WMU79381 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU79381
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionSeipin
LocationChr3 : 15927979 .. 15928572 (+)
Sequence length588
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GCAGAGTTGATATCAACAAGTGGAAACATAATAGCCAGTTCAAGCCAACCCTGCATGCTCCGGTTCAGAAGCACACCGGTCCGGTTCGCCCGAACTGTCCTTACTAGCTTTCCTCTACTCTTGGGAATCTGGACCGAATCCCAAAAGCTAAGTTTCCCCATACTAAAGCACAAGGAAGAAAATCAGGAACGAAGCGCATTTATCCAAGTTACCATAAGCCCTCGCATTGGAACATCGGCCCTCCCGGAGCTATACGAAGCTCATATTCTAATAAACTCAAAACTACCAAAGACAAAAGAGTTGTTGGGTCGCTGGCGATGGACTTGCTTCCTATGGACATCTCTCTATTTGTATCTGATGTTTGTAGTGATGTTTATGTTCTTTTGGAAGCCAGTTGTGTTTGGGGGAATGAGCTTGGCGGAGTTGAGTGGGATGGATAAAGGAGGTCCAACGAGCAAGGAAGCGGAGGAGTCGGAGATAACGGTGGAGTTGTTGAGAAAATGGCAAGAGATGAGGAGGAAGAGAAAGGCTGCCATGTTATGGAGAAGTAGATGTTGGGTCCACATCCGAGTCCAGCATTAGTTGTAG
Homology
[Close]
BLAST of WMU79381 vs. TAIR10
Match: AT5G16460.1 (AT5G16460.1 Putative adipose-regulatory protein (Seipin))

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           EL+S  G  IA SSQPCMLRFRS P+R ART + S PL+ GI  E+Q +    LKH +E 
Sbjct: 186 ELLSLKGETIARSSQPCMLRFRSKPIRLARTFVMSVPLIAGIANEAQTMRIDALKH-QEK 245

Query: 64  QERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXXX 123
             R+  ++ T+ PR  T  LP+LYEA I+INSK P  K +   W+WT  +WTS       
Sbjct: 246 MPRTKAVRATLIPRAQTRTLPQLYEAEIVINSKPPWIKRMAYNWKWTLCVWTSMYLYVAI 305

Query: 124 XXXXXXXWKPVVFGGMSLAELSGMDKGGPTSKEAEESEITVELLRKWQEMRRKRK 183
                  ++PV+F   S   +S          E+E  EI V    + Q M R+R+
Sbjct: 306 LTALLWCFRPVLFPYTSSRTIS----------ESENLEIEVVEEEQEQVMERRRR 349

Query: 184  243
           
Sbjct: 366  349

Query: 244  303
           
Sbjct: 426  349

Query: 304  363
           
Sbjct: 486  349

Query: 364  423
           
Sbjct: 546  349

Query: 424  483
           
Sbjct: 606  349

Query: 484  529
           
Sbjct: 666  349

[Close]
BLAST of WMU79381 vs. TAIR10
Match: AT2G34380.1 (AT2G34380.1 Putative adipose-regulatory protein (Seipin))

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15
Identity = 40/116 (34.48%), Postives = 69/116 (59.48%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           + +S SG+++ASS +PCM++F S P+R  +T+L   PL+ G  +E Q L+  +    E++
Sbjct: 345 DFLSASGHVLASSRRPCMVKFSSEPIRLVQTLLKIAPLVTGYVSEIQTLNLKLKGLVEKD 404

Query: 64  QERSAFIQVTISPRI---GTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTS 123
              +A +++ I  R      + +PE+Y+A + + SKLP  K ++  WR T F+W S
Sbjct: 405 IIPTACLKIMIEQRAEFRPGAGIPEIYDASLFLESKLPFLKRIIWNWRKTLFVWIS 460

Query: 124  183
           
Sbjct: 465  460

Query: 184  243
           
Sbjct: 525  460

Query: 244  303
           
Sbjct: 585  460

Query: 304  343
           
Sbjct: 645  460

[Close]
BLAST of WMU79381 vs. TAIR10
Match: AT1G29760.1 (AT1G29760.1 Putative adipose-regulatory protein (Seipin))

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           + +S  G  IAS  +PCMLRFRS P+R  +T     PL+ G  +E Q LS   LK   E 
Sbjct: 374 DFLSVDGQTIASIRRPCMLRFRSEPIRLVQTFFKVVPLVTGYVSEIQTLSLK-LKGFVEK 433

Query: 64  QERSAFIQVTISPRI---GTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTS 123
              +A +++ I  R      + +PELY+A + + S LP  ++++ +WR T F+W S
Sbjct: 434 DIPTACLKIIIEQRAEFRPGAGIPELYDASLSVESGLPFFRKIIWKWRKTLFVWIS 488

Query: 124  183
           
Sbjct: 494  488

Query: 184  243
           
Sbjct: 554  488

Query: 244  303
           
Sbjct: 614  488

Query: 304  343
           
Sbjct: 674  488

[Close]
BLAST of WMU79381 vs. Swiss-Prot
Match: SEI1_ARATH (Seipin-1 OS=Arabidopsis thaliana GN=SEI1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.9e-27
Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           EL+S  G  IA SSQPCMLRFRS P+R ART + S PL+ GI  E+Q +    LKH +E 
Sbjct: 186 ELLSLKGETIARSSQPCMLRFRSKPIRLARTFVMSVPLIAGIANEAQTMRIDALKH-QEK 245

Query: 64  QERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXXX 123
             R+  ++ T+ PR  T  LP+LYEA I+INSK P  K +   W+WT  +WTS       
Sbjct: 246 MPRTKAVRATLIPRAQTRTLPQLYEAEIVINSKPPWIKRMAYNWKWTLCVWTSMYLYVAI 305

Query: 124 XXXXXXXWKPVVFGGMSLAELSGMDKGGPTSKEAEESEITVELLRKWQEMRRKRK 183
                  ++PV+F   S   +S          E+E  EI V    + Q M R+R+
Sbjct: 306 LTALLWCFRPVLFPYTSSRTIS----------ESENLEIEVVEEEQEQVMERRRR 349

Query: 184  243
           
Sbjct: 366  349

Query: 244  303
           
Sbjct: 426  349

Query: 304  363
           
Sbjct: 486  349

Query: 364  423
           
Sbjct: 546  349

Query: 424  483
           
Sbjct: 606  349

Query: 484  529
           
Sbjct: 666  349

[Close]
BLAST of WMU79381 vs. Swiss-Prot
Match: SEI3_ARATH (Seipin-3 OS=Arabidopsis thaliana GN=SEI3 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.3e-14
Identity = 40/116 (34.48%), Postives = 69/116 (59.48%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           + +S SG+++ASS +PCM++F S P+R  +T+L   PL+ G  +E Q L+  +    E++
Sbjct: 345 DFLSASGHVLASSRRPCMVKFSSEPIRLVQTLLKIAPLVTGYVSEIQTLNLKLKGLVEKD 404

Query: 64  QERSAFIQVTISPRI---GTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTS 123
              +A +++ I  R      + +PE+Y+A + + SKLP  K ++  WR T F+W S
Sbjct: 405 IIPTACLKIMIEQRAEFRPGAGIPEIYDASLFLESKLPFLKRIIWNWRKTLFVWIS 460

Query: 124  183
           
Sbjct: 465  460

Query: 184  243
           
Sbjct: 525  460

Query: 244  303
           
Sbjct: 585  460

Query: 304  343
           
Sbjct: 645  460

[Close]
BLAST of WMU79381 vs. Swiss-Prot
Match: SEI2_ARATH (Seipin-2 OS=Arabidopsis thaliana GN=SEI2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.6e-13
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1 

Query: 4   ELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEEN 63
           + +S  G  IAS  +PCMLRFRS P+R  +T     PL+ G  +E Q LS   LK   E 
Sbjct: 374 DFLSVDGQTIASIRRPCMLRFRSEPIRLVQTFFKVVPLVTGYVSEIQTLSLK-LKGFVEK 433

Query: 64  QERSAFIQVTISPRI---GTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTS 123
              +A +++ I  R      + +PELY+A + + S LP  ++++ +WR T F+W S
Sbjct: 434 DIPTACLKIIIEQRAEFRPGAGIPELYDASLSVESGLPFFRKIIWKWRKTLFVWIS 488

Query: 124  183
           
Sbjct: 494  488

Query: 184  243
           
Sbjct: 554  488

Query: 244  303
           
Sbjct: 614  488

Query: 304  343
           
Sbjct: 674  488

[Close]
BLAST of WMU79381 vs. NCBI nr
Match: gi|659085951|ref|XP_008443693.1| (PREDICTED: uncharacterized protein LOC103487228 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 7.7e-63
Identity = 133/187 (71.12%), Postives = 145/187 (77.54%), Query Frame = 1 

Query: 1   AELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEE 60
           AELIST+GNII SSSQPCMLRFRS PVRFART+LTSFP+L+GI TE+Q+LSFPILKHKEE
Sbjct: 193 AELISTNGNIITSSSQPCMLRFRSAPVRFARTLLTSFPILIGISTEAQRLSFPILKHKEE 252

Query: 61  NQERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXX 120
           NQERSA IQ TISPRIGTSALPELYEAHI+INSKLP+ KELL RWRWTCFLWTS      
Sbjct: 253 NQERSAAIQFTISPRIGTSALPELYEAHIVINSKLPRMKELLRRWRWTCFLWTSIYLYLM 312

Query: 121 XXXXXXXXWKPVVFGGMSLA-ELSGMDKG-------GPTSKEAEESEITVELLRKWQEMR 180
                   WKPV+F  M+L  ELS  D+        G      E +EITVELLRKWQEMR
Sbjct: 313 FLAIFMLFWKPVMFRAMTLTPELSDFDQDPRRRELEGADESLDEMAEITVELLRKWQEMR 372

Query: 181 RKRKAAM 240
           RKRKAAM
Sbjct: 373 RKRKAAM 379

Query: 241  300
           
Sbjct: 433  379

Query: 301  360
           
Sbjct: 493  379

Query: 361  420
           
Sbjct: 553  379

Query: 421  480
           
Sbjct: 613  379

Query: 481  538
           
Sbjct: 673  379

[Close]
BLAST of WMU79381 vs. NCBI nr
Match: gi|449442797|ref|XP_004139167.1| (PREDICTED: uncharacterized protein LOC101206366 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 124/189 (65.61%), Postives = 142/189 (75.13%), Query Frame = 1 

Query: 1   AELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEE 60
           AELIST+GN+I SSSQPCMLRFRS PVR ART++TSFP+L+GI +E+Q+LSFPIL+HKEE
Sbjct: 191 AELISTNGNVITSSSQPCMLRFRSAPVRLARTIITSFPVLVGISSEAQRLSFPILEHKEE 250

Query: 61  NQERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXX 120
            QERSA IQVTISPRIGTSALPELYEA ILINSK PK KELL RW+WTCF+WTS      
Sbjct: 251 KQERSAAIQVTISPRIGTSALPELYEADILINSKPPKMKELLRRWQWTCFVWTSMYLYLM 310

Query: 121 XXXXXXXXWKPVVFGGMSLAE---LSGMDKG-------GPTSKEAEESEITVELLRKWQE 180
                   WKPV+F  M+L     +  +D+        G  S   E +EITVELLRKWQE
Sbjct: 311 FVVMFMFFWKPVMFRAMTLRPHQLIRDLDQDPRRREVEGDESSLDEMAEITVELLRKWQE 370

Query: 181 MRRKRKAAM 240
           MRRKRKAAM
Sbjct: 371 MRRKRKAAM 379

Query: 241  300
           
Sbjct: 431  379

Query: 301  360
           
Sbjct: 491  379

Query: 361  420
           
Sbjct: 551  379

Query: 421  480
           
Sbjct: 611  379

Query: 481  538
           
Sbjct: 671  379

[Close]
BLAST of WMU79381 vs. NCBI nr
Match: gi|747061410|ref|XP_011077173.1| (PREDICTED: uncharacterized protein LOC105161246 [Sesamum indicum])

HSP 1 Score: 159.5 bits (402), Expect = 6.1e-36
Identity = 85/190 (44.74%), Postives = 119/190 (62.63%), Query Frame = 1 

Query: 1   AELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEE 60
           AELIS  G ++A SS PCML+FRS P+R  RT L   PL+LGI TE+Q ++FPILKHKE 
Sbjct: 189 AELISGGGELVAKSSHPCMLQFRSWPIRLTRTFLMGVPLILGISTETQTITFPILKHKEV 248

Query: 61  NQERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXX 120
           +  R+  ++VT+ PR GTS+LP+ Y+A +L+ S+LP  KEL+ RW+WT ++WT+      
Sbjct: 249 SYPRTELVRVTLIPRAGTSSLPQFYDAELLVKSRLPWMKELVYRWKWTFYVWTTIYIFII 308

Query: 121 XXXXXXXXWKPVVFGGM----------SLAELSGMDKGGPTSKEAEESEITVELLRKWQE 180
                    KP++F  M          S  EL+  +   P+ +  EE E+ +E LR+WQ 
Sbjct: 309 LVMVLVFFLKPIIFPVMAAPAVKVEQDSAVELAPQE---PSVRAREEREV-LESLRRWQR 368

Query: 181 MRRKRKAAML 240
            R KRKAA+L
Sbjct: 369 SRNKRKAALL 374

Query: 241  300
           
Sbjct: 429  374

Query: 301  360
           
Sbjct: 489  374

Query: 361  420
           
Sbjct: 549  374

Query: 421  480
           
Sbjct: 609  374

Query: 481  540
           
Sbjct: 669  374

[Close]
BLAST of WMU79381 vs. NCBI nr
Match: gi|848867921|ref|XP_012834606.1| (PREDICTED: uncharacterized protein LOC105955431 [Erythranthe guttata])

HSP 1 Score: 156.4 bits (394), Expect = 5.2e-35
Identity = 86/192 (44.79%), Postives = 120/192 (62.50%), Query Frame = 1 

Query: 1   AELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEE 60
           AEL+S  G ++A SS PCMLRFRS PVR  RT L   PLLLG+ TE+Q+L+FPILKHKE 
Sbjct: 183 AELLSVGGELVAKSSHPCMLRFRSWPVRLTRTFLMGVPLLLGMTTETQRLTFPILKHKET 242

Query: 61  NQERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXX 120
           +  R+A +++T+ PR GTS+LP+ Y+A +LI S+ P TKEL+ +W+WT  +WT+      
Sbjct: 243 SYPRTADVRITLIPRAGTSSLPQFYDAQVLIRSRPPWTKELVYKWKWTFSVWTTMQIFIF 302

Query: 121 XXXXXXXXWKPVVFGGMS-----LAELSGMDKGGPTSKEA-----EESEITVELLRKWQE 180
                    KP++F  M+     L +         + +EA     +E E++ E LR+WQ 
Sbjct: 303 LVITLVFFLKPLIFPVMAFPFGKLEQDDSYSSAVDSDQEALGTRRDEREVS-ESLRRWQR 362

Query: 181 MRRKRKAAMLWR 240
            R KRKAA+L R
Sbjct: 363 SRSKRKAALLHR 373

Query: 241  300
           
Sbjct: 423  373

Query: 301  360
           
Sbjct: 483  373

Query: 361  420
           
Sbjct: 543  373

Query: 421  480
           
Sbjct: 603  373

Query: 481  540
           
Sbjct: 663  373

Query: 541  547
           
Sbjct: 723  373

[Close]
BLAST of WMU79381 vs. NCBI nr
Match: gi|502105572|ref|XP_004492838.1| (PREDICTED: uncharacterized protein LOC101508835 [Cicer arietinum])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 84/189 (44.44%), Postives = 124/189 (65.61%), Query Frame = 1 

Query: 1   AELISTSGNIIASSSQPCMLRFRSTPVRFARTVLTSFPLLLGIWTESQKLSFPILKHKEE 60
           AEL+S +GN+IA SSQPCMLRFRS+P+R ARTV+   PL+LGI  E+QKL+  +L+HKEE
Sbjct: 188 AELVSVNGNVIAKSSQPCMLRFRSSPIRLARTVMMGLPLVLGISAETQKLNVKLLRHKEE 247

Query: 61  NQERSAFIQVTISPRIGTSALPELYEAHILINSKLPKTKELLGRWRWTCFLWTSXXXXXX 120
           NQ  +A I+VT+ PR G+S+LP+LYEA I++NS LP  KEL+  W+WT ++W S      
Sbjct: 248 NQRTNA-IRVTLHPRSGSSSLPQLYEAEIVLNSHLPWAKELIRNWKWTFYVWVSLYVYIL 307

Query: 121 XXXXXXXXWKPVV-------FGGMSLAELSGMDKGGPTSKEA---EESEITVELLRKWQE 180
                   ++P++       F    ++E++  +      +E    +ESE++ ELLRKW+ 
Sbjct: 308 LLMLLLCCYRPLIFLVTPESFFDQRVSEVTSEEPKELQVRELLGDDESEVS-ELLRKWRL 367

Query: 181 MRRKRKAAM 240
            + KRK+ +
Sbjct: 368 SKSKRKSIL 374

Query: 241  300
           
Sbjct: 428  374

Query: 301  360
           
Sbjct: 488  374

Query: 361  420
           
Sbjct: 548  374

Query: 421  480
           
Sbjct: 608  374

Query: 481  538
           
Sbjct: 668  374

The following BLAST results are available for this feature:
BLAST of WMU79381 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G16460.15.0e-2840.57 Putative adipose-regulatory protein (Seipin)[more]
AT2G34380.11.3e-1534.48 Putative adipose-regulatory protein (Seipin)[more]
AT1G29760.13.2e-1437.07 Putative adipose-regulatory protein (Seipin)[more]
BLAST of WMU79381 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SEI1_ARATH8.9e-2740.57Seipin-1 OS=Arabidopsis thaliana GN=SEI1 PE=2 SV=1[more]
SEI3_ARATH2.3e-1434.48Seipin-3 OS=Arabidopsis thaliana GN=SEI3 PE=2 SV=1[more]
SEI2_ARATH5.6e-1337.07Seipin-2 OS=Arabidopsis thaliana GN=SEI2 PE=2 SV=1[more]
BLAST of WMU79381 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085951|ref|XP_008443693.1|7.7e-6371.12PREDICTED: uncharacterized protein LOC103487228 [Cucumis melo][more]
gi|449442797|ref|XP_004139167.1|1.3e-5765.61PREDICTED: uncharacterized protein LOC101206366 [Cucumis sativus][more]
gi|747061410|ref|XP_011077173.1|6.1e-3644.74PREDICTED: uncharacterized protein LOC105161246 [Sesamum indicum][more]
gi|848867921|ref|XP_012834606.1|5.2e-3544.79PREDICTED: uncharacterized protein LOC105955431 [Erythranthe guttata][more]
gi|502105572|ref|XP_004492838.1|1.2e-3444.44PREDICTED: uncharacterized protein LOC101508835 [Cicer arietinum][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla009553Cla009553gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
WMN42B02WMN42B02EST