MELO3C026823 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026823
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Proton pump interactor, putative
Location	chr10 : 14039750 .. 14040112 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGCAAAGCTTCAGGATTCGATGGTACAGAAAGAAGCCCTCCAAGATCAAGTCAAGGTTAGGAACGTGAAGTTGAATCCAATTCTGTTTTACTAATTAACTGCTGTAATGCAATAAATTCACGTCTTACAAATCATGGTAATGTAGATCATAGGTGGTGATTTGGATGGAGTGAGGAAGGAACAACAAGCCATTAGAGCCAAGATAAAGCAACTCGATGATGCCTTGAAGGAAATAGACAATGAAATTAAAACTTTGCAGGATGAGCTAGCTTCTGTTACAGAGAAGAGAGGCAGAGCTCACGAAAGCATTCAGCAACTTAGGAAGAATCGTGATGAGGGGGTGTGTTGGATTACTTGA

mRNA sequence

ATGAGAGCAAAGCTTCAGGATTCGATGGTACAGAAAGAAGCCCTCCAAGATCAAGTCAAGATCATAGGTGGTGATTTGGATGGAGTGAGGAAGGAACAACAAGCCATTAGAGCCAAGATAAAGCAACTCGATGATGCCTTGAAGGAAATAGACAATGAAATTAAAACTTTGCAGGATGAGCTAGCTTCTGTTACAGAGAAGAGAGGCAGAGCTCACGAAAGCATTCAGCAACTTAGGAAGAATCGTGATGAGGGGGTGTGTTGGATTACTTGA

Coding sequence (CDS)

ATGAGAGCAAAGCTTCAGGATTCGATGGTACAGAAAGAAGCCCTCCAAGATCAAGTCAAGATCATAGGTGGTGATTTGGATGGAGTGAGGAAGGAACAACAAGCCATTAGAGCCAAGATAAAGCAACTCGATGATGCCTTGAAGGAAATAGACAATGAAATTAAAACTTTGCAGGATGAGCTAGCTTCTGTTACAGAGAAGAGAGGCAGAGCTCACGAAAGCATTCAGCAACTTAGGAAGAATCGTGATGAGGGGGTGTGTTGGATTACTTGA

Protein sequence

MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDELASVTEKRGRAHESIQQLRKNRDEGVCWIT*

Homology

[Close]

BLAST of MELO3C026823 vs. Swiss-Prot
Match: PPI1_ARATH (Proton pump-interactor 1 OS=Arabidopsis thaliana GN=PPI1 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-17
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+++SM QK+ +Q QVK++G  LDGV+KE+QAI A+I +L + LK   +EI  L++E
Sbjct: 226 MRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVLENE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDE 85
           L +V+EKR +A+ +I  LR+ RDE
Sbjct: 286 LKTVSEKRDKAYSNIHDLRRQRDE 309

[Close]

BLAST of MELO3C026823 vs. Swiss-Prot
Match: PPI2_ARATH (Proton pump-interactor 2 OS=Arabidopsis thaliana GN=PPI2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.6e-08
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 1


Query: 6   QDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDELASVT 65
           +DS+ +KEA  ++VK +  +L+ V+KE  AI  KI  L D + +  N ++ L  + A + 
Sbjct: 205 EDSLAEKEASINRVKSMAVELNEVKKELDAITWKINHLSDKVGKSQNNLRVLDVKKAHIL 264

Query: 66  EKRGRAHESIQQLRKNRDEG 86
           E+R R++E I+ LR  RD+G
Sbjct: 265 EERDRSYERIKMLRIQRDKG 284

[Close]

BLAST of MELO3C026823 vs. TrEMBL
Match: A0A0A0L261_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637150 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-36
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQA+RAKIKQLDDALK IDNEIKTLQDE
Sbjct: 226 MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAVRAKIKQLDDALKAIDNEIKTLQDE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L SVTEKRGRAHESIQQLRKNRDEG
Sbjct: 286 LTSVTEKRGRAHESIQQLRKNRDEG 310

[Close]

BLAST of MELO3C026823 vs. TrEMBL
Match: A0A151S5G2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028138 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-27
Identity = 62/85 (72.94%), Postives = 78/85 (91.76%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+QDSM QKEA+QDQVK+IGGDLDGV+KE+QAIR+KIKQLDD ++ +D +I +LQDE
Sbjct: 229 MRAKVQDSMGQKEAIQDQVKLIGGDLDGVKKERQAIRSKIKQLDDGIQALDKDIMSLQDE 288

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           LA++TEKR +A+ESIQQLRK RD+G
Sbjct: 289 LAAITEKREKAYESIQQLRKQRDQG 313

[Close]

BLAST of MELO3C026823 vs. TrEMBL
Match: W9QMM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011324 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-27
Identity = 63/85 (74.12%), Postives = 75/85 (88.24%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+Q+SMVQKE LQDQVK+IGGDLDGVRKEQQ +RAKIKQL+DALK ID +I +LQDE
Sbjct: 282 MRAKIQESMVQKEVLQDQVKLIGGDLDGVRKEQQTVRAKIKQLEDALKVIDKDISSLQDE 341

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L +++EKR +A E IQQLRK RD+G
Sbjct: 342 LTAISEKRDKAREIIQQLRKERDDG 366

[Close]

BLAST of MELO3C026823 vs. TrEMBL
Match: A0A0S3S9R0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050900 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.4e-27
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+QDSM QKEA+QDQVK+IGGDLDG +KE+Q IR+KIKQLDDA+K +D +I++LQDE
Sbjct: 237 MRAKVQDSMGQKEAIQDQVKLIGGDLDGAKKERQVIRSKIKQLDDAVKALDKDIQSLQDE 296

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L +VTEKR +A+E+IQQLRK RD+G
Sbjct: 297 LGAVTEKRDKAYENIQQLRKQRDQG 321

[Close]

BLAST of MELO3C026823 vs. TrEMBL
Match: A0A0L9V308_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g016800 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.4e-27
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+QDSM QKEA+QDQVK+IGGDLDG +KE+Q IR+KIKQLDDA+K +D +I++LQDE
Sbjct: 237 MRAKVQDSMGQKEAIQDQVKLIGGDLDGAKKERQVIRSKIKQLDDAVKALDKDIQSLQDE 296

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L +VTEKR +A+E+IQQLRK RD+G
Sbjct: 297 LGAVTEKRDKAYENIQQLRKQRDQG 321

[Close]

BLAST of MELO3C026823 vs. TAIR10
Match: AT4G27500.1 (AT4G27500.1 proton pump interactor 1)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-18
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAK+++SM QK+ +Q QVK++G  LDGV+KE+QAI A+I +L + LK   +EI  L++E
Sbjct: 226 MRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVLENE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDE 85
           L +V+EKR +A+ +I  LR+ RDE
Sbjct: 286 LKTVSEKRDKAYSNIHDLRRQRDE 309

[Close]

BLAST of MELO3C026823 vs. TAIR10
Match: AT3G15340.1 (AT3G15340.1 proton pump interactor 2)

HSP 1 Score: 57.4 bits (137), Expect = 5.4e-09
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 1


Query: 6   QDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDELASVT 65
           +DS+ +KEA  ++VK +  +L+ V+KE  AI  KI  L D + +  N ++ L  + A + 
Sbjct: 205 EDSLAEKEASINRVKSMAVELNEVKKELDAITWKINHLSDKVGKSQNNLRVLDVKKAHIL 264

Query: 66  EKRGRAHESIQQLRKNRDEG 86
           E+R R++E I+ LR  RD+G
Sbjct: 265 EERDRSYERIKMLRIQRDKG 284

[Close]

BLAST of MELO3C026823 vs. TAIR10
Match: AT5G36780.1 (AT5G36780.1 AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.)

HSP 1 Score: 50.4 bits (119), Expect = 6.6e-07
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 1


Query: 11  QKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDELASVTEKRGR 70
           +KEA  ++VK +  +L+ V+ E  AI  KI  L D L +  N I+ L  E A + EKR R
Sbjct: 205 EKEASINRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILEKRDR 264

Query: 71  AHESIQQLRKNRDEG 86
            +  I+ LR  RD+G
Sbjct: 265 FYARIKMLRIQRDKG 279

[Close]

BLAST of MELO3C026823 vs. TAIR10
Match: AT5G36690.1 (AT5G36690.1 AT5G36690 and AT5G36780 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.)

HSP 1 Score: 50.4 bits (119), Expect = 6.6e-07
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 1


Query: 11  QKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDELASVTEKRGR 70
           +KEA  ++VK +  +L+ V+ E  AI  KI  L D L +  N I+ L  E A + EKR R
Sbjct: 205 EKEASINRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILEKRDR 264

Query: 71  AHESIQQLRKNRDEG 86
            +  I+ LR  RD+G
Sbjct: 265 FYARIKMLRIQRDKG 279

[Close]

BLAST of MELO3C026823 vs. NCBI nr
Match: gi|659130607|ref|XP_008465256.1| (PREDICTED: proton pump-interactor 1-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1


Query: 1  MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
          MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE
Sbjct: 1  MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60

Query: 61 LASVTEKRGRAHESIQQLRKNRDEGVCWIT 91
          LASVTEKRGRAHESIQQLRKNRDEGVCWIT
Sbjct: 61 LASVTEKRGRAHESIQQLRKNRDEGVCWIT 90

[Close]

BLAST of MELO3C026823 vs. NCBI nr
Match: gi|778695916|ref|XP_011654071.1| (PREDICTED: proton pump-interactor 1 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-36
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQA+RAKIKQLDDALK IDNEIKTLQDE
Sbjct: 226 MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAVRAKIKQLDDALKAIDNEIKTLQDE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L SVTEKRGRAHESIQQLRKNRDEG
Sbjct: 286 LTSVTEKRGRAHESIQQLRKNRDEG 310

[Close]

BLAST of MELO3C026823 vs. NCBI nr
Match: gi|700199966|gb|KGN55124.1| (hypothetical protein Csa_4G637150 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-36
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQA+RAKIKQLDDALK IDNEIKTLQDE
Sbjct: 226 MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAVRAKIKQLDDALKAIDNEIKTLQDE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L SVTEKRGRAHESIQQLRKNRDEG
Sbjct: 286 LTSVTEKRGRAHESIQQLRKNRDEG 310

[Close]

BLAST of MELO3C026823 vs. NCBI nr
Match: gi|659103061|ref|XP_008452453.1| (PREDICTED: proton pump-interactor 1 isoform X1 [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-36
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQA+RAKIKQLDDALK IDNEIKTLQDE
Sbjct: 226 MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAVRAKIKQLDDALKAIDNEIKTLQDE 285

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L SVTEKRGRAHESIQQLRKNRDEG
Sbjct: 286 LTSVTEKRGRAHESIQQLRKNRDEG 310

[Close]

BLAST of MELO3C026823 vs. NCBI nr
Match: gi|659103065|ref|XP_008452455.1| (PREDICTED: proton pump-interactor 1 isoform X3 [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-36
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1   MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAIRAKIKQLDDALKEIDNEIKTLQDE 60
           MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQA+RAKIKQLDDALK IDNEIKTLQDE
Sbjct: 112 MRAKLQDSMVQKEALQDQVKIIGGDLDGVRKEQQAVRAKIKQLDDALKAIDNEIKTLQDE 171

Query: 61  LASVTEKRGRAHESIQQLRKNRDEG 86
           L SVTEKRGRAHESIQQLRKNRDEG
Sbjct: 172 LTSVTEKRGRAHESIQQLRKNRDEG 196

The following BLAST results are available for this feature:

BLAST of MELO3C026823 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPI1_ARATH	2.3e-17	51.19	Proton pump-interactor 1 OS=Arabidopsis thaliana GN=PPI1 PE=1 SV=2	[more]
PPI2_ARATH	9.6e-08	37.50	Proton pump-interactor 2 OS=Arabidopsis thaliana GN=PPI2 PE=2 SV=1	[more]

BLAST of MELO3C026823 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L261_CUCSA	1.2e-36	96.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637150 PE=4 SV=1	[more]
A0A151S5G2_CAJCA	2.2e-27	72.94	Uncharacterized protein OS=Cajanus cajan GN=KK1_028138 PE=4 SV=1	[more]
W9QMM9_9ROSA	2.2e-27	74.12	Uncharacterized protein OS=Morus notabilis GN=L484_011324 PE=4 SV=1	[more]
A0A0S3S9R0_PHAAN	6.4e-27	71.76	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050900 PE=...	[more]
A0A0L9V308_PHAAN	6.4e-27	71.76	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g016800 PE=4 SV=1	[more]

BLAST of MELO3C026823 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27500.1	1.3e-18	51.19	proton pump interactor 1	[more]
AT3G15340.1	5.4e-09	37.50	proton pump interactor 2	[more]
AT5G36780.1	6.6e-07	40.00	AT5G36780 and AT5G36690 represent identical copies. The duplication ...	[more]
AT5G36690.1	6.6e-07	40.00	AT5G36690 and AT5G36780 represent identical copies. The duplication ...	[more]

BLAST of MELO3C026823 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130607\|ref\|XP_008465256.1\|	1.3e-41	100.00	PREDICTED: proton pump-interactor 1-like [Cucumis melo]	[more]
gi\|778695916\|ref\|XP_011654071.1\|	1.7e-36	96.47	PREDICTED: proton pump-interactor 1 [Cucumis sativus]	[more]
gi\|700199966\|gb\|KGN55124.1\|	1.7e-36	96.47	hypothetical protein Csa_4G637150 [Cucumis sativus]	[more]
gi\|659103061\|ref\|XP_008452453.1\|	1.7e-36	96.47	PREDICTED: proton pump-interactor 1 isoform X1 [Cucumis melo]	[more]
gi\|659103065\|ref\|XP_008452455.1\|	1.7e-36	96.47	PREDICTED: proton pump-interactor 1 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum
GO:0005886	plasma membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0010155	regulation of proton transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010155	regulation of proton transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026823T1	MELO3C026823T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 26..67 scor
None	No IPR available	PANTHER	PTHR32219	FAMILY NOT NAMED	coord: 1..85 score: 1.9
None	No IPR available	unknown	SSF57997	Tropomyosin	coord: 16..84 score: 1.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026823	Cucumber (Gy14) v2	cgybmeB312
MELO3C026823	Cucumber (Chinese Long) v3	cucmeB372
MELO3C026823	Wild cucumber (PI 183967)	cpimeB372