WMU72615 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU72615
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Exocyst subunit exo70 family protein B1
Location	Chr3 : 398655 .. 398994 (+)
Sequence length	347

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGGTCAGTTTTAGGCGAGGATTGGATTCGAAAACACTCGGTTAAAAACCGGCAATACCTTGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGGGCATTGAAAATGGACAGTGGCACTATAGCTCCGGCTGTGATGAAGGAGAAGCTCCAATCATTCAATATGCAATTTGTAAGAAATACTGCCAAACCCCAAACTCCACCATGGGTGGATATTTGTAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGC

Library


Library category	ESTs
watermelon fruit 26d library	1

Homology

[Close]

BLAST of WMU72615 vs. TAIR10
Match: AT5G58430.1 (AT5G58430.1 exocyst subunit exo70 family protein B1)

HSP 1 Score: 110.2 bits (274), Expect = 8.9e-25
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           K+YKD +L  VFLMNNGRYIVQKVKD +LG +LG+DWIRKH+VK +QY  NY +SSW+K+
Sbjct: 457 KVYKDPALCYVFLMNNGRYIVQKVKDGDLGLLLGDDWIRKHNVKVKQYHMNYQRSSWNKM 516

Query: 62  VGALKMDSGTIA----PAVMKEKLQSFNMQF 121
           +G LK+D+           MKEKL+ FN+QF
Sbjct: 517 LGLLKVDNTAAGMNGLGKTMKEKLKQFNIQF 547

Query: 122  181
           
Sbjct: 577  547

Query: 182  241
           
Sbjct: 637  547

Query: 242  263
           
Sbjct: 697  547

[Close]

BLAST of WMU72615 vs. TAIR10
Match: AT1G07000.1 (AT1G07000.1 exocyst subunit exo70 family protein B2)

HSP 1 Score: 87.8 bits (216), Expect = 4.7e-18
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           + Y+D SL  +F+MNN +YI+ K KD+ELG VLGEDWI KH+ K RQY  NY +SSW++V
Sbjct: 441 RTYRDPSLCFLFMMNNDKYILDKAKDNELGLVLGEDWIVKHAAKLRQYHSNYRRSSWNQV 500

Query: 62  VGALKMDSGTIAPAVMKEKLQSFNMQF 121
           VG L+ D G     V  E L+ F  QF
Sbjct: 501 VGLLRTD-GPYPKLV--ENLRLFKSQF 524

Query: 122  181
           
Sbjct: 561  524

Query: 182  241
           
Sbjct: 621  524

Query: 242  263
           
Sbjct: 681  524

[Close]

BLAST of WMU72615 vs. TAIR10
Match: AT5G50380.1 (AT5G50380.1 exocyst subunit exo70 family protein F1)

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-17
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           K+Y+D  L  VF+MNN  YIVQKVKDSELG +LG+DW+RK   + RQY   YL++SWS+V
Sbjct: 499 KLYEDGGLQHVFMMNNIYYIVQKVKDSELGKLLGDDWVRKRRGQIRQYATGYLRASWSRV 558

Query: 62  VGALKMD---------------SGTIAPAVMKEKLQSFNMQF 121
           + AL+ +               S   +   +KE+ + FN  F
Sbjct: 559 LSALRDESMGGSSSGSPSYGQRSNNSSKMALKERFRGFNASF 600

Query: 122  181
           
Sbjct: 619  600

Query: 182  241
           
Sbjct: 679  600

Query: 242  263
           
Sbjct: 739  600

[Close]

BLAST of WMU72615 vs. TAIR10
Match: AT5G13990.1 (AT5G13990.1 exocyst subunit exo70 family protein C2)

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-16
Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDS-ELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSK 61
           K YKD+ LS +F+MNNGRYIVQK+K S E+  V+G+ W R+ S + R Y  NY + +W K
Sbjct: 519 KQYKDIPLSCIFMMNNGRYIVQKIKGSAEIHEVMGDTWCRRRSSELRNYHKNYQRETWGK 578

Query: 62  VVGAL----KMDSGTIAPAVMKEKLQSFNMQF 121
           ++G L     M +G I    +KE+ +SFN  F
Sbjct: 579 LLGFLGHEGLMHNGKIVKPNLKERFKSFNATF 610

Query: 122  181
           
Sbjct: 639  610

Query: 182  241
           
Sbjct: 699  610

Query: 242  263
           
Sbjct: 759  610

[Close]

BLAST of WMU72615 vs. TAIR10
Match: AT5G13150.1 (AT5G13150.1 exocyst subunit exo70 family protein C1)

HSP 1 Score: 78.6 bits (192), Expect = 2.9e-15
Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDS-ELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSK 61
           ++Y+D SL  +FLMNNGRYI+QK+K S E+  ++G+ W RK S + RQY  +Y + +W K
Sbjct: 482 RLYRDPSLRFIFLMNNGRYILQKIKGSIEIRDLMGQSWTRKRSTELRQYHKSYQRETWGK 541

Query: 62  VVGALKMD----SGTIAPAVMKEKLQSFNMQF 121
           V+  +  +    +G ++  V+KE+ + FN  F
Sbjct: 542 VLQCMNQEGLQVNGKVSKPVLKERFKIFNAMF 573

Query: 122  181
           
Sbjct: 602  573

Query: 182  241
           
Sbjct: 662  573

Query: 242  263
           
Sbjct: 722  573

[Close]

BLAST of WMU72615 vs. Swiss-Prot
Match: E70B1_ARATH (Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-23
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           K+YKD +L  VFLMNNGRYIVQKVKD +LG +LG+DWIRKH+VK +QY  NY +SSW+K+
Sbjct: 457 KVYKDPALCYVFLMNNGRYIVQKVKDGDLGLLLGDDWIRKHNVKVKQYHMNYQRSSWNKM 516

Query: 62  VGALKMDSGTIA----PAVMKEKLQSFNMQF 121
           +G LK+D+           MKEKL+ FN+QF
Sbjct: 517 LGLLKVDNTAAGMNGLGKTMKEKLKQFNIQF 547

Query: 122  181
           
Sbjct: 577  547

Query: 182  241
           
Sbjct: 637  547

Query: 242  263
           
Sbjct: 697  547

[Close]

BLAST of WMU72615 vs. Swiss-Prot
Match: E70A1_ARATH (Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.4e-10
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           K YKD +L+ +FLMNN  Y+V+ V+ SE   +LG+DW+++H    +Q+   Y + +W+K+
Sbjct: 459 KQYKDPALTHLFLMNNIHYMVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRVAWTKI 518

Query: 62  V-------------GALK-MDSGTIAPAVMKEKLQSFNMQF 121
           +             G+L+  +S  ++  ++KE+ + FNMQF
Sbjct: 519 LQSSSAQGLTSSGGGSLEGGNSSGVSRGLLKERFKMFNMQF 559

Query: 122  181
           
Sbjct: 579  559

Query: 182  241
           
Sbjct: 639  559

Query: 242  263
           
Sbjct: 699  559

[Close]

BLAST of WMU72615 vs. NCBI nr
Match: gi|449474977|ref|XP_004154337.1| (PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 83/87 (95.40%), Postives = 86/87 (98.85%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLG+DWIRKHSVKNRQYLGNYLKSSWSKV
Sbjct: 469 KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNYLKSSWSKV 528

Query: 62  VGALKMDSGTIAPAVMKEKLQSFNMQF 121
           VGALKMDSGT+AP+ MKEKLQSFNMQF
Sbjct: 529 VGALKMDSGTLAPSAMKEKLQSFNMQF 555

Query: 122  181
           
Sbjct: 589  555

Query: 182  241
           
Sbjct: 649  555

Query: 242  263
           
Sbjct: 709  555

[Close]

BLAST of WMU72615 vs. NCBI nr
Match: gi|659114995|ref|XP_008457332.1| (PREDICTED: exocyst complex component EXO70B1-like [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 83/87 (95.40%), Postives = 86/87 (98.85%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           KIYKDLSLSSVFLMNNGRYIVQKVKDS+LGSVLG+DWIRKHSVKNRQYLGNYLKSSWSKV
Sbjct: 462 KIYKDLSLSSVFLMNNGRYIVQKVKDSDLGSVLGDDWIRKHSVKNRQYLGNYLKSSWSKV 521

Query: 62  VGALKMDSGTIAPAVMKEKLQSFNMQF 121
           VGALKMDSGT+AP VMKEKLQSFNMQF
Sbjct: 522 VGALKMDSGTLAPTVMKEKLQSFNMQF 548

Query: 122  181
           
Sbjct: 582  548

Query: 182  241
           
Sbjct: 642  548

Query: 242  263
           
Sbjct: 702  548

[Close]

BLAST of WMU72615 vs. NCBI nr
Match: gi|470117222|ref|XP_004294760.1| (PREDICTED: exocyst complex component EXO70B1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           KIY+D +L SVF+MNNGRYIVQKVKDSELGS+LG+DWIRKHS K RQY  NY +S+W+KV
Sbjct: 461 KIYRDSALCSVFMMNNGRYIVQKVKDSELGSLLGDDWIRKHSAKVRQYHVNYQRSAWNKV 520

Query: 62  VGALKMDSGTIAPAV----MKEKLQSFNMQF 121
           VG LK+DSG++AP      MKEKL+ FN+ F
Sbjct: 521 VGVLKLDSGSLAPNAAVKSMKEKLKLFNIYF 551

Query: 122  181
           
Sbjct: 581  551

Query: 182  241
           
Sbjct: 641  551

Query: 242  263
           
Sbjct: 701  551

[Close]

BLAST of WMU72615 vs. NCBI nr
Match: gi|720085329|ref|XP_010243483.1| (PREDICTED: exocyst complex component EXO70B1 [Nelumbo nucifera])

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25
Identity = 58/91 (63.74%), Postives = 76/91 (83.52%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           ++Y+D +LS++FLMNN RYIVQKVKDSELGS+LGEDWIRKHS K RQY  NY ++SW KV
Sbjct: 471 RVYRDSALSAIFLMNNTRYIVQKVKDSELGSLLGEDWIRKHSAKVRQYHVNYQRNSWGKV 530

Query: 62  VGALKMDSGTIAPA----VMKEKLQSFNMQF 121
           +  LK+D+ ++AP+    ++KEKL+SFNMQF
Sbjct: 531 IAVLKLDNSSLAPSAASKLLKEKLKSFNMQF 561

Query: 122  181
           
Sbjct: 591  561

Query: 182  241
           
Sbjct: 651  561

Query: 242  263
           
Sbjct: 711  561

[Close]

BLAST of WMU72615 vs. NCBI nr
Match: gi|729434815|ref|XP_010520187.1| (PREDICTED: exocyst complex component EXO70B1 [Tarenaya hassleriana])

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-25
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 2


Query: 2   KIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKV 61
           K+YKD +L SVFLMNNGRY+VQKVKDS+LG +LGEDWIRKH+ K RQY  NY +SSW+KV
Sbjct: 461 KVYKDPALCSVFLMNNGRYMVQKVKDSDLGLLLGEDWIRKHNAKVRQYHSNYQRSSWNKV 520

Query: 62  VGALKMDSGTIAPAVMKEKLQSFNMQ 121
           VG LK+D+       MKEKL+ FN+Q
Sbjct: 521 VGVLKLDNSNTTAGAMKEKLKQFNVQ 546

Query: 122  181
           
Sbjct: 581  546

Query: 182  241
           
Sbjct: 641  546

Query: 242  260
           
Sbjct: 701  546

The following BLAST results are available for this feature:

BLAST of WMU72615 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58430.1	8.9e-25	59.34	exocyst subunit exo70 family protein B1	[more]
AT1G07000.1	4.7e-18	52.87	exocyst subunit exo70 family protein B2	[more]
AT5G50380.1	3.0e-17	43.14	exocyst subunit exo70 family protein F1	[more]
AT5G13990.1	3.4e-16	45.65	exocyst subunit exo70 family protein C2	[more]
AT5G13150.1	2.9e-15	40.22	exocyst subunit exo70 family protein C1	[more]

BLAST of WMU72615 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E70B1_ARATH	1.6e-23	59.34	Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1	[more]
E70A1_ARATH	4.4e-10	33.66	Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1	[more]

BLAST of WMU72615 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449474977\|ref\|XP_004154337.1\|	1.2e-39	95.40	PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus]	[more]
gi\|659114995\|ref\|XP_008457332.1\|	1.2e-39	95.40	PREDICTED: exocyst complex component EXO70B1-like [Cucumis melo]	[more]
gi\|470117222\|ref\|XP_004294760.1\|	2.6e-26	68.13	PREDICTED: exocyst complex component EXO70B1-like [Fragaria vesca subsp. vesca]	[more]
gi\|720085329\|ref\|XP_010243483.1\|	1.3e-25	63.74	PREDICTED: exocyst complex component EXO70B1 [Nelumbo nucifera]	[more]
gi\|729434815\|ref\|XP_010520187.1\|	3.7e-25	66.28	PREDICTED: exocyst complex component EXO70B1 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR004140	Exo70
IPR016159	Cullin_repeat-like_dom_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0000145	exocyst

Vocabulary: **Biological Process**
Term	Definition
GO:0006887	exocytosis

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
cellular_component	GO:0000145	exocyst

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla008136	Cla008136	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S3_0132124	S3_0132124	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004140	Exocyst complex protein Exo70	PANTHER	PTHR12542	EXOCYST COMPLEX PROTEIN EXO70	coord: 2..88 score: 9.9
IPR004140	Exocyst complex protein Exo70	PFAM	PF03081	Exo70	coord: 2..89 score: 2.4
IPR016159	Cullin repeat-like-containing domain	unknown	SSF74788	Cullin repeat-like	coord: 2..88 score: 1.36
None	No IPR available	PANTHER	PTHR12542:SF29	SUBFAMILY NOT NAMED	coord: 2..88 score: 9.9