WMU70547 (transcribed_cluster) Watermelon (97103) v1

NameWMU70547
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr0 : 13507820 .. 13508113 (-)
Sequence length295
The following sequences are available for this feature:

transcribed_cluster sequence

CTTGGCGAGGTTCTCGAGGAGCTTGCATGAGACTTTGTGGAAGAAAATGGAGGATTCACTGTCGAATTCGGTAGTGACTCGAATGGCGGGTCTCTTGGAGAAAAGGGAAAAAGGGGCGAAATTGGAGGAGGAGGAGGATCGAGAGATGGGGACGGGGAAGTGAGAGAAGGTAATTGGAATTGGGGTGTTGAGGAGCGGAGGATTCAAAGTCCGCCATTGAAATAGAAAGGATTAGGATATTTTGAAGCAAAAGAAGCAGAAGGGAGGAAATGAAGAATGGGATTTTTAGGATTTT
BLAST of WMU70547 vs. TAIR10
Match: AT2G43950.1 (AT2G43950.1 chloroplast outer envelope protein 37)

HSP 1 Score: 47.0 bits (110), Expect = 7.8e-06
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = -2

Query: 1  RPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          RP +RVT+EFDS+S +F +KVSCKL +NLA+
Sbjct: 52 RPKLRVTSEFDSDSLLFLNKVSCKLFDNLAK 82

Query: 61 94
          
Sbjct: 112 82

BLAST of WMU70547 vs. Swiss-Prot
Match: OEP37_PEA (Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07
Identity = 23/32 (71.88%), Postives = 29/32 (90.62%), Query Frame = -2

Query: 1  KRPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          KRPA+R+TTEFDSES++FFHK+SCK L++LA+
Sbjct: 35 KRPALRITTEFDSESTVFFHKISCKFLDSLAK 66

Query: 61 97
          
Sbjct: 95 66

BLAST of WMU70547 vs. NCBI nr
Match: gi|659097078|ref|XP_008449430.1| (PREDICTED: LOW QUALITY PROTEIN: outer envelope pore protein 37, chloroplastic [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-07
Identity = 29/32 (90.62%), Postives = 32/32 (100.00%), Query Frame = -2

Query: 1  KRPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          KRPAIRVT+EFDSESSIFFHKVSCKLL+NLA+
Sbjct: 44 KRPAIRVTSEFDSESSIFFHKVSCKLLDNLAK 75

Query: 61 97
          
Sbjct: 104 75

BLAST of WMU70547 vs. NCBI nr
Match: gi|449444675|ref|XP_004140099.1| (PREDICTED: outer envelope pore protein 37, chloroplastic [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-07
Identity = 29/32 (90.62%), Postives = 32/32 (100.00%), Query Frame = -2

Query: 1  KRPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          KRPAIRVT+EFDSESSIFFHKVSCKLL+NLA+
Sbjct: 43 KRPAIRVTSEFDSESSIFFHKVSCKLLDNLAK 74

Query: 61 97
          
Sbjct: 103 74

BLAST of WMU70547 vs. NCBI nr
Match: gi|593781723|ref|XP_007153902.1| (hypothetical protein PHAVU_003G074500g [Phaseolus vulgaris])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 24/32 (75.00%), Postives = 32/32 (100.00%), Query Frame = -2

Query: 1  KRPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          +RPA+RVT+EFDSES++FFHK+SCKLL+NLA+
Sbjct: 57 RRPALRVTSEFDSESAVFFHKISCKLLDNLAK 88

Query: 61 97
          
Sbjct: 117 88

BLAST of WMU70547 vs. NCBI nr
Match: gi|122220797|sp|Q4LDF9.1|OEP37_PEA (RecName: Full=Outer envelope pore protein 37, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 37 kDa; Short=PsOEP37; Flags: Precursor [Pisum sativum])

HSP 1 Score: 58.2 bits (139), Expect = 9.6e-06
Identity = 23/32 (71.88%), Postives = 31/32 (96.88%), Query Frame = -2

Query: 1  KRPAIRVTTEFDSESSIFFHKVSCKLLENLAQ 60
          KRPA+R+TTEFDSES++FFHK+SCK L++LA+
Sbjct: 35 KRPALRITTEFDSESTVFFHKISCKFLDSLAK 66

Query: 61 97
          
Sbjct: 95 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G43950.17.8e-0664.52 chloroplast outer envelope protein 37[more]
Match NameE-valueIdentityDescription
OEP37_PEA1.0e-0771.88Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
gi|659097078|ref|XP_008449430.1|3.0e-0790.63PREDICTED: LOW QUALITY PROTEIN: outer envelope pore protein 37, chloroplastic [C... [more]
gi|449444675|ref|XP_004140099.1|3.0e-0790.63PREDICTED: outer envelope pore protein 37, chloroplastic [Cucumis sativus][more]
gi|593781723|ref|XP_007153902.1|4.3e-0675.00hypothetical protein PHAVU_003G074500g [Phaseolus vulgaris][more]
gi|122220797|sp|Q4LDF9.1|OEP37_PEA9.6e-0671.88RecName: Full=Outer envelope pore protein 37, chloroplastic; AltName: Full=Chlor... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla000424Cla000424gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0058480S3_0058480EST