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The following sequences are available for this feature:
transcribed_cluster sequence GAGAAAAAAAGGCGTGAAGCAGAGTTGAAGAAGTTAGAAGAAGATGAAGCGAGGAGGTTGGAAGAATTAATTCAGAAGAATGTTCAAGAAATATTAAACTCTGAAGAGACTAGATTAGAAATAGAGAGGCGAGTAGAGGAAGGTCGCAAGAAATTGTTTGATGCTGTTGATGTGCAACTTGCGAAAGAGAAAGAGGCCGCTCTTACTGCTGCAAGACAGAAAGAAGAACAAGCCCGAAAAGAGAGAGAAGAGCTAGATAGAATGTTAGAGGAGAATAGGAGAAGGGTAGAAGAAGCTCAGCAAAGAGAAGCTCTGGAGCTGCAGCGGAAGGAAGAAGAACGATATCGTGAACTGGAGCTGATCCAGAGACAAAAGGAGGAGGCCGCTCGGAGGAAAAAGCTGGATCAGGGAGAAGAGAGAACTTAGAACGTAGAGCTTATTGTGGGCAAGAGTGTGTGATCTAGTAGATGAAATATGGTACGTCCATGGTTTCCTGACCCGTAGAATGGTGAACCAAAAAGCTGATAATTTTTGTTCAATGTTATTTTGGGGTATTGGCCTACTATGCATTTTGTTGGTTCTTCGGCTCCCTTTGAGTGTCTGTTTCGTGGTTGTTCTATGACTTGGGTGACACATGAATTTTGGGCAGTTGATTTGTTATTGATCTCAACTCTTTCTATCAT
BLAST of WMU79542 vs. NCBI nr
Match: gi|659121818|ref|XP_008460829.1| (PREDICTED: uncharacterized protein At1g10890-like [Cucumis melo]) HSP 1 Score: 87.8 bits (216), Expect = 2.6e-14 Identity = 58/118 (49.15%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 70 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQXXXXXXXXXXXXXXXXXXXXXXXX 129
IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQ
Sbjct: 135 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQLAKEKEAALTAARQKEEQARKERE 194
Query: 130 XLDRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEAARRKKLDQGEERT 189
LDRML KEEAARRKKLDQGEERT
Sbjct: 195 ELDRMLEENRRRVEEAQQREALELQRKEEERYRELELIQRQKEEAARRKKLDQGEERT 252
Query: 190 249
Sbjct: 255 252
Query: 250 309
Sbjct: 315 252
Query: 310 369
Sbjct: 375 252
Query: 370 424
Sbjct: 435 252
BLAST of WMU79542 vs. NCBI nr
Match: gi|449459174|ref|XP_004147321.1| (PREDICTED: uncharacterized protein At1g10890 [Cucumis sativus]) HSP 1 Score: 84.3 bits (207), Expect = 2.9e-13 Identity = 56/118 (47.46%), Postives = 57/118 (48.31%), Query Frame = 1
Query: 70 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQXXXXXXXXXXXXXXXXXXXXXXXX 129
IQKNVQEIL SEETRLEIERRVEEGRKKLFDAVD+Q
Sbjct: 135 IQKNVQEILKSEETRLEIERRVEEGRKKLFDAVDLQLAKEKEAALTAARQKEEQARKERE 194
Query: 130 XLDRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEAARRKKLDQGEERT 189
LDRML KEEAARRKKLDQGEERT
Sbjct: 195 ELDRMLEENRRRVEEAQQREALELQRKEEERYRELELIQRQKEEAARRKKLDQGEERT 252
Query: 190 249
Sbjct: 255 252
Query: 250 309
Sbjct: 315 252
Query: 310 369
Sbjct: 375 252
Query: 370 424
Sbjct: 435 252
BLAST of WMU79542 vs. NCBI nr
Match: gi|703111059|ref|XP_010099764.1| (hypothetical protein L484_010951 [Morus notabilis]) HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06 Identity = 43/124 (34.68%), Postives = 54/124 (43.55%), Query Frame = 1
Query: 70 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQXXXXXXXXXXXXXXXXXXXXXXXX 129
I+KNV+E + SEE +LEIERR+EEGRKKLFD V Q
Sbjct: 128 IRKNVEERMRSEEVKLEIERRIEEGRKKLFDDVAAQLEKEKEAALIEARQKEEQARKERE 187
Query: 130 XLDRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEAARRKKLDQGEERT*N 189
LD+ML KEEAARRKKL++ EER
Sbjct: 188 ELDKMLKENQRRVEESQRREALEQQRKEEERHRELELIQRQKEEAARRKKLEEEEERAKE 247
Query: 190 VELI 249
++L+
Sbjct: 248 MKLL 251
Query: 250 309
Sbjct: 308 251
Query: 310 369
Sbjct: 368 251
Query: 370 429
Sbjct: 428 251
Query: 430 442
Sbjct: 488 251
BLAST of WMU79542 vs. NCBI nr
Match: gi|823166957|ref|XP_012483429.1| (PREDICTED: uncharacterized protein At1g10890-like [Gossypium raimondii]) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06 Identity = 45/128 (35.16%), Postives = 54/128 (42.19%), Query Frame = 1
Query: 70 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQXXXXXXXXXXXXXXXXXXXXXXXX 129
IQKNV+E LNSE+ +L+IERRV EGRKKLFD V Q
Sbjct: 107 IQKNVEERLNSEDVKLDIERRVVEGRKKLFDDVSTQLQKEKESALAEARLKQEQARRERE 166
Query: 130 XLDRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEAARRKKLDQGEERT*N 189
LD+ML KEEAARRKKL++ EE
Sbjct: 167 ELDKMLEENKRRVEEAQRREALEQQRKEEERYRELEMIQRQKEEAARRKKLEEEEEHAKQ 226
Query: 190 VELIVGKS 249
++L KS
Sbjct: 227 MKLGKNKS 234
Query: 250 309
Sbjct: 287 234
Query: 310 369
Sbjct: 347 234
Query: 370 429
Sbjct: 407 234
Query: 430 454
Sbjct: 467 234
BLAST of WMU79542 vs. NCBI nr
Match: gi|728830215|gb|KHG09658.1| (hypothetical protein F383_11093 [Gossypium arboreum]) HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06 Identity = 45/128 (35.16%), Postives = 54/128 (42.19%), Query Frame = 1
Query: 70 IQKNVQEILNSEETRLEIERRVEEGRKKLFDAVDVQXXXXXXXXXXXXXXXXXXXXXXXX 129
IQKNV+E LNSE+ +L+IERRV EGRKKLFD V Q
Sbjct: 111 IQKNVEERLNSEDVKLDIERRVVEGRKKLFDDVTTQLQKEKESALAEARLKQEQAQKERE 170
Query: 130 XLDRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEAARRKKLDQGEERT*N 189
LD+ML KEEAARRKKL++ EE
Sbjct: 171 ELDKMLEENKRRVEEAQRREALEQQRKEEERYRELEMIQRQKEEAARRKKLEEEEEHAKQ 230
Query: 190 VELIVGKS 249
++L KS
Sbjct: 231 MKLGKNKS 238
Query: 250 309
Sbjct: 291 238
Query: 310 369
Sbjct: 351 238
Query: 370 429
Sbjct: 411 238
Query: 430 454
Sbjct: 471 238
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
| Term | Definition |
|---|
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
| Feature Name | Unique Name | Type |
|---|
| WMN57H12 | WMN57H12 | EST |
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | unknown | Coil | Coil | coord: 61..127
score: -coord: 2..37
scor |
| None | No IPR available | PANTHER | PTHR31711:SF2 | SUBFAMILY NOT NAMED | coord: 1..141
score: 3.6 |
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