WMU78538 (transcribed_cluster) Watermelon (97103) v1

NameWMU78538
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGlutathione S-transferase
LocationChr5 : 3379360 .. 3379887 (+)
Sequence length378
The following sequences are available for this feature:

transcribed_cluster sequence

GTGGTTGAAGAGTTGGTGGATGTGAAAATCCTTGAACCAAATACGGTCCCTCGCCTCTATGCTTGGGCGGAGAACTTCCGGCAAGCCGCCGTGATCAGAGACAATCTGCCGGATCACGACGACATGGTGCCGCGGCTCAAGTTCCGGAGGGAGCAGTTATTGGCAATTGCGAAGAAATCATAAGTGCGATTCCGGATTTGATTTGGGAATTTAGGGCTTTTTTTTTTATTATTATTTTTTTTTTAATTTTAATTATTATTTTGTTTTTCGGTTTTTGGGTGAAACAGTTTGGGTGTTTTGTTGATCCACACCGGTTGTATTTGTATTTTGGTCAGGCATGCATTTTAGTTGTGAGTTTCTACTTTTGTTTGAGTTTGT
BLAST of WMU78538 vs. NCBI nr
Match: gi|659075964|ref|XP_008438426.1| (PREDICTED: probable glutathione S-transferase isoform X1 [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-21
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 1

Query: 1   VVEELVDVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDDMVPRLKFRREQLLAIAKKS 60
           VVEE+V+VKILEPNTVPRLYAWAENFRQAAVIRDNLPDHD+MV RLKFRREQ L I +KS
Sbjct: 166 VVEEVVEVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDEMVSRLKFRREQRLQIGRKS 225

Query: 61  120
           
Sbjct: 226 225

Query: 121 180
           
Sbjct: 286 225

BLAST of WMU78538 vs. NCBI nr
Match: gi|778678021|ref|XP_011650902.1| (PREDICTED: probable glutathione S-transferase [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-21
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 1

Query: 1   VVEELVDVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDDMVPRLKFRREQLLAIAKKS 60
           V+EELVDVK+LEPNT PRLY WAENFRQAAVIRDNLPDHD+MVPRL+ RREQLL +AKKS
Sbjct: 165 VMEELVDVKVLEPNTNPRLYVWAENFRQAAVIRDNLPDHDEMVPRLRSRREQLLEMAKKS 224

Query: 61  120
           
Sbjct: 225 224

Query: 121 180
           
Sbjct: 285 224

BLAST of WMU78538 vs. NCBI nr
Match: gi|659075968|ref|XP_008438428.1| (PREDICTED: probable glutathione S-transferase isoform X3 [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-21
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 1

Query: 1   VVEELVDVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDDMVPRLKFRREQLLAIAKKS 60
           V+EELVDVK+LEPNT+PRLY WAENFRQAAVIR+NLPDHD+MVPRL+ RREQ+L +AKKS
Sbjct: 165 VMEELVDVKVLEPNTIPRLYVWAENFRQAAVIRNNLPDHDEMVPRLRSRREQVLKMAKKS 224

Query: 61  120
           
Sbjct: 225 224

Query: 121 180
           
Sbjct: 285 224

BLAST of WMU78538 vs. NCBI nr
Match: gi|659075966|ref|XP_008438427.1| (PREDICTED: probable glutathione S-transferase isoform X2 [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-21
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 1

Query: 1   VVEELVDVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDDMVPRLKFRREQLLAIAKKS 60
           V+EELVDVK+LEPNT+PRLY WAENFRQAAVIR+NLPDHD+MVPRL+ RREQ+L +AKKS
Sbjct: 165 VMEELVDVKVLEPNTIPRLYVWAENFRQAAVIRNNLPDHDEMVPRLRSRREQVLKMAKKS 224

Query: 61  120
           
Sbjct: 225 224

Query: 121 180
           
Sbjct: 285 224

BLAST of WMU78538 vs. NCBI nr
Match: gi|694378512|ref|XP_009365488.1| (PREDICTED: probable glutathione S-transferase [Pyrus x bretschneideri])

HSP 1 Score: 73.6 bits (179), Expect = 2.9e-10
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1

Query: 4   VEELVDVKILEPNTVPRLYAWAENFRQAAVIRDNLPDHDDMVPRLKFRREQLLA 63
           VEE+V VK+LEP+T+PRL+AW +NF+Q  VIRDNLPD+  +V  +K  RE L+A
Sbjct: 166 VEEMVGVKLLEPSTLPRLHAWVQNFKQVPVIRDNLPDYQKLVAHMKRIREMLVA 219

Query: 64  123
           
Sbjct: 226 219

Query: 124 166
           
Sbjct: 286 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659075964|ref|XP_008438426.1|2.7e-2186.67PREDICTED: probable glutathione S-transferase isoform X1 [Cucumis melo][more]
gi|778678021|ref|XP_011650902.1|3.6e-2185.00PREDICTED: probable glutathione S-transferase [Cucumis sativus][more]
gi|659075968|ref|XP_008438428.1|6.1e-2181.67PREDICTED: probable glutathione S-transferase isoform X3 [Cucumis melo][more]
gi|659075966|ref|XP_008438427.1|6.1e-2181.67PREDICTED: probable glutathione S-transferase isoform X2 [Cucumis melo][more]
gi|694378512|ref|XP_009365488.1|2.9e-1059.26PREDICTED: probable glutathione S-transferase [Pyrus x bretschneideri][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR010987Glutathione-S-Trfase_C-like

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021463Cla021463gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
SSH0001041SSH0001041EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010987Glutathione S-transferase, C-terminal-likeGENE3DG3DSA:1.20.1050.10coord: 1..53
score: 5.
IPR010987Glutathione S-transferase, C-terminal-likeunknownSSF47616GST C-terminal domain-likecoord: 2..51
score: 1.0
NoneNo IPR availablePANTHERPTHR11260GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAININGcoord: 1..56
score: 1.5
NoneNo IPR availablePANTHERPTHR11260:SF227SUBFAMILY NOT NAMEDcoord: 1..56
score: 1.5