WMU74885 (transcribed_cluster) Watermelon (97103) v1

NameWMU74885
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAT1G65230-like protein
LocationChr3 : 18020976 .. 18022448 (-)
Sequence length299
The following sequences are available for this feature:

transcribed_cluster sequence

CATTACGGCCGAGTCTCTACCGAGAAACAGAACTTGGAAATGTTCCCTGACCCTTCCGGTGATCCTACCAAGTTCTTTCAAGGTGAGGACAACTTCCAAAGAGATGCATACCAATTTGCGTTGCTGCTGGCTATCCTCTATTTTGTTGTACAGTTTTTGAGGGCCACACTGTGAATGCAACAAAACTAAGGTACGTTCTCTATTCTACACTACTCGAAACCTCATCGTGTATAATTACACTGAAAATTCATATTTTAGTCAAACCCAAACAATAATGTATGTATGTAATTATGGATTTT
BLAST of WMU74885 vs. TAIR10
Match: AT1G65230.1 (AT1G65230.1 Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10
Identity = 28/53 (52.83%), Postives = 41/53 (77.36%), Query Frame = 1

Query: 13  VSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 72
           ++T K++ +++ DP+ DP KFFQ +++F+RD YQ AL LAI+YFVVQFL+ T+
Sbjct: 235 LTTRKEDTDIYRDPT-DPNKFFQRDNSFERDVYQIALFLAIVYFVVQFLKNTI 286

Query: 73  132
           
Sbjct: 295 286

Query: 133 172
           
Sbjct: 355 286

BLAST of WMU74885 vs. NCBI nr
Match: gi|659085861|ref|XP_008443648.1| (PREDICTED: uncharacterized protein LOC103487195 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 7   GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 66
           GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQ+DAYQFALLLAILYFVVQFLRATL
Sbjct: 249 GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQKDAYQFALLLAILYFVVQFLRATL 303

Query: 67  126
           
Sbjct: 309 303

Query: 127 172
           
Sbjct: 369 303

BLAST of WMU74885 vs. NCBI nr
Match: gi|449442645|ref|XP_004139091.1| (PREDICTED: uncharacterized protein LOC101206988 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 7.4e-22
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 7   GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 66
           GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQ+DAYQFALLLAI+YFVVQFLRATL
Sbjct: 251 GRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQKDAYQFALLLAIIYFVVQFLRATL 305

Query: 67  126
           
Sbjct: 311 305

Query: 127 172
           
Sbjct: 371 305

BLAST of WMU74885 vs. NCBI nr
Match: gi|225430926|ref|XP_002277168.1| (PREDICTED: uncharacterized protein LOC100263239 [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1

Query: 10  RVSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 69
           R+STEK+NLE++PDPSGDPTKFFQ +D+FQRD YQ AL LA+LYFVVQFLR TL
Sbjct: 248 RLSTEKENLEIYPDPSGDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 301

Query: 70  129
           
Sbjct: 308 301

Query: 130 172
           
Sbjct: 368 301

BLAST of WMU74885 vs. NCBI nr
Match: gi|661891964|emb|CDP04190.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 1

Query: 10  RVSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 69
           R +TE +N+EM+PDPSGDPTKFFQ +D FQRDAYQFAL LA+LYFVVQFLR TL
Sbjct: 256 RRTTENENVEMYPDPSGDPTKFFQRDDGFQRDAYQFALFLAVLYFVVQFLRTTL 309

Query: 70  129
           
Sbjct: 316 309

Query: 130 172
           
Sbjct: 376 309

BLAST of WMU74885 vs. NCBI nr
Match: gi|297735250|emb|CBI17612.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1

Query: 10  RVSTEKQNLEMFPDPSGDPTKFFQGEDNFQRDAYQFALLLAILYFVVQFLRATL 69
           R+STEK+NLE++PDPSGDPTKFFQ +D+FQRD YQ AL LA+LYFVVQFLR TL
Sbjct: 293 RLSTEKENLEIYPDPSGDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 346

Query: 70  129
           
Sbjct: 353 346

Query: 130 172
           
Sbjct: 413 346

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G65230.11.1e-1052.83 Uncharacterized conserved protein (DUF2358)[more]
Match NameE-valueIdentityDescription
gi|659085861|ref|XP_008443648.1|4.4e-2298.18PREDICTED: uncharacterized protein LOC103487195 [Cucumis melo][more]
gi|449442645|ref|XP_004139091.1|7.4e-2296.36PREDICTED: uncharacterized protein LOC101206988 [Cucumis sativus][more]
gi|225430926|ref|XP_002277168.1|6.1e-1677.78PREDICTED: uncharacterized protein LOC100263239 [Vitis vinifera][more]
gi|661891964|emb|CDP04190.1|6.1e-1677.78unnamed protein product [Coffea canephora][more]
gi|297735250|emb|CBI17612.3|6.1e-1677.78unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla002177Cla002177gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S4_0014903S4_0014903EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36334FAMILY NOT NAMEDcoord: 8..57
score: 5.2