WMU70428 (transcribed_cluster) Watermelon (97103) v1

NameWMU70428
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMethionine gamma-lyase
LocationChr10 : 1522800 .. 1523149 (+)
Sequence length358
The following sequences are available for this feature:

transcribed_cluster sequence

ATGTCATGCTCAGGCAGCAGCACAAGCAGTGAAATGAGTGGACAAGAAAAGGAATTGGCTGGAATCTCACCGGGGCTCGTGAGAATGTCTATTGGATATATGGGTACATTGGAGCAAAAATGGAGCCAATTTGAGAAGGCTCTTGCCAAAAGTCCAAGACACGGGGCCTTTTCAATTTCCAACAATTAATTAATTATACATCGATTTTGAATCTCTTCTTTTATAAATTCGATCGGTTCGGTTCTTCATGGCTCCAAAACTGACAAAATCGAACCGACTTTCACCTTTAATATGTATAGACATTGTTTAATTATGAGTATGATGTTTTTTCTAAAAATTAAATGAATAAACGCATGTA
BLAST of WMU70428 vs. TAIR10
Match: AT1G64660.1 (AT1G64660.1 methionine gamma-lyase)

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 46  EKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 105
           +KE AGISPGLVRMS+GY+GTLEQKW+QFEKA  +
Sbjct: 406 QKEAAGISPGLVRMSVGYVGTLEQKWTQFEKAFLR 440

Query: 106 151
           
Sbjct: 466 440

BLAST of WMU70428 vs. Swiss-Prot
Match: MGL_ARATH (Methionine gamma-lyase OS=Arabidopsis thaliana GN=MGL PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-09
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 46  EKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 105
           +KE AGISPGLVRMS+GY+GTLEQKW+QFEKA  +
Sbjct: 406 QKEAAGISPGLVRMSVGYVGTLEQKWTQFEKAFLR 440

Query: 106 151
           
Sbjct: 466 440

BLAST of WMU70428 vs. NCBI nr
Match: gi|449456795|ref|XP_004146134.1| (PREDICTED: methionine gamma-lyase-like [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 1

Query: 40  GQEKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAKSPRHG 99
           G+E+ELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK   +G
Sbjct: 403 GEERELAGISPGLVRMSIGYMGTLEQKWSQFEKALAKVQDNG 444

Query: 100 159
           
Sbjct: 463 444

Query: 160 166
           
Sbjct: 523 444

BLAST of WMU70428 vs. NCBI nr
Match: gi|307136088|gb|ADN33936.1| (cystathionine gamma-synthase [Cucumis melo subsp. melo])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1

Query: 40  GQEKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 99
           G+E+ELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK
Sbjct: 370 GEERELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 406

Query: 100 151
           
Sbjct: 430 406

BLAST of WMU70428 vs. NCBI nr
Match: gi|659095405|ref|XP_008448562.1| (PREDICTED: methionine gamma-lyase-like [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1

Query: 40  GQEKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 99
           G+E+ELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK
Sbjct: 402 GEERELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 438

Query: 100 151
           
Sbjct: 462 438

BLAST of WMU70428 vs. NCBI nr
Match: gi|451811145|gb|AGF70153.1| (methionine gamma-lyase [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1

Query: 40  GQEKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 99
           G+E+ELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK
Sbjct: 402 GEERELAGISPGLVRMSIGYMGTLEQKWSQFEKALAK 438

Query: 100 151
           
Sbjct: 462 438

BLAST of WMU70428 vs. NCBI nr
Match: gi|703112738|ref|XP_010100197.1| (Methionine gamma-lyase [Morus notabilis])

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 1

Query: 43  QEKELAGISPGLVRMSIGYMGTLEQKWSQFEKALAKSPRHGAFS 102
           +EK+LAGISPGLVRMS+GY+GTLEQKWSQFEKA+++    G F+
Sbjct: 405 EEKQLAGISPGLVRMSVGYVGTLEQKWSQFEKAISRLQDSGLFN 448

Query: 103 162
           
Sbjct: 465 448

Query: 163 175
           
Sbjct: 525 448

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G64660.12.9e-1077.14 methionine gamma-lyase[more]
Match NameE-valueIdentityDescription
MGL_ARATH5.1e-0977.14Methionine gamma-lyase OS=Arabidopsis thaliana GN=MGL PE=1 SV=1[more]
Match NameE-valueIdentityDescription
gi|449456795|ref|XP_004146134.1|1.9e-1185.71PREDICTED: methionine gamma-lyase-like [Cucumis sativus][more]
gi|307136088|gb|ADN33936.1|4.2e-1194.59cystathionine gamma-synthase [Cucumis melo subsp. melo][more]
gi|659095405|ref|XP_008448562.1|4.2e-1194.59PREDICTED: methionine gamma-lyase-like [Cucumis melo][more]
gi|451811145|gb|AGF70153.1|4.2e-1194.59methionine gamma-lyase [Cucumis melo][more]
gi|703112738|ref|XP_010100197.1|1.0e-0970.45Methionine gamma-lyase [Morus notabilis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
IPR015422PyrdxlP-dep_Trfase_dom1
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla008888Cla008888gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0054420S3_0054420EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePANTHERPTHR11808TRANS-SULFURATION ENZYME FAMILY MEMBERcoord: 1..53
score: 4.1
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2GENE3DG3DSA:3.90.1150.10coord: 3..49
score: 5.
NoneNo IPR availablePANTHERPTHR11808:SF55SUBFAMILY NOT NAMEDcoord: 1..53
score: 4.1