WMU68606 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU68606
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 11642105 .. 11642395 (-)
Sequence length300
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TAGGATACAACCATAGAGGCAGAAGGATTGTTAGGAAGAAGAGGAACGGGTGAAGTCTTGTGTCATACAGGACTCGGTTTTTCTGTTTCCTGCTGGCTACCACGCTCCTCGTCACTTCCTTGACCCCCCTTGATATCCATTCTGACAAAAAATACTTAGTTTTACTGAAGGCAAATTCTTTTTGGCTTTCCGACTACCTTCAACCTTCCATAGATCCCAAAACTCGGGTTTTCGGTGGAGGAGTTGCCTCTGCAATTGGAGCAACAAGTCCAGGCTTCCCATCATCAATAACTTCATCGA
Homology
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BLAST of WMU68606 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = -3 

Query: 203 DEVIDDGKPGLVAPIAEATPPPKTRV--LGSMEG 262
           D VIDDGKPGL+API + TPPPKT+V  L  +EG
Sbjct: 253 DAVIDDGKPGLIAPIGDGTPPPKTKVWDLWKVEG 286

Query: 263  299
           
Sbjct: 313  286


HSP 2 Score: 39.3 bits (90), Expect = 1.7e-03
Identity = 18/33 (54.55%), Postives = 20/33 (60.61%), Query Frame = -1 

Query: 133 KPEFWDLWKVEGSRKAKKNLPSVKLSIFCQNGY 192
           K + WDLWKVEG++K   NLPS +     QNGY
Sbjct: 275 KTKVWDLWKVEGTKKDNTNLPSER--SMTQNGY 305

Query: 193  232
           
Sbjct: 335  305

The following BLAST results are available for this feature:
BLAST of WMU68606 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66670.11.6e-0667.65 CLP protease proteolytic subunit 3[more]
BLAST of WMU68606 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013153Cla013153gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0186808S2_0186808EST