WMU72531 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU72531
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr8 : 26094318 .. 26094779 (+)
Sequence length	461

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATTGCCTCTGAACTTCCAGTGAAGGTGCTTGATCTTGATTGCTGGTTGGCCGTCGATCCTCATCTCTAGTTCTGGATCGAATGAATCAGAGAAACTGGGATTTGTATTGACGTTGATGAACTCAATTGAGATAGTGTGGAGCTTGCCTTTCTCATGGAATTGAATTCTGGTGGAGAACATTTTCTTTCCAAATACATGTTCCTTCTTTGAAACAAGAGTCGGCTCAATCAAAGCTGGCCGACAACCTGTCTTTCTGAAGGCATCTTTCTTGAGATCCCCAATAAGCAAAACAACTTCCTCTCCACAGACAACGGCCACATAGTAATCTGACTGTGGCTCTGTCTCTCCATTGAAATTTTGCACTCTTGAGGTCCCAAACCACATCCACAGCTCGACCTTCTACTTCAAAATGCTTAGAACCTTGTTTCTCCAGAAGTACCATGGCTTCATCTCAACCTTAC

Library


Library category	ESTs
watermelon fruit 26d library	1

Homology

[Close]

BLAST of WMU72531 vs. TAIR10
Match: AT4G12690.1 (AT4G12690.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 131.0 bits (328), Expect = 6.4e-31
Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = -3


Query: 1   KVEMKPWYFWRNKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVVLLI 60
           KV++KPW+FW  K     + +      +   R   FNG  EP SD+YVA+V  EEVVLL+
Sbjct: 71  KVDLKPWHFWYKKGYKSFEVEGNQVDVYWDFRSAKFNGGPEPSSDFYVALVSEEEVVLLL 130

Query: 61  GDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINVNTN 120
           GD KK AF++T  RP+L++  L  KKE+VFGKK+FSTR +FH++ + H I +E       
Sbjct: 131 GDHKKKAFKRTKSRPSLVDAALFYKKENVFGKKIFSTRAKFHDRKREHEIVVE------- 190

Query: 121 PSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            S + + +PE+ + +DG   +++++L WKFRGN
Sbjct: 191 -SSTGAKEPEMWISVDGIVLVQVRNLQWKFRGN 215

Query: 181  240
           
Sbjct: 251  215

Query: 241  300
           
Sbjct: 311  215

Query: 301  360
           
Sbjct: 371  215

Query: 361  420
           
Sbjct: 431  215

Query: 421  460
           
Sbjct: 491  215

[Close]

BLAST of WMU72531 vs. TAIR10
Match: AT2G04220.1 (AT2G04220.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 130.6 bits (327), Expect = 8.4e-31
Identity = 71/156 (45.51%), Postives = 97/156 (62.18%), Query Frame = -3


Query: 1   KVEMKPWYFWRNK---VLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KV++KPW+FW  K      +    VE++  F +++   F    EP SD+YVA+V  EEVV
Sbjct: 75  KVDLKPWHFWNKKGYKSFDVEGNPVEVYWDFRSAK---FTSSPEPSSDFYVALVSEEEVV 134

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LL+GD KK AF++T  RPAL+E  L  KKE+VFGKK F+TR +F+++ K H I +E    
Sbjct: 135 LLVGDYKKKAFKRTKSRPALVEAALFYKKENVFGKKCFTTRAKFYDRKKEHEIIVE---- 194

Query: 121 NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
               S S   +PE+ + IDG   I++K+L WKFRGN
Sbjct: 195 ---SSTSGPKEPEMWISIDGIVLIQVKNLQWKFRGN 220

Query: 181  240
           
Sbjct: 255  220

Query: 241  300
           
Sbjct: 315  220

Query: 301  360
           
Sbjct: 375  220

Query: 361  420
           
Sbjct: 435  220

Query: 421  460
           
Sbjct: 495  220

[Close]

BLAST of WMU72531 vs. TAIR10
Match: AT5G48270.1 (AT5G48270.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = -3


Query: 1   MKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVVLLI 60
           +KPW FW    +K   +    VE++    ++++   NG  EP SDYYVAVV  EEVVLL+
Sbjct: 90  VKPWQFWSKRGSKSFDVEGNFVEVFWDLRSAKLAG-NGSPEPVSDYYVAVVSDEEVVLLL 149

Query: 61  GDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINVNTN 120
           GDLK+ A+++T  RPAL+E  +  KKE +FGKK FSTR +F E+ K H + +E       
Sbjct: 150 GDLKQKAYKRTKSRPALVEGFIYFKKESIFGKKTFSTRARFDEQRKEHEVVVE------- 209

Query: 121 PSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            S + + +PE+ + +DG   + +K+L WKFRGN
Sbjct: 210 -SSNGAAEPEMWISVDGIVVVNVKNLQWKFRGN 233

Query: 181  240
           
Sbjct: 270  233

Query: 241  300
           
Sbjct: 330  233

Query: 301  360
           
Sbjct: 390  233

Query: 361  420
           
Sbjct: 450  233

Query: 421  451
           
Sbjct: 510  233

[Close]

BLAST of WMU72531 vs. TAIR10
Match: AT5G28150.1 (AT5G28150.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVE+KPW F +   +K L      ++++    +++   F    E    +YV VV  +E+V
Sbjct: 74  KVEIKPWLFTKRKGSKSLEAYSCNIDVFWDLSSAK---FGSGPEALGGFYVGVVVDKEMV 133

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LL+GD+KK+AF+KT   P+ +    ++KKEHVFGK++F+T+ Q    GK H + IE    
Sbjct: 134 LLLGDMKKEAFKKTNASPSSLGAVFIAKKEHVFGKRVFATKAQLFADGKFHDLLIE---C 193

Query: 121 NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
           +TN +     DP L +R+DG+  +++K L WKFRGN
Sbjct: 194 DTNVT-----DPCLVVRVDGKTLLQVKRLKWKFRGN 218

Query: 181  240
           
Sbjct: 254  218

Query: 241  300
           
Sbjct: 314  218

Query: 301  360
           
Sbjct: 374  218

Query: 361  420
           
Sbjct: 434  218

Query: 421  460
           
Sbjct: 494  218

[Close]

BLAST of WMU72531 vs. TAIR10
Match: AT3G04860.1 (AT3G04860.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-25
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVE+KPW F +   +K L      ++++    +++   F    EP   +YV VV  +E+V
Sbjct: 74  KVEIKPWLFTKRKGSKTLEAYACNIDVFWDLSSAK---FGSSPEPLGGFYVGVVVDKEMV 133

Query: 61  LLIGDLKKDAFRKTGCRP-ALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFIN 120
           LL+GD+KK+AF+KT   P + +    ++KKEHVFGK+ F+T+ QF   GK H + IE   
Sbjct: 134 LLLGDMKKEAFKKTNAAPSSSLGAVFIAKKEHVFGKRTFATKAQFSGDGKTHDLVIE--- 193

Query: 121 VNTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
              + S S   DP L +R+DG+  ++++ LHWKFRGN
Sbjct: 194 --CDTSLS---DPCLIVRVDGKILMQVQRLHWKFRGN 219

Query: 181  240
           
Sbjct: 254  219

Query: 241  300
           
Sbjct: 314  219

Query: 301  360
           
Sbjct: 374  219

Query: 361  420
           
Sbjct: 434  219

Query: 421  460
           
Sbjct: 494  219

[Close]

BLAST of WMU72531 vs. NCBI nr
Match: gi|700207208|gb|KGN62327.1| (hypothetical protein Csa_2G349610 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-65
Identity = 130/157 (82.80%), Postives = 136/157 (86.62%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVEMKPWYFWR   +K   +    V++ +W    +   FNGETEPQSDYYVAVVC EEVV
Sbjct: 76  KVEMKPWYFWRKQGSKHFEVEGRAVDV-VW--DLKSAKFNGETEPQSDYYVAVVCEEEVV 135

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV
Sbjct: 136 LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 195

Query: 121 -NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            NTNPS SDSFDPELEMRIDGQPAIKIKHLHWKFRGN
Sbjct: 196 NNTNPSLSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 229

Query: 181  240
           
Sbjct: 256  229

Query: 241  300
           
Sbjct: 316  229

Query: 301  360
           
Sbjct: 376  229

Query: 361  420
           
Sbjct: 436  229

Query: 421  460
           
Sbjct: 496  229

[Close]

BLAST of WMU72531 vs. NCBI nr
Match: gi|778670571|ref|XP_011649496.1| (PREDICTED: uncharacterized protein LOC101209288 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-65
Identity = 130/157 (82.80%), Postives = 136/157 (86.62%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVEMKPWYFWR   +K   +    V++ +W    +   FNGETEPQSDYYVAVVC EEVV
Sbjct: 492 KVEMKPWYFWRKQGSKHFEVEGRAVDV-VW--DLKSAKFNGETEPQSDYYVAVVCEEEVV 551

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV
Sbjct: 552 LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 611

Query: 121 -NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            NTNPS SDSFDPELEMRIDGQPAIKIKHLHWKFRGN
Sbjct: 612 NNTNPSLSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 645

Query: 181  240
           
Sbjct: 672  645

Query: 241  300
           
Sbjct: 732  645

Query: 301  360
           
Sbjct: 792  645

Query: 361  420
           
Sbjct: 852  645

Query: 421  460
           
Sbjct: 912  645

[Close]

BLAST of WMU72531 vs. NCBI nr
Match: gi|659087292|ref|XP_008444373.1| (PREDICTED: uncharacterized protein LOC103487722 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-65
Identity = 130/157 (82.80%), Postives = 136/157 (86.62%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVEMKPWYFWR   +K   +    V++ +W    +   FNGETEPQSDYYVAVVC EEVV
Sbjct: 539 KVEMKPWYFWRKQGSKHFEVEGRAVDV-VW--DLKSAKFNGETEPQSDYYVAVVCEEEVV 598

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV
Sbjct: 599 LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 658

Query: 121 -NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            NTNPS SDSFDPELEMRIDGQPAIKIKHLHWKFRGN
Sbjct: 659 NNTNPSLSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 692

Query: 181  240
           
Sbjct: 719  692

Query: 241  300
           
Sbjct: 779  692

Query: 301  360
           
Sbjct: 839  692

Query: 361  420
           
Sbjct: 899  692

Query: 421  460
           
Sbjct: 959  692

[Close]

BLAST of WMU72531 vs. NCBI nr
Match: gi|719976906|ref|XP_010248684.1| (PREDICTED: uncharacterized protein LOC104591523 [Nelumbo nucifera])

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = -3


Query: 1   KVEMKPWYFWRNKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVVLLI 60
           KVE+KPWYFWR +       + +    F   +   FNGETEPQSDYYVAV C +EVVLL+
Sbjct: 536 KVELKPWYFWRKQGSKRFMVEGKAVDIFWDLKAAKFNGETEPQSDYYVAVACEDEVVLLL 595

Query: 61  GDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFIN---- 120
           GDLKKDA+RKTGCRPALIEP++VSKKEH+FGKK  ++R++FHEKG+LH ISIEF N    
Sbjct: 596 GDLKKDAYRKTGCRPALIEPSMVSKKEHIFGKKKLTSRVKFHEKGRLHEISIEFNNSSSS 655

Query: 121 -VNTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
            VNTN S    FDPE+E+++DG+ AI +KHLHWKFRGN
Sbjct: 656 SVNTN-SCVGGFDPEMEIKVDGKLAIHVKHLHWKFRGN 692

Query: 181  240
           
Sbjct: 716  692

Query: 241  300
           
Sbjct: 776  692

Query: 301  360
           
Sbjct: 836  692

Query: 361  420
           
Sbjct: 896  692

Query: 421  460
           
Sbjct: 956  692

[Close]

BLAST of WMU72531 vs. NCBI nr
Match: gi|641863519|gb|KDO82205.1| (hypothetical protein CISIN_1g020915mg [Citrus sinensis])

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-50
Identity = 98/156 (62.82%), Postives = 120/156 (76.92%), Query Frame = -3


Query: 1   KVEMKPWYFWR---NKVLSILK*KVELWMWFGTSRVQNFNGETEPQSDYYVAVVCGEEVV 60
           KVE+KPWYFWR   +K +++    V++   F   +   FNGETEP+SDYYVA+VC EEVV
Sbjct: 76  KVELKPWYFWRKQGSKHITVDSRAVDI---FWDLKAAKFNGETEPRSDYYVAIVCEEEVV 135

Query: 61  LLIGDLKKDAFRKTGCRPALIEPTLVSKKEHVFGKKMFSTRIQFHEKGKLHTISIEFINV 120
           LL+GDLKKDAFRKTGCRP+LIEPTLVS+KEHVFGKK FSTR++F EK  LH IS+E  N 
Sbjct: 136 LLLGDLKKDAFRKTGCRPSLIEPTLVSRKEHVFGKKKFSTRVKFQEKAPLHDISVECNNN 195

Query: 121 NTNPSFSDSFDPELEMRIDGQPAIKIKHLHWKFRGN 180
               S    FDPELE+R+DG+ A+ ++HLHWKFRGN
Sbjct: 196 INCDSNLGGFDPELEIRVDGKRAVHVRHLHWKFRGN 228

Query: 181  240
           
Sbjct: 256  228

Query: 241  300
           
Sbjct: 316  228

Query: 301  360
           
Sbjct: 376  228

Query: 361  420
           
Sbjct: 436  228

Query: 421  460
           
Sbjct: 496  228

The following BLAST results are available for this feature:

BLAST of WMU72531 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12690.1	6.4e-31	43.14	Plant protein of unknown function (DUF868)	[more]
AT2G04220.1	8.4e-31	45.51	Plant protein of unknown function (DUF868)	[more]
AT5G48270.1	3.0e-28	43.14	Plant protein of unknown function (DUF868)	[more]
AT5G28150.1	5.3e-25	38.46	Plant protein of unknown function (DUF868)	[more]
AT3G04860.1	6.9e-25	39.49	Plant protein of unknown function (DUF868)	[more]

BLAST of WMU72531 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207208\|gb\|KGN62327.1\|	2.2e-65	82.80	hypothetical protein Csa_2G349610 [Cucumis sativus]	[more]
gi\|778670571\|ref\|XP_011649496.1\|	2.2e-65	82.80	PREDICTED: uncharacterized protein LOC101209288 [Cucumis sativus]	[more]
gi\|659087292\|ref\|XP_008444373.1\|	2.2e-65	82.80	PREDICTED: uncharacterized protein LOC103487722 [Cucumis melo]	[more]
gi\|719976906\|ref\|XP_010248684.1\|	2.0e-50	62.66	PREDICTED: uncharacterized protein LOC104591523 [Nelumbo nucifera]	[more]
gi\|641863519\|gb\|KDO82205.1\|	5.8e-50	62.82	hypothetical protein CISIN_1g020915mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008586	DUF868_pln

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla022739	Cla022739	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S3_0129149	S3_0129149	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008586	Protein of unknown function DUF868, plant	PFAM	PF05910	DUF868	coord: 3..147 score: 2.9
None	No IPR available	PANTHER	PTHR31972	FAMILY NOT NAMED	coord: 6..147 score: 5.3
None	No IPR available	PANTHER	PTHR31972:SF11	SUBFAMILY NOT NAMED	coord: 6..147 score: 5.3