WMU67954 (transcribed_cluster) Watermelon (97103) v1

NameWMU67954
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 11173281 .. 11173769 (+)
Sequence length490
The following sequences are available for this feature:

transcribed_cluster sequence

ACCTTGACAGTTTCTGGCAAGCCATTGATGGCGGCAAAGTTCAGGGCCTTGTCTAGTGATCGGCTGGCGATAGCAGAGATGGTGGAGTTGGGTGCTGAGTTTATGGCTCTGGCCACTTTTCTGGCAATCTCAGCGCAGCCGATGATGCCGAAAACGGATTGGGTTCTGGGCCATCTGTGGTTGCCGTCGGTGACTGAAGAGCTGGGAAAGGTGTGAAGAAATGGAAGGATTACAGCGGTGAGTATGGAAGAAAGAAGATGAAGTTATTTTGGGCTCATGAATTTGTGGATGGTGATATGCATGGTGGTTATTTGTGATTGGTTAAGGGAAGGATAAAAGCTGATATGGCAATATGGATTTTATATGGTTGAGATCCATGCTTCCTGTTTTTCTTATCACCCTTCTTTTTAGTTATGAGATTTTAGACACTTGTTTTCCTTTTATCAATTTTGTAGGTTTGAATGCTTGTCTATAACAATCATCTCCATGA
BLAST of WMU67954 vs. TAIR10
Match: AT4G09670.1 (AT4G09670.1 Oxidoreductase family protein)

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = -3

Query: 3   TQSVFGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           TQ   G++GCA+IARKV+RAI+ APN+TIS +ASRSL+KA  FA  N  PE+ K
Sbjct: 5   TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTK 58

Query: 63  122
           
Sbjct: 65  58

Query: 123 165
           
Sbjct: 125 58

BLAST of WMU67954 vs. Swiss-Prot
Match: Y4967_ARATH (Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.6e-11
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = -3

Query: 3   TQSVFGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           TQ   G++GCA+IARKV+RAI+ APN+TIS +ASRSL+KA  FA  N  PE+ K
Sbjct: 5   TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTK 58

Query: 63  122
           
Sbjct: 65  58

Query: 123 165
           
Sbjct: 125 58

BLAST of WMU67954 vs. NCBI nr
Match: gi|659112395|ref|XP_008456198.1| (PREDICTED: uncharacterized oxidoreductase At4g09670-like [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15
Identity = 44/50 (88.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 3   FGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           FGI+GCAEIARKVARAINSAPNS ++A+ASRSLDKALNFAA+NGLPETVK
Sbjct: 8   FGIVGCAEIARKVARAINSAPNSAVTAVASRSLDKALNFAAVNGLPETVK 57

Query: 63  122
           
Sbjct: 68  57

Query: 123 153
           
Sbjct: 128 57

BLAST of WMU67954 vs. NCBI nr
Match: gi|449445937|ref|XP_004140728.1| (PREDICTED: uncharacterized oxidoreductase At4g09670-like [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 6.5e-15
Identity = 43/50 (86.00%), Postives = 48/50 (96.00%), Query Frame = -3

Query: 3   FGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           FGI+GCAEIARKVARAINSAPNS ++A+ASRSLDKA NFAA+NGLPETVK
Sbjct: 8   FGIVGCAEIARKVARAINSAPNSAVTAVASRSLDKAFNFAAVNGLPETVK 57

Query: 63  122
           
Sbjct: 68  57

Query: 123 153
           
Sbjct: 128 57

BLAST of WMU67954 vs. NCBI nr
Match: gi|255585701|ref|XP_002533534.1| (PREDICTED: uncharacterized oxidoreductase At4g09670 [Ricinus communis])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = -3

Query: 3   FGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           FGI+GCA+I++KVARAIN APNST+SAIASRSLDKA  FA  N LP+ +K
Sbjct: 8   FGIMGCAKISKKVARAINLAPNSTLSAIASRSLDKAKQFATANELPDNIK 57

Query: 63  122
           
Sbjct: 68  57

Query: 123 153
           
Sbjct: 128 57

BLAST of WMU67954 vs. NCBI nr
Match: gi|823228144|ref|XP_012446843.1| (PREDICTED: uncharacterized oxidoreductase At4g09670 [Gossypium raimondii])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3

Query: 3   FGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           FGIIGCAEIARKV+RAI  APN+T+SA+ASRS DKA NFA  NG P   K
Sbjct: 8   FGIIGCAEIARKVSRAIQLAPNATVSAVASRSFDKAANFAKANGFPPDTK 57

Query: 63  122
           
Sbjct: 68  57

Query: 123 153
           
Sbjct: 128 57

BLAST of WMU67954 vs. NCBI nr
Match: gi|728812442|gb|KHG00820.1| (hypothetical protein F383_23243 [Gossypium arboreum])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -3

Query: 3   FGIIGCAEIARKVARAINSAPNSTISAIASRSLDKALNFAAINGLPETVK 62
           FGIIGCAEIARKV+RAI  APN+T+SA+ASRS DKA NFA  NG P   K
Sbjct: 8   FGIIGCAEIARKVSRAIQLAPNATVSAVASRSFDKAANFAKANGFPPDTK 57

Query: 63  122
           
Sbjct: 68  57

Query: 123 153
           
Sbjct: 128 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G09670.15.4e-1261.11 Oxidoreductase family protein[more]
Match NameE-valueIdentityDescription
Y4967_ARATH9.6e-1161.11Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE... [more]
Match NameE-valueIdentityDescription
gi|659112395|ref|XP_008456198.1|2.2e-1588.00PREDICTED: uncharacterized oxidoreductase At4g09670-like [Cucumis melo][more]
gi|449445937|ref|XP_004140728.1|6.5e-1586.00PREDICTED: uncharacterized oxidoreductase At4g09670-like [Cucumis sativus][more]
gi|255585701|ref|XP_002533534.1|6.3e-1072.00PREDICTED: uncharacterized oxidoreductase At4g09670 [Ricinus communis][more]
gi|823228144|ref|XP_012446843.1|6.3e-1072.00PREDICTED: uncharacterized oxidoreductase At4g09670 [Gossypium raimondii][more]
gi|728812442|gb|KHG00820.1|6.3e-1072.00hypothetical protein F383_23243 [Gossypium arboreum][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013123Cla013123gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0174412S2_0174412EST