WMU76617 (transcribed_cluster) Watermelon (97103) v1

NameWMU76617
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr8 : 15504048 .. 15504775 (-)
Sequence length407
The following sequences are available for this feature:

transcribed_cluster sequence

AGTGAAACTAGGGCACTTGTTACCAGAAGTAAAAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTCGGCCAGGTTTCGGCTAAAAAGAAGAGTAATCTTAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCGCCGAAGCCACCACCGGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTGGCTGGCGGCGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGCCCAATGAGAAGTAAAGATCGAGAGTAAAACAGCTTCATCGGAGTATTCAAATGAAATGAATCTTTAA
BLAST of WMU76617 vs. NCBI nr
Match: gi|659081933|ref|XP_008441584.1| (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 70/116 (60.34%), Postives = 76/116 (65.52%), Query Frame = 2

Query: 17  LLPEVKSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRK 76
           L+   +SVD+GGFYLKMFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRK
Sbjct: 156 LVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRK 215

Query: 77  RSSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWFCISPMRSKDRE 136
           RSSV+                                     CWFCISPMRSKDRE
Sbjct: 216 RSSVSGGENDGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKDRE 271

Query: 137 196
           
Sbjct: 276 271

Query: 197 256
           
Sbjct: 336 271

Query: 257 316
           
Sbjct: 396 271

Query: 317 365
           
Sbjct: 456 271

BLAST of WMU76617 vs. NCBI nr
Match: gi|449453013|ref|XP_004144253.1| (PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 70/116 (60.34%), Postives = 76/116 (65.52%), Query Frame = 2

Query: 17  LLPEVKSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRK 76
           L+   +SVD+GGFYLKMFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRK
Sbjct: 152 LVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRK 211

Query: 77  RSSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWFCISPMRSKDRE 136
           RSSV+                                     CWFCISPMRSKDRE
Sbjct: 212 RSSVSGGENDGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKDRE 267

Query: 137 196
           
Sbjct: 272 267

Query: 197 256
           
Sbjct: 332 267

Query: 257 316
           
Sbjct: 392 267

Query: 317 365
           
Sbjct: 452 267

BLAST of WMU76617 vs. NCBI nr
Match: gi|700192533|gb|KGN47737.1| (hypothetical protein Csa_6G397170 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2

Query: 35  SVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPP-VDRDWWRKRSSVA 94
           S++N G YLKM FP   G  + KKK   + DS L+ S++VSPKPP  V++DWW++R SV+
Sbjct: 165 SMENEGLYLKMGFPKSIGTTTRKKKK--KNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVS 222

Query: 95  154
           
Sbjct: 225 222

Query: 155 212
           
Sbjct: 285 222

BLAST of WMU76617 vs. NCBI nr
Match: gi|659133347|ref|XP_008466690.1| (PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2

Query: 35  SVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPP-VDRDWWRKRSSVA 94
           S++N G YLKM FP   G  + KKK   + DS L+ S++VSPKPP  V++DWW++R SV+
Sbjct: 167 SMENEGLYLKMGFPKSIGTTTRKKKK--KNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVS 224

Query: 95  154
           
Sbjct: 227 224

Query: 155 212
           
Sbjct: 287 224

BLAST of WMU76617 vs. NCBI nr
Match: gi|449458095|ref|XP_004146783.1| (PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2

Query: 35  SVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPP-VDRDWWRKRSSVA 94
           S++N G YLKM FP   G  + KKK   + DS L+ S++VSPKPP  V++DWW++R SV+
Sbjct: 165 SMENEGLYLKMGFPKSIGTTTRKKKK--KNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVS 222

Query: 95  154
           
Sbjct: 225 222

Query: 155 212
           
Sbjct: 285 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659081933|ref|XP_008441584.1|1.2e-3060.34PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo][more]
gi|449453013|ref|XP_004144253.1|1.2e-3060.34PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus][more]
gi|700192533|gb|KGN47737.1|2.7e-0650.00hypothetical protein Csa_6G397170 [Cucumis sativus][more]
gi|659133347|ref|XP_008466690.1|2.7e-0650.00PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo][more]
gi|449458095|ref|XP_004146783.1|2.7e-0650.00PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013881Cla013881gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S4_0102726S4_0102726EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34193FAMILY NOT NAMEDcoord: 13..122
score: 1.2
NoneNo IPR availablePANTHERPTHR34193:SF1SUBFAMILY NOT NAMEDcoord: 13..122
score: 1.2