MELO3C012384 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012384
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ribulose bisphosphate carboxylase large chain
Location	chr10 : 811190 .. 814195 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGGACCATTAAATTTTTTTTATTTTCTTAGGAGTTTTAGTCTTCCAAATTGAACCAGATAAAGCAAAGGAGTTGCTTCCACAAGAGCTGGCCTCCAAAGTTTTAACAAGTGAATAATCAGAATTGTTTGTTTGGAAACATTTTGTAATTTAATACAAGTCACAGAGATAAGAAGAAGTCCTTGTTGATCAAGCAAGTCAAAATAAGAAACCACACAAGAAACAGAAAGATTAGGAAACAGATGGGGAATAAAATAATTAAGCTCAAGAATATCAAATGAAAAAGATAATCAACTTGAATAACTTTTTGCTTCCCTTTTATTTCCATCTACGTCACAATACCAAGTCATTAATGTAACCGAGGCGTATTGACAGCGTAAAATTATCGACCAGCTATTGCTTTGGCTTATTGACAAATGACAGACAAAAGGCTTGAGGTTAAGTTGACCAAGAATTAGTGCAAAAATGGTAGCCTCCCGGCAAACACAATTACAAATCTGGCATTGACCATTTCACAGAATTTAAAGATTGTGATCATCCATACAAAGACTCAAGGCCCAAATAAATATTGAAAAATACAGAGGGTTGAACTAAATTTCACCACGTTTGTACTTCCTATCCCCAAATACAATAACCATCCGATTGATCCTCAAGCAGATACCAAAACGAACTATTCCAAAATTAAAGGAAAAATAAATAATCTACCGAATCGATTGTATGTATCAGCCATCAATTTGTCCATTCCTCGTGACTGCGGTTAGCGATACCTTCAGCTGTCAGTGATGAAAATAGAAAACGAAAAATCGAACGTGAGAGTAAATATGAAAACAACTGGAAACTAATACTAAGTATCGTTTTTACTCGAAAAAATAGGAAGGAGGGAAAATTCAGGCTCGTGCTCCGACCACAATTATGACCGGCAACATGCTCCGACGACCACTTTTAGCGCCCAACTTCGACCATTGACCAACTTCGCTCCGGTGACGACGATCACCTCTAGCGATTATTTCCGACTGGACCACTTCCTATGATCAACTTCGACGGTCGATTTAATACTAAGTTAGTGTGATTGTTGACAAATACTTTAACTTTTTTTCTAAGATAATAATTATTTAAATTAAACACTTTTCCAATCACAAATTTGTTCATACAGTCAAATAATAAAAACACTTAGCATATAGTCAAATCAAACCAATTTGTGCATGAAAACACTTTAAAAAAATGTGCTACAAGACACATTTATATTTTGATTATGCGTGTATTATGCTAATATGTTACCTTGATTGTATCGTAATTTAGTTATTTGCATGAGACAATCATTGTATTTTGTCTATTGAACAATTGTTATATGTAAAAATCACAGGTAAAGGTTTTTATTTGACATCTGAGGACATATTTGGAGCTAAGAATGAAGTGGAATGAACCATGATAACCAACTTAGGATTATGATTAGAATTTAAAAAAGCTCATATGCTCCTACTATTCTTCAATCCCAAGGGTATTTAATTTGTTTCGAGGTTTGGAAAGTTCGTCGATCAACTTTCAGATACCACCTCTAGTGATCATCATTGGTCAATATCCAACCACGACTTCGAGTGAGTACACCAATGAACTTCCGATAACCAACTTCGACGATCACCACCAATCAATCCAATCAAGCCTGAAAAATTGTAATAAAAATATTTTGAGTACATGCAAAGAAATTGTATATCAAATACTTAAAAAATATATATTAAAACACATTTTTACTTTTATTTTAAGAAATTTTTATCAAGATGTTTAAATAAACTTTTGATTGCTTGTCCAATTAAACTATTTTATTAGTTTAAGGGCAAAAGATCTTTATAGTAAATTTTGCGTAAGTAACCATTACATTCATTTATTAGTTTTAATTAGTTGGAAGCATTAAAATAAACTATACTTAAATGTTACCTTTAATACAAAATTTATGAGCCTAAATGTTAATTAGTTAGAAAGATTTCCAAATCAAATAATTTGTGTGGGCCCTTGCCAAATGCCAACCTCATCCATGATCTATGTTGTTGCTATGAAATTTCAACCATGATTTGAGATCGACTTCATAGTTACGATTAAGCTCAACTTCGTTTATATGAACTATACTCCGACCAAATAAGAGTAAAAAAAGTCATAGTCCAACCAATTAGACTGCATAAAACTACCATGTAGGTTGTAACGTAACTCAATCACGCAATGTCTAAAAAGGAAAAAAAGTAGTATGAAGCTCCGCAAAATGAATAATATCGACCAAGTCGTGAAATGTTAACAACCACAATCATTCCATTTATAACGATGAAACACAAAGCCTTATTAGAATGAAAATCAGTAAAACTTTTCGGGAGATTTTTGATTCTCTAACTTAAAATTGGTCGGTGTTTACAATTATTTATAACCTACAATTATCGACAACTTTACTATTTCAAATCTCTCTTTATCATCGTACTTATTGTTTCTATTTCTAATTTATTTTCATTTTCTCTCATTGTTACAACGTTTACCATCTCCTATTCATATAAAAATATTATGCATCCCAAATACATATTATTATATTTTAGACTAAAATACCTACACCCATACCGAAACTATTATGATTTATAAAATACCCTTCAATGCTTCGAACGCCTCCGTAAAGTTTCAAATAAGTATAATCAAGAGTAAAAATATGATTATCGATATCAATTTATTGAAAACAATAGATCAATATAAATCCCAAATAGATGTTATTATATTGACGAATATATTCATCATCGAATAAAACAAAGCCCAATCTTGATTGTTACAAAGGACAATGCTATGGAATCAGCCTTGCTAGAGAAGAAAATCAATATATTGCTTATGTAGCTTATCCTCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGCATTTGGATTCAAGGTTCTACGTGCTTTACGACTAGAAGATTTGCGAATCCCTACCGCTTATATTAAAACTTTCTAA

mRNA sequence

ATGGGACAATGCTATGGAATCAGCCTTGCTAGAGAAGAAAATCAATATATTGCTTATGTAGCTTATCCTCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGCATTTGGATTCAAGGTTCTACGTGCTTTACGACTAGAAGATTTGCGAATCCCTACCGCTTATATTAAAACTTTCTAA

Coding sequence (CDS)

ATGGGACAATGCTATGGAATCAGCCTTGCTAGAGAAGAAAATCAATATATTGCTTATGTAGCTTATCCTCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGCATTTGGATTCAAGGTTCTACGTGCTTTACGACTAGAAGATTTGCGAATCCCTACCGCTTATATTAAAACTTTCTAA

Protein sequence

MGQCYGISLAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIPTAYIKTF*

Homology

[Close]

BLAST of MELO3C012384 vs. Swiss-Prot
Match: RBL_CUCSA (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus GN=rbcL PE=1 SV=5)

HSP 1 Score: 120.2 bits (300), Expect = 9.0e-27
Identity = 60/67 (89.55%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 82  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 141

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 142 TAYIKTF 148

[Close]

BLAST of MELO3C012384 vs. Swiss-Prot
Match: RBL_SOYBN (Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-26
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYG+  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 82  GRCYGLEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 141

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 142 TAYIKTF 148

[Close]

BLAST of MELO3C012384 vs. Swiss-Prot
Match: RBL_SESSE (Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban GN=rbcL PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-26
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 82  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 141

Query: 62  TAYIKTF 68
           T+YIKTF
Sbjct: 142 TSYIKTF 148

[Close]

BLAST of MELO3C012384 vs. Swiss-Prot
Match: RBL_ANTGA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthocleista grandiflora GN=rbcL PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.4e-26
Identity = 59/67 (88.06%), Postives = 59/67 (88.06%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +  EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 73  GRCYGIEPVPGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 132

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 133 TAYIKTF 139

[Close]

BLAST of MELO3C012384 vs. Swiss-Prot
Match: RBL_CUCPE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cucurbita pepo GN=rbcL PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.4e-26
Identity = 59/67 (88.06%), Postives = 59/67 (88.06%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +  EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 73  GRCYGIEPVPGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 132

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 133 TAYIKTF 139

[Close]

BLAST of MELO3C012384 vs. TrEMBL
Match: A1XX95_9ROSI (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Cucumis sacleuxii PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 64  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 123

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 124 TAYIKTF 130

[Close]

BLAST of MELO3C012384 vs. TrEMBL
Match: F5B3G7_9ROSI (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Coccinia ogadensis GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2  GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
          G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 2  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 61

Query: 62 TAYIKTF 68
          TAYIKTF
Sbjct: 62 TAYIKTF 68

[Close]

BLAST of MELO3C012384 vs. TrEMBL
Match: Q4KUF0_9ROSI (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Dalechampia spathulata GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 72  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 131

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 132 TAYIKTF 138

[Close]

BLAST of MELO3C012384 vs. TrEMBL
Match: A0A0U4FIB5_9ROSI (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Luffa graveolens GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 59  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 118

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 119 TAYIKTF 125

[Close]

BLAST of MELO3C012384 vs. TrEMBL
Match: T1QA22_9ROSI (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Tannodia swynnertonii GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 73  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 132

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 133 TAYIKTF 139

[Close]

BLAST of MELO3C012384 vs. TAIR10
Match: ATCG00490.1 (ATCG00490.1 ribulose-bisphosphate carboxylases)

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-23
Identity = 53/67 (79.10%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CY I  +  EE Q+IAYVAYPLDLFEEGSVTNMFTSIVGN FGFK L ALRLEDLRIP
Sbjct: 82  GRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALAALRLEDLRIP 141

Query: 62  TAYIKTF 68
            AY KTF
Sbjct: 142 PAYTKTF 148

[Close]

BLAST of MELO3C012384 vs. NCBI nr
Match: gi|62861184|gb|AAY16701.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Baliospermum montanum])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 72  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 131

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 132 TAYIKTF 138

[Close]

BLAST of MELO3C012384 vs. NCBI nr
Match: gi|459664253|gb|AGG79431.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Luffa aegyptiaca])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 37  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 96

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 97  TAYIKTF 103

[Close]

BLAST of MELO3C012384 vs. NCBI nr
Match: gi|302121099|gb|ADK92707.1| (ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis sp. A PMS-2010])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 64  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 123

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 124 TAYIKTF 130

[Close]

BLAST of MELO3C012384 vs. NCBI nr
Match: gi|480308631|gb|AGJ75765.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Crotonogyne strigosa])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 74  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 133

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 134 TAYIKTF 140

[Close]

BLAST of MELO3C012384 vs. NCBI nr
Match: gi|62861210|gb|AAY16714.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Tannodia cordifolia])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 1


Query: 2   GQCYGIS-LAREENQYIAYVAYPLDLFEEGSVTNMFTSIVGNAFGFKVLRALRLEDLRIP 61
           G+CYGI  +A EENQYIAYVAYPLDLFEEGSVTNMFTSIVGN FGFK LRALRLEDLRIP
Sbjct: 72  GRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIP 131

Query: 62  TAYIKTF 68
           TAYIKTF
Sbjct: 132 TAYIKTF 138

The following BLAST results are available for this feature:

BLAST of MELO3C012384 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL_CUCSA	9.0e-27	89.55	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus GN=rbcL PE=1 SV...	[more]
RBL_SOYBN	1.5e-26	88.06	Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3	[more]
RBL_SESSE	2.0e-26	88.06	Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban GN=rbcL PE=3 SV...	[more]
RBL_ANTGA	3.4e-26	88.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthocleista grandif...	[more]
RBL_CUCPE	3.4e-26	88.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cucurbita pepo GN=rb...	[more]

BLAST of MELO3C012384 vs. TrEMBL


Match Name	E-value	Identity	Description
A1XX95_9ROSI	1.0e-24	89.55	Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Cucu...	[more]
F5B3G7_9ROSI	1.0e-24	89.55	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Coccinia ogadensis G...	[more]
Q4KUF0_9ROSI	1.0e-24	89.55	Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Dale...	[more]
A0A0U4FIB5_9ROSI	1.0e-24	89.55	Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Luff...	[more]
T1QA22_9ROSI	1.0e-24	89.55	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Tannodia swynnertoni...	[more]

BLAST of MELO3C012384 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00490.1	2.2e-23	79.10	ATCG00490.1 ribulose-bisphosphate carboxylases	[more]

BLAST of MELO3C012384 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|62861184\|gb\|AAY16701.1\|	1.4e-24	89.55	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]
gi\|459664253\|gb\|AGG79431.1\|	1.4e-24	89.55	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Luffa ae...	[more]
gi\|302121099\|gb\|ADK92707.1\|	1.4e-24	89.55	ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]
gi\|480308631\|gb\|AGJ75765.1\|	1.4e-24	89.55	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]
gi\|62861210\|gb\|AAY16714.1\|	1.4e-24	89.55	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017443	RuBisCO_lsu_fd_N

Vocabulary: **Biological Process**
Term	Definition
GO:0015977	carbon fixation

Vocabulary: **Molecular Function**
Term	Definition
GO:0016984	ribulose-bisphosphate carboxylase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0015977	carbon fixation
cellular_component	GO:0009573	chloroplast ribulose bisphosphate carboxylase complex
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012384T1	MELO3C012384T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	GENE3D	G3DSA:3.30.70.150		coord: 2..67 score: 6.8
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 2..63 score: 7.3
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	unknown	SSF54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 3..67 score: 1.96
None	No IPR available	PANTHER	PTHR23321	RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR	coord: 2..67 score: 1.0
None	No IPR available	PANTHER	PTHR23321:SF31	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED	coord: 2..67 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012384	Silver-seed gourd	carmeB0489
MELO3C012384	Silver-seed gourd	carmeB0684
MELO3C012384	Silver-seed gourd	carmeB0834
MELO3C012384	Cucumber (Chinese Long) v3	cucmeB381
MELO3C012384	Watermelon (97103) v2	mewmbB060
MELO3C012384	Watermelon (97103) v2	mewmbB071
MELO3C012384	Wax gourd	mewgoB062
MELO3C012384	Wax gourd	mewgoB081
MELO3C012384	Melon (DHL92) v3.5.1	memeB030
MELO3C012384	Cucumber (Gy14) v1	cgymeB508
MELO3C012384	Cucumber (Gy14) v1	cgymeB628
MELO3C012384	Cucurbita maxima (Rimu)	cmameB351
MELO3C012384	Cucurbita maxima (Rimu)	cmameB640
MELO3C012384	Cucurbita maxima (Rimu)	cmameB662
MELO3C012384	Cucurbita moschata (Rifu)	cmomeB344
MELO3C012384	Cucurbita moschata (Rifu)	cmomeB631
MELO3C012384	Cucurbita moschata (Rifu)	cmomeB652
MELO3C012384	Wild cucumber (PI 183967)	cpimeB369
MELO3C012384	Cucumber (Chinese Long) v2	cumeB377
MELO3C012384	Watermelon (Charleston Gray)	mewcgB062
MELO3C012384	Watermelon (Charleston Gray)	mewcgB072
MELO3C012384	Watermelon (97103) v1	mewmB047
MELO3C012384	Watermelon (97103) v1	mewmB061
MELO3C012384	Watermelon (97103) v1	mewmB070
MELO3C012384	Cucurbita pepo (Zucchini)	cpemeB024
MELO3C012384	Cucurbita pepo (Zucchini)	cpemeB363
MELO3C012384	Cucurbita pepo (Zucchini)	cpemeB385
MELO3C012384	Bottle gourd (USVL1VR-Ls)	lsimeB281
MELO3C012384	Bottle gourd (USVL1VR-Ls)	lsimeB463
MELO3C012384	Cucumber (Gy14) v2	cgybmeB319
MELO3C012384	Cucumber (Gy14) v2	cgybmeB363