSQ---YLSERCGHDQ-QCIWIAKDNGVYLRNIPMNIDEFQHNW 136

[Close]
BLAST of MELO3C024130 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 87.4 bits (215), Expect = 7.3e-18
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 1 

Query: 16  PQASRYFVHVVNGLSY-HNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCR 75
           P+ S + V VVNGL+    L +HC+SK+DDLG    +   + F WNF EN   +T FWC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLG-EINLKFRNRFSWNFGENMLHSTFFWCY 95

Query: 76  LEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKW 133
           + K + ++    FW +   + L +RCG +   CIWTAK DG+YL N ++  D    KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGWK--NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]
BLAST of MELO3C024130 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 1 

Query: 16  PQASRYFVHVVNGLSY-HNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCR 75
           P+ S + V V NGL+    L +HC+SK++DLG    +   D F WNF EN   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLG-DINLKFLDRFSWNFGENMLHSTLFWCY 95

Query: 76  LEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKW 133
           + K D ++  + FW +   + L +RC  +   C+WTAK+DG+YL N +   D    KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWK--NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]
BLAST of MELO3C024130 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 43/117 (36.75%), Postives = 57/117 (48.72%), Query Frame = 1 

Query: 23  VHVVNGLS----YHNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKL 82
           +H+ N L     + +L V C+S   D+G H  V +G  +Q++ R+NFW TTLFWC     
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKH-YVKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 83  DAYVAFESFWPESRNLWLRYRCG-NQLGTCIWTAKDDGIYLRNLSTNVDEFVHKWIP 135
             Y   + F          Y+ G  Q GT  WTA++DGIY R L+      VH W P
Sbjct: 86  PDYRTGQQFDV------YEYKPGVAQGGTYEWTAREDGIYFR-LNQGTIHKVHNWKP 134

[Close]
BLAST of MELO3C024130 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 34  LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEK-------LDAYVAFES 93
           L VHC+SKDDDLG H ++  G D+++ F +N W TT F C++++       LD +VA+E+
Sbjct: 41  LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLD-FVAYET 100

Query: 94  FWPESRNLWLRYRCGNQLGTCIWTAKDDGIY 118
            W ++              +C W  ++DGIY
Sbjct: 101 SWSKALE-----------ASCKWIGREDGIY 118

[Close]
BLAST of MELO3C024130 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-09
Identity = 36/101 (35.64%), Postives = 47/101 (46.53%), Query Frame = 1 

Query: 34  LDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWCRLEKLDAYVAFESFWPESRN 93
           L +HC+SKDDDLG+H +   G+ + W F  NF  +TL++C   +              R+
Sbjct: 59  LGIHCKSKDDDLGFH-IHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD 118

Query: 94  LWLRYRCGNQLGTCIWTAKDDGIY-LRNLSTNVDEFVHKWI 134
               YRC N    C W AK D +Y   NL   V  F  KW+
Sbjct: 119 F---YRCRN----CTWNAKKDSLYGYSNLPQTVTWF-FKWL 150

[Close]
BLAST of MELO3C024130 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 2.8e-80
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

Query: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60
           MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN
Sbjct: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60

Query: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN
Sbjct: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 LSTNVDEFVHKWIPK 136
           LSTNVDEFVHKWIPK
Sbjct: 121 LSTNVDEFVHKWIPK 135

[Close]
BLAST of MELO3C024130 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-70
Identity = 119/135 (88.15%), Postives = 124/135 (91.85%), Query Frame = 1 

Query: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60
           MVLVE QVPNWSEPPP ASRYFVHVVNGLS H+LDVHC+SKDDDLGYH +VNHGDDFQWN
Sbjct: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWN 60

Query: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           F ENFWGTTLFWCRLE  +AY  FESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN
Sbjct: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 LSTNVDEFVHKWIPK 136
           +  NVDEFVHKWIPK
Sbjct: 121 MPANVDEFVHKWIPK 135

[Close]
BLAST of MELO3C024130 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 6.3e-64
Identity = 111/135 (82.22%), Postives = 122/135 (90.37%), Query Frame = 1 

Query: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60
           MVLVEG+V  W +PPP+ SRYFVHVVNGLSY +LDVHCQSK+DDLGYH LVN GD++QWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           F EN WGTTLFWCRLEK DAYVAFESFWPE++N+WLR RCGNQ GTCIWTAKDDGIYLRN
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQ-GTCIWTAKDDGIYLRN 120

Query: 121 LSTNVDEFVHKWIPK 136
           + TNVDEFVHKWIPK
Sbjct: 121 MPTNVDEFVHKWIPK 134

[Close]
BLAST of MELO3C024130 vs. NCBI nr
Match: gi|778730337|ref|XP_004139721.2| (PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 4.5e-62
Identity = 111/135 (82.22%), Postives = 120/135 (88.89%), Query Frame = 1 

Query: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60
           MVLVEG  P  ++P  QASRYFVHVVNGLSY +LDVHCQSKD+DLGYH LVNHGD+FQWN
Sbjct: 1   MVLVEG--PRLAKPLQQASRYFVHVVNGLSYQSLDVHCQSKDNDLGYHHLVNHGDEFQWN 60

Query: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           F ENFWGTTLFWCRLEK DAYVAFESFWPES+N+WLR RCGNQLGTCIW AKDDGIYL+N
Sbjct: 61  FEENFWGTTLFWCRLEKWDAYVAFESFWPESKNIWLRDRCGNQLGTCIWIAKDDGIYLKN 120

Query: 121 LSTNVDEFVHKWIPK 136
           + TN DEFVHKWI K
Sbjct: 121 MLTNFDEFVHKWIHK 133

[Close]
BLAST of MELO3C024130 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-61
Identity = 110/134 (82.09%), Postives = 117/134 (87.31%), Query Frame = 1 

Query: 2   VLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWNF 61
           V+VEGQV  W +PPPQ SRYFV+VVNGLSYH+LDVHCQSKDDDLGYH LVNHGD FQWNF
Sbjct: 13  VVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNF 72

Query: 62  RENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNL 121
            ENF+GTTLFWCRLEK DAYVAFESFWPES N WLR RCGNQ GTC+W AKDDGIYLRN+
Sbjct: 73  EENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQ-GTCVWIAKDDGIYLRNI 132

Query: 122 STNVDEFVHKWIPK 136
             NVDE VHKWI K
Sbjct: 133 PVNVDELVHKWISK 145

The following BLAST results are available for this feature:
BLAST of MELO3C024130 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VWE5_PRUPE3.4e-2446.40Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
B9GR91_POPTR2.2e-2350.00Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s25380g P... [more]
A0A0A0K6N8_CUCSA3.2e-2249.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1[more]
B9S578_RICCO4.2e-2250.43Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1[more]
B9S577_RICCO2.7e-2149.57Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1[more]
BLAST of MELO3C024130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.17.3e-1840.68 S-protein homologue 1[more]
AT4G29035.12.8e-1739.83 Plant self-incompatibility protein S1 family[more]
AT1G28305.13.0e-1136.75 Plant self-incompatibility protein S1 family[more]
AT5G04350.11.9e-1036.26 Plant self-incompatibility protein S1 family[more]
AT5G06020.14.7e-0935.64 Plant self-incompatibility protein S1 family[more]
BLAST of MELO3C024130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124349|ref|XP_008462111.1|2.8e-80100.00PREDICTED: pumilio homolog 15-like [Cucumis melo][more]
gi|449443935|ref|XP_004139731.1|3.5e-7088.15PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
gi|659124355|ref|XP_008462115.1|6.3e-6482.22PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|778730337|ref|XP_004139721.2|4.5e-6282.22PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus][more]
gi|659124347|ref|XP_008462110.1|1.0e-6182.09PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024130T1MELO3C024130T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 23..132
score: 5.1
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 19..132
score: 1.1
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 19..132
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024130Cucurbita pepo (Zucchini)cpemeB297
MELO3C024130Bottle gourd (USVL1VR-Ls)lsimeB194
MELO3C024130Cucumber (Gy14) v2cgybmeB474
MELO3C024130Silver-seed gourdcarmeB0086
MELO3C024130Cucumber (Chinese Long) v3cucmeB554
MELO3C024130Watermelon (97103) v2mewmbB212
MELO3C024130Wax gourdmewgoB242
MELO3C024130Cucumber (Gy14) v1cgymeB081
MELO3C024130Cucurbita maxima (Rimu)cmameB829
MELO3C024130Cucurbita moschata (Rifu)cmomeB813
MELO3C024130Wild cucumber (PI 183967)cpimeB544
MELO3C024130Cucumber (Chinese Long) v2cumeB539
MELO3C024130Watermelon (Charleston Gray)mewcgB165
MELO3C024130Watermelon (97103) v1mewmB187