WMU79411 (transcribed_cluster) Watermelon (97103) v1

NameWMU79411
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 11169454 .. 11169984 (-)
Sequence length530
The following sequences are available for this feature:

transcribed_cluster sequence

CTCCTACTTTAGTTATCTCATTCTCGATCTCAATGGCTTCGTCTCTTAAGCCATCCATCTCTTGGTTAAAATTCTTGTAGGAATTCTGAAGCATTTCCATTCCTTCCTCCAAACTTCTTCTCAGCTCCAACTGAGCTTCTTGAAGTTCCAACTTTGGAAGTCTCGATCCTTCTGGATTGTTCATAAACTTCTTCTGAGTGGTTTAGCACAGTGTCCATGTGATCTTCTAGTTTCCTTGACATTTGAGCCGCTTGTTGTATTTGAATACCAGTAGTTTTCAAGGAATCAGAAATGTGGTATGAATTTTGCAACAGAGATTCCGACCTTTCCTCAATCATTTCTAACTTGGCTTCTGCAGATTCGGAAGATCTCTTCAACTCATTCACCAGTCTCTCCGTTTCATGCTTGAACGCATGAGCCCTGGAAACAATACCAAAATCATGTGGAGATGATGCTAATTTCATAAGAAGTTAGATGAAAAATAAGATATGATACTCATTACTCACTGTAGCTTAGAACTCAAGATAGAT
BLAST of WMU79411 vs. TAIR10
Match: AT5G55490.1 (AT5G55490.1 gamete expressed protein 1)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 31/91 (34.07%), Postives = 58/91 (63.74%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +++AFK+E ERLVNELK +++  E KL+++E +S++L+Q S  I DSL +  +++Q  A 
Sbjct: 160 QSNAFKNEIERLVNELKNTAQYTEDKLDILESKSDALIQTSSMIHDSLGSLDVRVQNVAS 219

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
           ++  LE  +  +   + E+ ++ + I  S++
Sbjct: 220 VTNTLETSVSGLSQQTVEISQEQKNIAESQL 250

Query: 270 329
           
Sbjct: 280 250

Query: 330 389
           
Sbjct: 340 250

Query: 390 423
           
Sbjct: 400 250

BLAST of WMU79411 vs. Swiss-Prot
Match: GEX1_ARATH (Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana GN=GEX1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-10
Identity = 31/91 (34.07%), Postives = 58/91 (63.74%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +++AFK+E ERLVNELK +++  E KL+++E +S++L+Q S  I DSL +  +++Q  A 
Sbjct: 160 QSNAFKNEIERLVNELKNTAQYTEDKLDILESKSDALIQTSSMIHDSLGSLDVRVQNVAS 219

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
           ++  LE  +  +   + E+ ++ + I  S++
Sbjct: 220 VTNTLETSVSGLSQQTVEISQEQKNIAESQL 250

Query: 270 329
           
Sbjct: 280 250

Query: 330 389
           
Sbjct: 340 250

Query: 390 423
           
Sbjct: 400 250

BLAST of WMU79411 vs. NCBI nr
Match: gi|778688567|ref|XP_011652779.1| (PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           RAHAFKHETERLVNELKRSSESAEAKLE+IEERSESLLQNSYHISDSL+TTGIQIQQ AQ
Sbjct: 61  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 120

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
            SRKLEDHM  VL+HSE+VYEQSRR+ETS++
Sbjct: 121 TSRKLEDHMGAVLHHSEKVYEQSRRMETSQL 151

Query: 270 329
           
Sbjct: 181 151

Query: 330 389
           
Sbjct: 241 151

Query: 390 423
           
Sbjct: 301 151

BLAST of WMU79411 vs. NCBI nr
Match: gi|700202340|gb|KGN57473.1| (hypothetical protein Csa_3G194400 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-33
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +AHAFKHETERLVNELKRSSESAEAKLE+IEERSESLLQNSYHISDSL+TTGIQIQQ AQ
Sbjct: 119 KAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 178

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
            SRKLEDHM  VL+HSE+VYEQSRR+ETS++
Sbjct: 179 TSRKLEDHMGAVLHHSEKVYEQSRRMETSQL 209

Query: 270 329
           
Sbjct: 239 209

Query: 330 389
           
Sbjct: 299 209

Query: 390 423
           
Sbjct: 359 209

BLAST of WMU79411 vs. NCBI nr
Match: gi|659108741|ref|XP_008454365.1| (PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 9.4e-28
Identity = 70/91 (76.92%), Postives = 81/91 (89.01%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +A+AFKH+TERLVNELKRSSE+AE KLE IEE+SESLLQNSY ISDSLK+TG QIQ+ AQ
Sbjct: 152 QANAFKHDTERLVNELKRSSEAAEGKLESIEEKSESLLQNSYEISDSLKSTGTQIQKMAQ 211

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
            SRKLEDHM  VL HSE VYEQS++IETS++
Sbjct: 212 TSRKLEDHMGVVLKHSEAVYEQSKKIETSQL 242

Query: 270 329
           
Sbjct: 272 242

Query: 330 389
           
Sbjct: 332 242

Query: 390 423
           
Sbjct: 392 242

BLAST of WMU79411 vs. NCBI nr
Match: gi|449469316|ref|XP_004152367.1| (PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 7.5e-25
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +A+AFK +TERLVNELKRSSE+AE KLE IEE+SE+LLQ+SY ISDSL +TG QIQ+ AQ
Sbjct: 152 QANAFKLDTERLVNELKRSSEAAEGKLESIEEKSETLLQSSYEISDSLNSTGTQIQKMAQ 211

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
            SRKLEDHM  VL HSE VYEQS++IETS++
Sbjct: 212 TSRKLEDHMGIVLKHSEAVYEQSKKIETSQL 242

Query: 270 329
           
Sbjct: 272 242

Query: 330 389
           
Sbjct: 332 242

Query: 390 423
           
Sbjct: 392 242

BLAST of WMU79411 vs. NCBI nr
Match: gi|700197637|gb|KGN52795.1| (hypothetical protein Csa_4G001620 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 7.5e-25
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = -1

Query: 150 RAHAFKHETERLVNELKRSSESAEAKLEMIEERSESLLQNSYHISDSLKTTGIQIQQAAQ 209
           +A+AFK +TERLVNELKRSSE+AE KLE IEE+SE+LLQ+SY ISDSL +TG QIQ+ AQ
Sbjct: 152 QANAFKLDTERLVNELKRSSEAAEGKLESIEEKSETLLQSSYEISDSLNSTGTQIQKMAQ 211

Query: 210 MSRKLEDHMDTVLNHSEEVYEQSRRIETSKV 269
            SRKLEDHM  VL HSE VYEQS++IETS++
Sbjct: 212 TSRKLEDHMGIVLKHSEAVYEQSKKIETSQL 242

Query: 270 329
           
Sbjct: 272 242

Query: 330 389
           
Sbjct: 332 242

Query: 390 423
           
Sbjct: 392 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G55490.12.2e-1134.07 gamete expressed protein 1[more]
Match NameE-valueIdentityDescription
GEX1_ARATH4.0e-1034.07Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana GN=GEX1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
gi|778688567|ref|XP_011652779.1|1.5e-3387.91PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus][more]
gi|700202340|gb|KGN57473.1|3.3e-3386.81hypothetical protein Csa_3G194400 [Cucumis sativus][more]
gi|659108741|ref|XP_008454365.1|9.4e-2876.92PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis melo][more]
gi|449469316|ref|XP_004152367.1|7.5e-2572.53PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis sativus][more]
gi|700197637|gb|KGN52795.1|7.5e-2572.53hypothetical protein Csa_4G001620 [Cucumis sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013122Cla013122gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
WMN44A03WMN44A03EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 20..54
score: -coord: 115..149
scor
NoneNo IPR availableGENE3DG3DSA:1.20.58.70coord: 16..94
score: 4.