WMU75514 (transcribed_cluster) Watermelon (97103) v1

NameWMU75514
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 9575041 .. 9575957 (+)
Sequence length199
The following sequences are available for this feature:

transcribed_cluster sequence

GGCCTCTCGCTGAGCGTCCGGAACAATGTCAAAGGATCGTTGTCACAGAGGGCTCGGGAGAGATCAATTCGTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTGAAACTACAAAGAGGAAGAGGTTAAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAAAAGACAAGGAGAAAGGGAAGGGAAAGAA
BLAST of WMU75514 vs. NCBI nr
Match: gi|659112008|ref|XP_008456021.1| (PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 7.4e-10
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 1

Query: 4   LSLSVRNNVKGSLSQRARERSIRYGSVICMAKRYAPETTKRKRLS 63
           L+LS   NVKG L QRA ERSIRYGSVICMAKRYAP+TTKRKRLS
Sbjct: 48  LTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLS 92

Query: 64  123
           
Sbjct: 108 92

Query: 124 139
           
Sbjct: 168 92

BLAST of WMU75514 vs. NCBI nr
Match: gi|778680352|ref|XP_011651295.1| (PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-09
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 1

Query: 4   LSLSVRNNVKGSLSQRARERSIRYGSVICMAKRYAPETTKRKRLS 63
           L+L+   N+KG LSQRA ERSIRY SVICMAKRYAPETTKRKRLS
Sbjct: 48  LTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLS 92

Query: 64  123
           
Sbjct: 108 92

Query: 124 139
           
Sbjct: 168 92

BLAST of WMU75514 vs. NCBI nr
Match: gi|778680349|ref|XP_011651294.1| (PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-07
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 1

Query: 40  LSQRARERSIRYGSVICMAKRYAPETTKRKRLS 99
           LSQRA ERSIRY SVICMAKRYAPETTKRKRLS
Sbjct: 73  LSQRALERSIRYESVICMAKRYAPETTKRKRLS 105

Query: 100 139
           
Sbjct: 133 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659112008|ref|XP_008456021.1|7.4e-1082.22PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo][more]
gi|778680352|ref|XP_011651295.1|2.8e-0980.00PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus][more]
gi|778680349|ref|XP_011651294.1|5.9e-0793.94PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla004291Cla004291gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S4_0042101S4_0042101EST