WMU67981 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU67981
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr5 : 2761585 .. 2761996 (-)
Sequence length	411

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTTCGTAGTATCCAAACGTATCGTCACCAAAAGTGAGGTTGTTCATACAACCTTGGGAACAGGCACATGCCTGAAATGCTGTGAGTATGACATCGGTTATTCGCTGAGAAGTGAGAACGTTTCCCCCTACAATCGCAGCCTTCTCGCTCGGGGAAAGGAATGAGCCTGGTGGAATATATATCTTGACAGGAGCCAAGCAGCCTTGGTTGAGAGGAATATCGACATCGACCATGCAGCGAAGGCAGTATATAACTGCTGCCACTGTTACTGCTTCTGGAGCGTTCCAATTGCCATATACTTCTGGACTCGTTCCACTAAAATCAAAATTGGCTTCGCCTTTATTGAGGATCAATTGTGAGTTTCAAATGAATTACAGAACCATCATCCATGTAATCTCTTCTTCGATTGTTA

Library


Library category	ESTs
watermelon fruit 18d library	1

Homology

[Close]

BLAST of WMU67981 vs. TAIR10
Match: AT5G37830.1 (AT5G37830.1 oxoprolinase 1)

HSP 1 Score: 220.7 bits (561), Expect = 5.5e-58
Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            +KGEA+FDF+GTSPEVYGNWNAPEAVT AAVIYCLRC+V+VDIPLNQGCLAPV+I IP G
Sbjct: 1014 DKGEASFDFTGTSPEVYGNWNAPEAVTSAAVIYCLRCLVNVDIPLNQGCLAPVEIRIPAG 1073

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPSEKAA+VGGNVLTSQR+TDV+LTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1074 SFLSPSEKAAVVGGNVLTSQRVTDVVLTAFQACACSQGCMNNLTFGDDTFGYYE 1127

Query: 122   181
            
Sbjct: 1134  1127

Query: 182   241
            
Sbjct: 1194  1127

Query: 242   301
            
Sbjct: 1254  1127

Query: 302   344
            
Sbjct: 1314  1127

HSP 2 Score: 37.4 bits (85), Expect = 8.6e-03
Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = -2


Query: 318  RRDYMDDGSVIHLKLTIDPQ*RRSQF*F 377
              DYMDDGS+IHLKLTID     + F F
Sbjct: 995  EEDYMDDGSIIHLKLTIDADKGEASFDF 1022

Query: 378   402
            
Sbjct: 1055  1022

[Close]

BLAST of WMU67981 vs. Swiss-Prot
Match: OPLA_ARATH (5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.8e-57
Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            +KGEA+FDF+GTSPEVYGNWNAPEAVT AAVIYCLRC+V+VDIPLNQGCLAPV+I IP G
Sbjct: 1014 DKGEASFDFTGTSPEVYGNWNAPEAVTSAAVIYCLRCLVNVDIPLNQGCLAPVEIRIPAG 1073

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPSEKAA+VGGNVLTSQR+TDV+LTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1074 SFLSPSEKAAVVGGNVLTSQRVTDVVLTAFQACACSQGCMNNLTFGDDTFGYYE 1127

Query: 122   181
            
Sbjct: 1134  1127

Query: 182   241
            
Sbjct: 1194  1127

Query: 242   301
            
Sbjct: 1254  1127

Query: 302   344
            
Sbjct: 1314  1127

HSP 2 Score: 37.4 bits (85), Expect = 1.5e-01
Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = -2


Query: 318  RRDYMDDGSVIHLKLTIDPQ*RRSQF*F 377
              DYMDDGS+IHLKLTID     + F F
Sbjct: 995  EEDYMDDGSIIHLKLTIDADKGEASFDF 1022

Query: 378   402
            
Sbjct: 1055  1022

[Close]

BLAST of WMU67981 vs. Swiss-Prot
Match: OPLA_HUMAN (5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3)

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-42
Identity = 82/118 (69.49%), Postives = 95/118 (80.51%), Query Frame = -3


Query: 2    QLILNKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIY 61
            Q+ L++G A FDFSGT PEV+GN NAP AVT++A+IYCLRC+V  DIPLNQGCLAPV++ 
Sbjct: 1001 QISLSQGSAVFDFSGTGPEVFGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVV 1060

Query: 62   IPPGSFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            IP GS L PS +AA+VGGNVLTSQR+ DVIL AF ACA SQGCMNN+T G+   GYYE
Sbjct: 1061 IPRGSILDPSPEAAVVGGNVLTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYE 1118

Query: 122   181
            
Sbjct: 1121  1118

Query: 182   241
            
Sbjct: 1181  1118

Query: 242   301
            
Sbjct: 1241  1118

Query: 302   356
            
Sbjct: 1301  1118

[Close]

BLAST of WMU67981 vs. Swiss-Prot
Match: OPLA_MOUSE (5-oxoprolinase OS=Mus musculus GN=Oplah PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.9e-42
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = -3


Query: 2    QLILNKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIY 61
            Q+ LN+G A FDFSG+  EV+GN NAP A+T++A+IYCLRC+V  DIPLNQGCLAPV++ 
Sbjct: 1001 QINLNQGSAVFDFSGSGSEVFGNLNAPRAITLSALIYCLRCLVGRDIPLNQGCLAPVQVI 1060

Query: 62   IPPGSFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            IP GS L PS +AA+VGGNVLTSQR+ DVIL AF ACA SQGCMNN+T G+   GYYE
Sbjct: 1061 IPKGSILDPSPEAAVVGGNVLTSQRVVDVILGAFGACAASQGCMNNVTLGNARMGYYE 1118

Query: 122   181
            
Sbjct: 1121  1118

Query: 182   241
            
Sbjct: 1181  1118

Query: 242   301
            
Sbjct: 1241  1118

Query: 302   356
            
Sbjct: 1301  1118

[Close]

BLAST of WMU67981 vs. Swiss-Prot
Match: OPLA_BOVIN (5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-41
Identity = 79/118 (66.95%), Postives = 94/118 (79.66%), Query Frame = -3


Query: 2    QLILNKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIY 61
            Q+ +++G A FDFSG+ PEV+GN NAP A+T++A+IYCLRC+V  DIPLNQGCLAPV++ 
Sbjct: 1001 QINMSQGSAVFDFSGSGPEVFGNLNAPRAITLSALIYCLRCLVGRDIPLNQGCLAPVRVV 1060

Query: 62   IPPGSFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            IP GS L PS  AA+VGGNVLTSQR+ DVIL AF ACA SQGCMNN+T G+   GYYE
Sbjct: 1061 IPKGSILDPSPDAAVVGGNVLTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYE 1118

Query: 122   181
            
Sbjct: 1121  1118

Query: 182   241
            
Sbjct: 1181  1118

Query: 242   301
            
Sbjct: 1241  1118

Query: 302   356
            
Sbjct: 1301  1118

[Close]

BLAST of WMU67981 vs. Swiss-Prot
Match: YAOE_SCHPO (Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-40
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = -3


Query: 20   GEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPGSF 79
            G+A FDF GT PEVYGNWNAP A+T ++VIYCLR +++ DIPLN+GCL P++I IPP  F
Sbjct: 999  GDAVFDFEGTGPEVYGNWNAPIAITYSSVIYCLRSIINQDIPLNEGCLKPIEIRIPPSCF 1058

Query: 80   LSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDD 139
            L+PSE AA+VGGNVLTSQRITDVIL AF  CA SQGCMNNLTFG D
Sbjct: 1059 LNPSETAAVVGGNVLTSQRITDVILKAFSICAASQGCMNNLTFGYD 1104

Query: 140   199
            
Sbjct: 1119  1104

Query: 200   259
            
Sbjct: 1179  1104

Query: 260   319
            
Sbjct: 1239  1104

Query: 320   338
            
Sbjct: 1299  1104

[Close]

BLAST of WMU67981 vs. NCBI nr
Match: gi|659116894|ref|XP_008458316.1| (PREDICTED: 5-oxoprolinase [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-60
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            NKGEANFDFSGTSPEVYGNWNAPEAVT AAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG
Sbjct: 1014 NKGEANFDFSGTSPEVYGNWNAPEAVTAAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 1073

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1074 SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 1127

Query: 122   181
            
Sbjct: 1134  1127

Query: 182   241
            
Sbjct: 1194  1127

Query: 242   301
            
Sbjct: 1254  1127

Query: 302   344
            
Sbjct: 1314  1127

[Close]

BLAST of WMU67981 vs. NCBI nr
Match: gi|449441520|ref|XP_004138530.1| (PREDICTED: 5-oxoprolinase [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 7.2e-60
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            +KGEANFDFSGTSPEVYGNWNAPEAVT AAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG
Sbjct: 1014 HKGEANFDFSGTSPEVYGNWNAPEAVTAAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 1073

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1074 SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 1127

Query: 122   181
            
Sbjct: 1134  1127

Query: 182   241
            
Sbjct: 1194  1127

Query: 242   301
            
Sbjct: 1254  1127

Query: 302   344
            
Sbjct: 1314  1127

[Close]

BLAST of WMU67981 vs. NCBI nr
Match: gi|700190402|gb|KGN45606.1| (hypothetical protein Csa_6G000060 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 7.2e-60
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            +KGEANFDFSGTSPEVYGNWNAPEAVT AAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG
Sbjct: 1066 HKGEANFDFSGTSPEVYGNWNAPEAVTAAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 1125

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1126 SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 1179

Query: 122   181
            
Sbjct: 1186  1179

Query: 182   241
            
Sbjct: 1246  1179

Query: 242   301
            
Sbjct: 1306  1179

Query: 302   344
            
Sbjct: 1366  1179

[Close]

BLAST of WMU67981 vs. NCBI nr
Match: gi|470142954|ref|XP_004307154.1| (PREDICTED: 5-oxoprolinase [Fragaria vesca subsp. vesca])

HSP 1 Score: 235.0 bits (598), Expect = 8.0e-59
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = -3


Query: 2    KGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPGS 61
            KGEANFDFSGTSPEVYGNWNAPEAVT AAVIYCLRC+VDVDIPLNQGCLAPVKIYIPPGS
Sbjct: 1012 KGEANFDFSGTSPEVYGNWNAPEAVTAAAVIYCLRCLVDVDIPLNQGCLAPVKIYIPPGS 1071

Query: 62   FLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            FLSPS+KAA+VGGNVLTSQRITDV+LTAFQACACSQGCMNNLTFGDDTFGYYE
Sbjct: 1072 FLSPSDKAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDDTFGYYE 1124

Query: 122   181
            
Sbjct: 1132  1124

Query: 182   241
            
Sbjct: 1192  1124

Query: 242   301
            
Sbjct: 1252  1124

Query: 302   341
            
Sbjct: 1312  1124

[Close]

BLAST of WMU67981 vs. NCBI nr
Match: gi|645252441|ref|XP_008232124.1| (PREDICTED: 5-oxoprolinase [Prunus mume])

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58
Identity = 107/114 (93.86%), Postives = 113/114 (99.12%), Query Frame = -3


Query: 2    NKGEANFDFSGTSPEVYGNWNAPEAVTVAAVIYCLRCMVDVDIPLNQGCLAPVKIYIPPG 61
            +KGEANFDFSGTSPEVYGNWNAPEAVT AAVIYCLRC+VDVDIPLNQGCLAPVKIYIPPG
Sbjct: 1014 DKGEANFDFSGTSPEVYGNWNAPEAVTAAAVIYCLRCLVDVDIPLNQGCLAPVKIYIPPG 1073

Query: 62   SFLSPSEKAAIVGGNVLTSQRITDVILTAFQACACSQGCMNNLTFGDDTFGYYE 121
            SFLSPS+KAA+VGGNVLTSQRITDV+LTAFQACACSQGCMNNLTFGD+TFGYYE
Sbjct: 1074 SFLSPSDKAAVVGGNVLTSQRITDVVLTAFQACACSQGCMNNLTFGDETFGYYE 1127

Query: 122   181
            
Sbjct: 1134  1127

Query: 182   241
            
Sbjct: 1194  1127

Query: 242   301
            
Sbjct: 1254  1127

Query: 302   344
            
Sbjct: 1314  1127

The following BLAST results are available for this feature:

BLAST of WMU67981 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37830.1	5.5e-58	89.47	oxoprolinase 1	[more]

BLAST of WMU67981 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OPLA_ARATH	9.8e-57	89.47	5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1	[more]
OPLA_HUMAN	1.0e-42	69.49	5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3	[more]
OPLA_MOUSE	8.9e-42	67.80	5-oxoprolinase OS=Mus musculus GN=Oplah PE=1 SV=1	[more]
OPLA_BOVIN	1.2e-41	66.95	5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1	[more]
YAOE_SCHPO	1.3e-40	72.64	Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of WMU67981 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116894\|ref\|XP_008458316.1\|	1.9e-60	99.12	PREDICTED: 5-oxoprolinase [Cucumis melo]	[more]
gi\|449441520\|ref\|XP_004138530.1\|	7.2e-60	98.25	PREDICTED: 5-oxoprolinase [Cucumis sativus]	[more]
gi\|700190402\|gb\|KGN45606.1\|	7.2e-60	98.25	hypothetical protein Csa_6G000060 [Cucumis sativus]	[more]
gi\|470142954\|ref\|XP_004307154.1\|	8.0e-59	95.58	PREDICTED: 5-oxoprolinase [Fragaria vesca subsp. vesca]	[more]
gi\|645252441\|ref\|XP_008232124.1\|	1.8e-58	93.86	PREDICTED: 5-oxoprolinase [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR003692	Hydantoinase_B

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla021389	Cla021389	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S2_0174797	S2_0174797	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003692	Hydantoinase B/oxoprolinase	PFAM	PF02538	Hydantoinase_B	coord: 6..137 score: 7.2
None	No IPR available	PANTHER	PTHR11365	5-OXOPROLINASE RELATED	coord: 4..137 score: 4.0
None	No IPR available	PANTHER	PTHR11365:SF2	5-OXOPROLINASE	coord: 4..137 score: 4.0