WMU79718 (transcribed_cluster) Watermelon (97103) v1

NameWMU79718
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCold-regulated protein, putative
LocationChr5 : 12012178 .. 12012629 (+)
Sequence length450
The following sequences are available for this feature:

transcribed_cluster sequence

ACATTTCCTCACTCTCGGCGTTAAAATCGGTGAATTTGTCCTCTTCCACTTCTTCGTTAAACTCCGTCGTGCTCCGGCGAATGGCTGTTGGAATCGGCGTTCCGATCTGCATTGAATGTGGGACCCACAGCAATCCGTGCAGGTGCAAGGTGGTGGGACCGACCTTGGGGTTCTTGGCTTTCGCTGTGGCGGCGATGGTGGAGTGGCCGGTCGGAGCTCTGGTTTACTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCCACCGTCGTTTTCCCGTCGGTGTCTAACGCGGTTCCTATTTGAGAGAATACGCACCTAATGCGTTTCCTTAACATGTTTCTTTTTCTTTTTCTTTTTTTTTTCTTTTTCTTTTTTTCCCCTTCTTTCTGTTGAATGTATATTAATAATGCATGTCAATGTAAACTAAAAACAATAGTCT
BLAST of WMU79718 vs. TAIR10
Match: AT3G03341.1 (AT3G03341.1 unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-27
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 3

Query: 99  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRIMAHPATV 158
           +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALVY F+H KGRRIM HPAT 
Sbjct: 2   IPICVQCGTGGNPCRCKVVGPTLGLVAFVAAGIVEWPVGALVYIFKHAKGRRIMGHPATH 61

Query: 159 VFPSVSNAVPI 218
           V+P VS ++PI
Sbjct: 62  VYPKVSRSIPI 72

Query: 219 278
           
Sbjct: 122 72

Query: 279 312
           
Sbjct: 182 72

BLAST of WMU79718 vs. NCBI nr
Match: gi|659114483|ref|XP_008457074.1| (PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 9.4e-37
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 3

Query: 81  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRIM 140
           MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRHHKGRRIM
Sbjct: 1   MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 141 AHPATVVFPSVSNAVPI 200
           AHPATVV+PSVSNA+PI
Sbjct: 61  AHPATVVYPSVSNAIPI 77

Query: 201 260
           
Sbjct: 121 77

Query: 261 312
           
Sbjct: 181 77

BLAST of WMU79718 vs. NCBI nr
Match: gi|449466446|ref|XP_004150937.1| (PREDICTED: uncharacterized protein LOC101215398 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-36
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 3

Query: 81  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRIM 140
           M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRHHKGRRIM
Sbjct: 1   MGVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 141 AHPATVVFPSVSNAVPI 200
           AHPATVV+PSVSNAVPI
Sbjct: 61  AHPATVVYPSVSNAVPI 77

Query: 201 260
           
Sbjct: 121 77

Query: 261 312
           
Sbjct: 181 77

BLAST of WMU79718 vs. NCBI nr
Match: gi|769814026|ref|XP_011622765.1| (PREDICTED: uncharacterized protein LOC105420519 [Amborella trichopoda])

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 65/78 (83.33%), Postives = 73/78 (93.59%), Query Frame = 3

Query: 78  RMAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRI 137
           R+AVG+GVPIC++CGTHSNPCRCKVVGPTLGFLAFA AA+VEWPVGA+VY FRH  GRRI
Sbjct: 36  RIAVGVGVPICVQCGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGAVVYLFRHMTGRRI 95

Query: 138 MAHPATVVFPSVSNAVPI 197
           MAHP TVV+PSVSNA+PI
Sbjct: 96  MAHPVTVVYPSVSNAIPI 113

Query: 198 257
           
Sbjct: 156 113

Query: 258 312
           
Sbjct: 216 113

BLAST of WMU79718 vs. NCBI nr
Match: gi|702374339|ref|XP_010062235.1| (PREDICTED: uncharacterized protein LOC104449694 [Eucalyptus grandis])

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 3

Query: 81  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRIM 140
           MA+GIG+PIC++CGT SNPCRCKVVGPT+GFLAFA AA+VEWPVGALVYCFRH KGRRIM
Sbjct: 1   MALGIGIPICVQCGTTSNPCRCKVVGPTVGFLAFAAAAVVEWPVGALVYCFRHGKGRRIM 60

Query: 141 AHPATVVFPSVSNAVPI 200
           AHPATVV+PSV NA+PI
Sbjct: 61  AHPATVVYPSVINAIPI 77

Query: 201 260
           
Sbjct: 121 77

Query: 261 312
           
Sbjct: 181 77

BLAST of WMU79718 vs. NCBI nr
Match: gi|225453138|ref|XP_002273470.1| (PREDICTED: uncharacterized protein LOC100246645 [Vitis vinifera])

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 3

Query: 81  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAMVEWPVGALVYCFRHHKGRRIM 140
           M  G+ +P+C++CGTHSNPCRCKVVGPTLGFLAFAVAA+VEWPVGALVYCFRH KGRRIM
Sbjct: 1   MTAGVRIPLCVQCGTHSNPCRCKVVGPTLGFLAFAVAAIVEWPVGALVYCFRHMKGRRIM 60

Query: 141 AHPATVVFPSVSNAVPI 200
           AHPA VV+PSVSNA PI
Sbjct: 61  AHPAAVVYPSVSNAFPI 77

Query: 201 260
           
Sbjct: 121 77

Query: 261 312
           
Sbjct: 181 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G03341.13.2e-2770.42 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659114483|ref|XP_008457074.1|9.4e-3793.51PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo][more]
gi|449466446|ref|XP_004150937.1|1.6e-3694.81PREDICTED: uncharacterized protein LOC101215398 [Cucumis sativus][more]
gi|769814026|ref|XP_011622765.1|1.1e-3283.33PREDICTED: uncharacterized protein LOC105420519 [Amborella trichopoda][more]
gi|702374339|ref|XP_010062235.1|1.4e-3284.42PREDICTED: uncharacterized protein LOC104449694 [Eucalyptus grandis][more]
gi|225453138|ref|XP_002273470.1|2.4e-3283.12PREDICTED: uncharacterized protein LOC100246645 [Vitis vinifera][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013169Cla013169gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
WMN78A09WMN78A09EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34673FAMILY NOT NAMEDcoord: 27..104
score: 2.6