WMU68320 (transcribed_cluster) Watermelon (97103) v1

NameWMU68320
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEarly nodulin-like protein 11
LocationChr8 : 22989422 .. 22989667 (+)
Sequence length249
The following sequences are available for this feature:

transcribed_cluster sequence

ATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAAGGGCCAGAAGCTGATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTTCGGCGCCTTTCTCCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGG
BLAST of WMU68320 vs. TAIR10
Match: AT2G25060.1 (AT2G25060.1 early nodulin-like protein 14)

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-06
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQGPEADRCGCDSSPQVHRHLFGAFLPAESE-GPAVA 71
           G  K+     GPFYFISGA GHCE+G +        SP+ H  +  A  P E E GPA+A
Sbjct: 99  GETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI--SPR-HSVISPAPSPVEFEDGPALA 158

Query: 72  PSSGAANLKVGLLAVIVGIL 131
           P+  + ++++G   V++G++
Sbjct: 159 PAPISGSVRLGGCYVVLGLV 175

Query: 132 191
           
Sbjct: 219 175

Query: 192 249
           
Sbjct: 279 175

BLAST of WMU68320 vs. TAIR10
Match: AT4G31840.1 (AT4G31840.1 early nodulin-like protein 15)

HSP 1 Score: 47.8 bits (112), Expect = 3.8e-06
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQGPEADRCGCDSSPQVHRHLFGAFLPAESEGPAVAP 71
           G  K+     GP YF+SG +GHC++G +        +P+      G   P+E +GPAVAP
Sbjct: 95  GNTKVKLDQAGPVYFVSGTEGHCQKGQKLRLVVI--TPRNSAFSPGP-SPSEFDGPAVAP 154

Query: 72  SSGAANLKVGLLAVIVGIL 131
           +SGAA L  G  +V+ G++
Sbjct: 155 TSGAAKL-AGGFSVVFGLV 169

Query: 132 191
           
Sbjct: 215 169

Query: 192 249
           
Sbjct: 275 169

BLAST of WMU68320 vs. NCBI nr
Match: gi|659088994|ref|XP_008445271.1| (PREDICTED: early nodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 50/88 (56.82%), Postives = 53/88 (60.23%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQG---------PEADRCGCDSSPQVHRHLFGAFLPA 71
           G  K+    PGPFYFISGAKGHCEQG         P     G   +P           PA
Sbjct: 92  GKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVLTPRRRFIGISPAPS----------PA 151

Query: 72  ESEGPAVAPSSGAANLKVGLLAVIVGIL 131
           ESEGPAVAPSSGAANLKVG LAV+VGIL
Sbjct: 152 ESEGPAVAPSSGAANLKVGFLAVVVGIL 169

Query: 132 191
           
Sbjct: 212 169

Query: 192 249
           
Sbjct: 272 169

BLAST of WMU68320 vs. NCBI nr
Match: gi|449441860|ref|XP_004138700.1| (PREDICTED: early nodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 50/88 (56.82%), Postives = 53/88 (60.23%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQG---------PEADRCGCDSSPQVHRHLFGAFLPA 71
           G  K+    PGPFYFISGAKGHCEQG         P     G   +P           PA
Sbjct: 94  GKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPS----------PA 153

Query: 72  ESEGPAVAPSSGAANLKVGLLAVIVGIL 131
           ESEGPAVAPSSGA NLKVGLLAV+VGIL
Sbjct: 154 ESEGPAVAPSSGAGNLKVGLLAVVVGIL 171

Query: 132 191
           
Sbjct: 214 171

Query: 192 249
           
Sbjct: 274 171

BLAST of WMU68320 vs. NCBI nr
Match: gi|645227754|ref|XP_008220668.1| (PREDICTED: early nodulin-like protein 1 [Prunus mume])

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-09
Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQGPEADRCGCDSSPQVHRHLFGAFLPAESEGPAVAP 71
           G  KL    PGPFYFISG KGHCE+G +        +P+ H  +  A  PAE +GPAVAP
Sbjct: 98  GETKLHLDKPGPFYFISGTKGHCEKGQKV--IVVVMTPRKHYGISPAPSPAEVDGPAVAP 157

Query: 72  SSGAANLKVGLLAVIVGI 131
           +S A +L+ GLL V  GI
Sbjct: 158 TSSATSLQGGLLVVAFGI 173

Query: 132 191
           
Sbjct: 218 173

Query: 192 246
           
Sbjct: 278 173

BLAST of WMU68320 vs. NCBI nr
Match: gi|596194587|ref|XP_007223558.1| (hypothetical protein PRUPE_ppa012204mg [Prunus persica])

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-08
Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 3

Query: 12  GIRKLSYRGPGPFYFISGAKGHCEQGPEADRCGCDSSPQVHRHLFGAFLPAESEGPAVAP 71
           G  KL    PGPFYFISG KGHCE+G          +P+ H  +  A  PAE +GPAVAP
Sbjct: 98  GETKLHLDQPGPFYFISGTKGHCEKGQRV--IVVVMTPRKHYGISPAPSPAEVDGPAVAP 157

Query: 72  SSGAANLKVGLLAVIVGI 131
           +S A +L+ GLL V  GI
Sbjct: 158 TSSATSLQGGLLVVAFGI 173

Query: 132 191
           
Sbjct: 218 173

Query: 192 246
           
Sbjct: 278 173

BLAST of WMU68320 vs. NCBI nr
Match: gi|694356854|ref|XP_009359114.1| (PREDICTED: early nodulin-like protein 1 [Pyrus x bretschneideri])

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-08
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 3

Query: 3   LRMGIRKLSYRGPGPFYFISGAKGHCEQGPEADRCGCDSSPQVHRHLFGAFLPA-ESEGP 62
           L+ G  KL    PGP+YFISG KGHCE+G +        +P+ H  +  A  PA E +GP
Sbjct: 95  LKDGETKLHLDQPGPYYFISGTKGHCEKGQKL--VVVVMTPRKHLGISPAPSPAGEVDGP 154

Query: 63  AVAPSSGAANLKVGLLAVI 122
           A+AP+SGAA+LK G+L V+
Sbjct: 155 AIAPTSGAASLKGGVLTVV 171

Query: 123 182
           
Sbjct: 215 171

Query: 183 237
           
Sbjct: 275 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G25060.11.3e-0638.75 early nodulin-like protein 14[more]
AT4G31840.13.8e-0637.97 early nodulin-like protein 15[more]
Match NameE-valueIdentityDescription
gi|659088994|ref|XP_008445271.1|1.1e-1356.82PREDICTED: early nodulin-like protein 1 [Cucumis melo][more]
gi|449441860|ref|XP_004138700.1|1.1e-1356.82PREDICTED: early nodulin-like protein 1 [Cucumis sativus][more]
gi|645227754|ref|XP_008220668.1|7.8e-0950.00PREDICTED: early nodulin-like protein 1 [Prunus mume][more]
gi|596194587|ref|XP_007223558.1|1.0e-0850.00hypothetical protein PRUPE_ppa012204mg [Prunus persica][more]
gi|694356854|ref|XP_009359114.1|3.0e-0848.10PREDICTED: early nodulin-like protein 1 [Pyrus x bretschneideri][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla022365Cla022365gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0181146S2_0181146EST