WMU78667 (transcribed_cluster) Watermelon (97103) v1

NameWMU78667
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr7 : 29338894 .. 29341603 (-)
Sequence length376
The following sequences are available for this feature:

transcribed_cluster sequence

AAAAAAAAAAAAAAAGGCAAAATTTGAGGTAAAATTCATATATTTCCAACTCCCAATAATTCCAGATGTTATAAGCATTCTTTGCTTCCACAGGGGCAATTCTCAACTTCTTTGTTAAGCTTCTGAATTTGATTTTGAAAACCTTTGATATGCTGCACTGCCAAGTCCAACATGTCTGAATAGCTTGGTTGCTTATCCATGTTGGGAACAAGCTCTTGAAGTTTCTTCAATTTTCCACTGATTCTAGTTCTTCTCTCCCGTTCGGCAATACTCCGAGGGTGAGTAGCACAGCCACGCTTGGCTCGAATCTTACAAGGAACAGCATCTTCAGGAATTTGAAGCAACCTCTCCACAGCTGCCATTTCTAGAGTTGTTT
BLAST of WMU78667 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 5.2e-39
Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = -3

Query: 78  MAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPS 137
           M  ++  +Q+PED+VPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQ+LVPNMDKQ S
Sbjct: 265 MNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324

Query: 138 YSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKE 197
           YSDMLDLAVQHIKG Q+Q+Q L K+ ENC CG  E
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 359

Query: 198 257
           
Sbjct: 385 359

Query: 258 317
           
Sbjct: 445 359

Query: 318 363
           
Sbjct: 505 359

BLAST of WMU78667 vs. TAIR10
Match: AT2G43140.2 (AT2G43140.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = -3

Query: 84  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 143
           TTLEMA +E L+ IPED+VPC+ RAKRG ATHPRSIAERERRTRISGKLKKLQELVPNMD
Sbjct: 209 TTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMD 268

Query: 144 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGS 203
           KQ SY+DMLDLAV+HIKG Q+Q++ L K +E C CG+
Sbjct: 269 KQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTCGA 305

Query: 204 263
           
Sbjct: 329 305

Query: 264 323
           
Sbjct: 389 305

Query: 324 375
           
Sbjct: 449 305

BLAST of WMU78667 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 5.8e-30
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = -3

Query: 78  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 137
           T  +M +V++ LQ+ +D+VPCKIRAKRGCATHPRSIAER RRTRIS +++KLQELVPNMD
Sbjct: 258 TASDMVSVDKYLQL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 317

Query: 138 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKE 197
           KQ + SDMLDLAV +IK  Q Q + LN    NC C +KE
Sbjct: 318 KQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

Query: 198 257
           
Sbjct: 378 355

Query: 258 317
           
Sbjct: 438 355

Query: 318 375
           
Sbjct: 498 355

BLAST of WMU78667 vs. TAIR10
Match: AT1G35460.1 (AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 54/87 (62.07%), Postives = 71/87 (81.61%), Query Frame = -3

Query: 78  QIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPSYSDMLDLA 137
           +I ED+VPC++RAKRGCATHPRSIAER RRTRIS ++++LQELVPNMDKQ + +DML+ A
Sbjct: 171 KIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEA 230

Query: 138 VQHIKGFQNQIQKLNKEVENCPCGSKE 197
           V+++K  Q+QIQ+L ++ + C C  KE
Sbjct: 231 VEYVKALQSQIQELTEQQKRCKCKPKE 257

Query: 198 257
           
Sbjct: 291 257

Query: 258 317
           
Sbjct: 351 257

Query: 318 339
           
Sbjct: 411 257

BLAST of WMU78667 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.6e-26
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -3

Query: 84  QIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPSYSDMLDLA 143
           Q+  D++PCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNMD Q + +DMLDLA
Sbjct: 294 QLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLA 353

Query: 144 VQHIKGFQNQIQKLNKEVENCPCGS 203
           VQ+IK  Q Q++ L +    C C S
Sbjct: 354 VQYIKDLQEQVKALEESRARCRCSS 378

Query: 204 263
           
Sbjct: 414 378

Query: 264 323
           
Sbjct: 474 378

Query: 324 339
           
Sbjct: 534 378

BLAST of WMU78667 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.3e-38
Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = -3

Query: 78  MAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPS 137
           M  ++  +Q+PED+VPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQ+LVPNMDKQ S
Sbjct: 265 MNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324

Query: 138 YSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKE 197
           YSDMLDLAVQHIKG Q+Q+Q L K+ ENC CG  E
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 359

Query: 198 257
           
Sbjct: 385 359

Query: 258 317
           
Sbjct: 445 359

Query: 318 363
           
Sbjct: 505 359

BLAST of WMU78667 vs. Swiss-Prot
Match: BH129_ARATH (Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 4.0e-33
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = -3

Query: 123 TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 182
           TTLEMA +E L+ IPED+VPC+ RAKRG ATHPRSIAERERRTRISGKLKKLQELVPNMD
Sbjct: 211 TTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMD 270

Query: 183 KQPSYSDMLDLAVQHIKGFQNQIQ 242
           KQ SY+DMLDLAV+HIKG Q+Q++
Sbjct: 271 KQTSYADMLDLAVEHIKGLQHQVE 294

Query: 243 302
           
Sbjct: 331 294

Query: 303 362
           
Sbjct: 391 294

Query: 363 375
           
Sbjct: 451 294

BLAST of WMU78667 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-28
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = -3

Query: 78  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 137
           T  +M +V++ LQ+ +D+VPCKIRAKRGCATHPRSIAER RRTRIS +++KLQELVPNMD
Sbjct: 258 TASDMVSVDKYLQL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 317

Query: 138 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKE 197
           KQ + SDMLDLAV +IK  Q Q + LN    NC C +KE
Sbjct: 318 KQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

Query: 198 257
           
Sbjct: 378 355

Query: 258 317
           
Sbjct: 438 355

Query: 318 375
           
Sbjct: 498 355

BLAST of WMU78667 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-26
Identity = 54/87 (62.07%), Postives = 71/87 (81.61%), Query Frame = -3

Query: 78  QIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPSYSDMLDLA 137
           +I ED+VPC++RAKRGCATHPRSIAER RRTRIS ++++LQELVPNMDKQ + +DML+ A
Sbjct: 171 KIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEA 230

Query: 138 VQHIKGFQNQIQKLNKEVENCPCGSKE 197
           V+++K  Q+QIQ+L ++ + C C  KE
Sbjct: 231 VEYVKALQSQIQELTEQQKRCKCKPKE 257

Query: 198 257
           
Sbjct: 291 257

Query: 258 317
           
Sbjct: 351 257

Query: 318 339
           
Sbjct: 411 257

BLAST of WMU78667 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -3

Query: 84  QIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQPSYSDMLDLA 143
           Q+  D++PCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNMD Q + +DMLDLA
Sbjct: 294 QLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLA 353

Query: 144 VQHIKGFQNQIQKLNKEVENCPCGS 203
           VQ+IK  Q Q++ L +    C C S
Sbjct: 354 VQYIKDLQEQVKALEESRARCRCSS 378

Query: 204 263
           
Sbjct: 414 378

Query: 264 323
           
Sbjct: 474 378

Query: 324 339
           
Sbjct: 534 378

BLAST of WMU78667 vs. NCBI nr
Match: gi|449468734|ref|XP_004152076.1| (PREDICTED: transcription factor bHLH128 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 6.4e-47
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = -3

Query: 72  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 131
           TTLEMAAVERLLQIPED+VPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD
Sbjct: 270 TTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 329

Query: 132 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKECL 191
           KQ SYSDMLDLAVQHIKG QNQIQKLNKEVENC CGSKECL
Sbjct: 330 KQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKECL 370

Query: 192 251
           
Sbjct: 390 370

Query: 252 311
           
Sbjct: 450 370

Query: 312 371
           
Sbjct: 510 370

Query: 372 375
           
Sbjct: 570 370

BLAST of WMU78667 vs. NCBI nr
Match: gi|659108965|ref|XP_008454477.1| (PREDICTED: transcription factor bHLH128 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = -3

Query: 75  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 134
           TTLEMAAVERLLQIPED+VPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD
Sbjct: 241 TTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 300

Query: 135 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKEC 194
           KQ SYSDMLDLAVQHIKG QNQIQKLNKEVENC CGSKEC
Sbjct: 301 KQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKEC 340

Query: 195 254
           
Sbjct: 361 340

Query: 255 314
           
Sbjct: 421 340

Query: 315 374
           
Sbjct: 481 340

BLAST of WMU78667 vs. NCBI nr
Match: gi|297745167|emb|CBI39159.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 85/101 (84.16%), Postives = 96/101 (95.05%), Query Frame = -3

Query: 72  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 131
           T+LEMAAVE+LLQ+PED+VPCK+RAKRGCATHPRSIAERERRTRISGKLKKLQ+LVPNMD
Sbjct: 310 TSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMD 369

Query: 132 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKECL 191
           KQ SY+DMLDLAVQHIKG QN++QKLNKE+ENC CG K+ L
Sbjct: 370 KQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQAL 410

Query: 192 251
           
Sbjct: 430 410

Query: 252 311
           
Sbjct: 490 410

Query: 312 371
           
Sbjct: 550 410

Query: 372 375
           
Sbjct: 610 410

BLAST of WMU78667 vs. NCBI nr
Match: gi|731390719|ref|XP_010650469.1| (PREDICTED: transcription factor bHLH128 isoform X2 [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 85/101 (84.16%), Postives = 96/101 (95.05%), Query Frame = -3

Query: 72  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 131
           T+LEMAAVE+LLQ+PED+VPCK+RAKRGCATHPRSIAERERRTRISGKLKKLQ+LVPNMD
Sbjct: 253 TSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMD 312

Query: 132 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKECL 191
           KQ SY+DMLDLAVQHIKG QN++QKLNKE+ENC CG K+ L
Sbjct: 313 KQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQAL 353

Query: 192 251
           
Sbjct: 373 353

Query: 252 311
           
Sbjct: 433 353

Query: 312 371
           
Sbjct: 493 353

Query: 372 375
           
Sbjct: 553 353

BLAST of WMU78667 vs. NCBI nr
Match: gi|1009139434|ref|XP_015887122.1| (PREDICTED: transcription factor bHLH128 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 86/99 (86.87%), Postives = 93/99 (93.94%), Query Frame = -3

Query: 78  TTLEMAAVERLLQIPEDAVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 137
           TTLEMA VE+LLQIPED+VPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD
Sbjct: 262 TTLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMD 321

Query: 138 KQPSYSDMLDLAVQHIKGFQNQIQKLNKEVENCPCGSKE 197
           KQ SY+DMLDLAVQHIKG QNQ+Q L+KE+ENC CG K+
Sbjct: 322 KQTSYADMLDLAVQHIKGLQNQVQNLHKELENCSCGCKQ 360

Query: 198 257
           
Sbjct: 382 360

Query: 258 317
           
Sbjct: 442 360

Query: 318 375
           
Sbjct: 502 360

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G05805.15.2e-3977.89 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G43140.21.2e-3876.29 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G42280.15.8e-3064.65 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G35460.12.7e-2762.07 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G51140.16.6e-2662.35 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
BH128_ARATH9.3e-3877.89Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1[more]
BH129_ARATH4.0e-3380.95Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129 PE=2 SV=2[more]
BH130_ARATH1.0e-2864.65Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1[more]
BH080_ARATH4.8e-2662.07Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1[more]
BH122_ARATH1.2e-2462.35Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
gi|449468734|ref|XP_004152076.1|6.4e-4796.04PREDICTED: transcription factor bHLH128 [Cucumis sativus][more]
gi|659108965|ref|XP_008454477.1|2.4e-4696.00PREDICTED: transcription factor bHLH128 [Cucumis melo][more]
gi|297745167|emb|CBI39159.3|2.1e-4284.16unnamed protein product [Vitis vinifera][more]
gi|731390719|ref|XP_010650469.1|2.1e-4284.16PREDICTED: transcription factor bHLH128 isoform X2 [Vitis vinifera][more]
gi|1009139434|ref|XP_015887122.1|1.1e-4186.87PREDICTED: transcription factor bHLH128 isoform X2 [Ziziphus jujuba][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010738Cla010738gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
SSH0002285SSH0002285EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 30..88
score: 5.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 31..75
score: 2.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 31..81
score: 1.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 25..75
score: 12
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 28..90
score: 2.75
NoneNo IPR availableunknownCoilCoilcoord: 65..85
scor
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 1..95
score: 2.3
NoneNo IPR availablePANTHERPTHR16223:SF10TRANSCRIPTION FACTOR BHLH128-RELATEDcoord: 1..95
score: 2.3